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COMPOSITUM 1 (COM1) contributes to the architectural simplification of barley inflorescence via meristem identity signals

https://doi.org/10.1101/2020.02.18.952705

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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DBOP specifies palea development by suppressing the expansion of the margin of palea in rice

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How confident can we be that orthologs are similar, but paralogs differ?

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TCP genes: a family snapshot ten years later

inferredcites →https://doi.org/10.1016/s0065-2296(06)44011-8openalex-snapshot

Developmental Gene Evolution and the Origin of Grass Inflorescence Diversity

inferredcites →https://doi.org/10.1016/s0367-2530(17)30655-2openalex-snapshot

Some evolution trends in the inflorescence of Poaceae

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Architecture of floral branch systems in maize and related grasses

inferredcites →https://doi.org/10.1038/nature22043openalex-snapshot

A chromosome conformation capture ordered sequence of the barley genome

inferredcites →https://doi.org/10.1038/ng.3612openalex-snapshot

Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation

inferredcites →https://doi.org/10.1038/nmeth.4197openalex-snapshot

Salmon provides fast and bias-aware quantification of transcript expression

inferredcites →https://doi.org/10.1038/s41467-018-03238-4openalex-snapshot

MSD1 regulates pedicellate spikelet fertility in sorghum through the jasmonic acid pathway

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The scaffold proteins of lignin biosynthetic cytochrome P450 enzymes

inferredcites →https://doi.org/10.1038/sdata.2017.44openalex-snapshot

Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.

inferredcites →https://doi.org/10.1038/srep38488openalex-snapshot

Comparative phylogenomic analysis provides insights into TCP gene functions in Sorghum

inferredcites →https://doi.org/10.1046/j.1365-294x.2000.01020.xopenalex-snapshot

TCS: a computer program to estimate gene genealogies

inferredcites →https://doi.org/10.1073/pnas.0608580104openalex-snapshot

Six-rowed barley originated from a mutation in a homeodomain-leucine zipper I-class homeobox gene

inferredcites →https://doi.org/10.1073/pnas.1202439109openalex-snapshot

TCP transcription factor, BRANCH ANGLE DEFECTIVE 1 (BAD1), is required for normal tassel branch angle formation in maize

inferredcites →https://doi.org/10.1073/pnas.1221950110openalex-snapshot

Six-rowed spike4 ( Vrs4 ) controls spikelet determinacy and row-type in barley

inferredcites →https://doi.org/10.1093/aob/mcr059openalex-snapshot

High time for a roll call: gene duplication and phylogenetic relationships of TCP-like genes in monocots

inferredcites →https://doi.org/10.1093/aob/mcs246openalex-snapshot

Racemose inflorescences of monocots: structural and morphogenetic interaction at the flower/inflorescence level

inferredcites →https://doi.org/10.1093/aob/mct292openalex-snapshot

Function of xyloglucan endotransglucosylase/hydrolases in rice

inferredcites →https://doi.org/10.1093/bioinformatics/btp616openalex-snapshot

edgeR : a Bioconductor package for differential expression analysis of digital gene expression data

inferredcites →https://doi.org/10.1093/bioinformatics/btt656openalex-snapshot

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

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Plant cell wall extensibility: connecting plant cell growth with cell wall structure, mechanics, and the action of wall-modifying enzymes

inferredcites →https://doi.org/10.1093/jxb/erz103openalex-snapshot

Connected through the force: mechanical signals in plant development

inferredcites →https://doi.org/10.1101/gr.207837.116openalex-snapshot

The evolution of inflorescence diversity in the nightshades and heterochrony during meristem maturation

inferredcites →https://doi.org/10.1104/pp.108.128231openalex-snapshot

RETARDED PALEA1 Controls Palea Development and Floral Zygomorphy in Rice

inferredcites →https://doi.org/10.1104/pp.110.166249openalex-snapshot

Genetic Dissection of Barley Morphology and Development

inferredcites →https://doi.org/10.1104/pp.125.3.1198openalex-snapshot

Evolutionary History of the Grasses

inferredcites →https://doi.org/10.1104/pp.19.00248openalex-snapshot

Wheat TaSPL8 Modulates Leaf Angle Through Auxin and Brassinosteroid Signaling

inferredcites →https://doi.org/10.1105/tpc.106.048934openalex-snapshot

Arabidopsis BRANCHED1 Acts as an Integrator of Branching Signals within Axillary Buds

inferredcites →https://doi.org/10.1105/tpc.16.00373openalex-snapshot

A Sorghum Mutant Resource as an Efficient Platform for Gene Discovery in Grasses

inferredcites →https://doi.org/10.1111/hrd2.00077openalex-snapshot

Scandinavian mutation research in barley - a historical review

inferredcites →https://doi.org/10.1111/j.1365-313x.2008.03728.xopenalex-snapshot

HvLsi1 is a silicon influx transporter in barley

inferredcites →https://doi.org/10.1111/j.1365-313x.2009.04096.xopenalex-snapshot

The transcript elongation factor FACT affects Arabidopsis vegetative and reproductive development and genetically interacts with HUB1/2

inferredcites →https://doi.org/10.1111/j.1759-6831.2010.00087.xopenalex-snapshot

Disentangling confusions in inflorescence morphology: Patterns and diversity of reproductive shoot ramification in angiosperms

inferredcites →https://doi.org/10.1111/jipb.12771openalex-snapshot

Developmental pathways for shaping spike inflorescence architecture in barley and wheat

inferredcites →https://doi.org/10.1111/nph.14538openalex-snapshot

Grass inflorescence architecture and evolution: the origin of novel signaling centers

inferredcites →https://doi.org/10.1146/annurev-arplant-050213-040104openalex-snapshot

Molecular Control of Grass Inflorescence Development

inferredcites →https://doi.org/10.1146/annurev.arplant.37.1.377openalex-snapshot

Biophysical Control of Plant Cell Growth

inferredcites →https://doi.org/10.1186/1756-0500-2-258openalex-snapshot

TILLING in the two-rowed barley cultivar 'Barke' reveals preferred sites of functional diversity in the gene HvHox1

inferredcites →https://doi.org/10.1186/gb-2013-14-4-r36openalex-snapshot

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

inferredcites →https://doi.org/10.1242/dev.111955openalex-snapshot

Gene regulatory interactions at lateral organ boundaries in maize

inferredcites →https://doi.org/10.1371/journal.pgen.1006832openalex-snapshot

The Arabidopsis leucine-rich repeat receptor kinase MIK2/LRR-KISS connects cell wall integrity sensing, root growth and response to abiotic and biotic stresses

inferredcites →https://doi.org/10.1371/journal.pone.0065503openalex-snapshot

A TILLING Platform for Functional Genomics in Brachypodium distachyon

inferredcites →https://doi.org/10.1515/bmc-2012-0051openalex-snapshot

TCP transcription factors: architectures of plant form

inferredcites →https://doi.org/10.1534/genetics.115.176628openalex-snapshot

The Genetic Basis of Composite Spike Form in Barley and ‘Miracle-Wheat’

inferredcites →https://doi.org/10.3389/fpls.2013.00250openalex-snapshot

Early inflorescence development in the grasses (Poaceae)

inferredcites →https://doi.org/10.3389/fpls.2015.00324openalex-snapshot

Cell walls as a stage for intercellular communication regulating shoot meristem development

inferredcites →https://doi.org/10.3389/fpls.2018.01282openalex-snapshot

Genome-Wide Identification and Expression Profiling of the TCP Family Genes in Spike and Grain Development of Wheat (Triticum aestivum L.)

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s42994-020-00026-xopenalex-snapshot

Molecular and genetic pathways for optimizing spikelet development and grain yield

inferred← citeshttps://doi.org/10.1093/jxb/eraa416openalex-snapshot

A CYC/TB1-type TCP transcription factor controls spikelet meristem identity in barley

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