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Epigenetic transgenerational effects on RNAi in Arabidopsis

https://doi.org/10.1101/2020.04.05.026641
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00425-006-0366-1openalex-snapshot
A single transgene locus triggers both transcriptional and post-transcriptional silencing through double-stranded RNA production
inferredcites →https://doi.org/10.1016/0092-8674(89)90428-5openalex-snapshot
The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing
inferredcites →https://doi.org/10.1016/j.cell.2011.10.042openalex-snapshot
Transgenerational Inheritance of an Acquired Small RNA-Based Antiviral Response in C. elegans
inferredcites →https://doi.org/10.1016/j.celrep.2018.10.086openalex-snapshot
C. elegans Heterochromatin Factor SET-32 Plays an Essential Role in Transgenerational Establishment of Nuclear RNAi-Mediated Epigenetic Silencing
inferredcites →https://doi.org/10.1016/j.cub.2017.03.061openalex-snapshot
Transgenerational Inheritance: Perpetuating RNAi
inferredcites →https://doi.org/10.1016/j.devcel.2017.04.023openalex-snapshot
MORC-1 Integrates Nuclear RNAi and Transgenerational Chromatin Architecture to Promote Germline Immortality
inferredcites →https://doi.org/10.1016/j.molcel.2004.09.028openalex-snapshot
Endogenous trans-Acting siRNAs Regulate the Accumulation of Arabidopsis mRNAs
inferredcites →https://doi.org/10.1016/j.tplants.2005.04.009openalex-snapshot
Paramutation: an encounter leaving a lasting impression
inferredcites →https://doi.org/10.1016/s0065-2660(02)46007-5openalex-snapshot
6 Genomic imprinting during seed development
inferredcites →https://doi.org/10.1016/s0960-9822(00)00862-9openalex-snapshot
DNA methylation and chromatin structure affect transcriptional and post-transcriptional transgene silencing in Arabidopsis
inferredcites →https://doi.org/10.1016/s0960-9822(01)00226-3openalex-snapshot
RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1 for maintenance
inferredcites →https://doi.org/10.1023/a:1006443731515openalex-snapshot
RNA degradation and models for post-transcriptional gene silencing
inferredcites →https://doi.org/10.1038/420127aopenalex-snapshot
Epigenetic reprogramming: Back to the beginning
inferredcites →https://doi.org/10.1038/43657openalex-snapshot
An epigenetic mutation responsible for natural variation in floral symmetry
inferredcites →https://doi.org/10.1038/nature02874openalex-snapshot
RNA silencing in plants
inferredcites →https://doi.org/10.1038/nature04674openalex-snapshot
RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse
inferredcites →https://doi.org/10.1038/nature05022openalex-snapshot
Transgeneration memory of stress in plants
inferredcites →https://doi.org/10.1038/ng.1039openalex-snapshot
Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint
inferredcites →https://doi.org/10.1038/nrg1500openalex-snapshot
RNAi-mediated pathways in the nucleus
inferredcites →https://doi.org/10.1038/nrg1834openalex-snapshot
Inherited epigenetic variation — revisiting soft inheritance
inferredcites →https://doi.org/10.1038/s41477-018-0117-xopenalex-snapshot
Crosstalk between PTGS and TGS pathways in natural antiviral immunity and disease recovery
inferredcites →https://doi.org/10.1038/sj.ejhg.5201538openalex-snapshot
Sex-specific, male-line transgenerational responses in humans
inferredcites →https://doi.org/10.1046/j.1365-313x.1996.10030437.xopenalex-snapshot
Developmentally regulated silencing and reactivation of tobacco chitinase transgene expression
inferredcites →https://doi.org/10.1046/j.1365-313x.1997.00597.xopenalex-snapshot
Requirement of sense transcription for homology‐dependent virus resistance and trans‐inactivation
inferredcites →https://doi.org/10.1046/j.1365-313x.1998.00157.xopenalex-snapshot
Post‐transcriptional silencing of pectin methylesterase gene in transgenic tomato fruits results from impaired pre‐mRNA processing
inferredcites →https://doi.org/10.1046/j.1365-313x.1998.00343.xopenalex-snapshot
Floral dip: a simplified method for Agrobacterium ‐mediated transformation of Arabidopsis thaliana
inferredcites →https://doi.org/10.1046/j.1365-313x.2000.00793.xopenalex-snapshot
Developmentally and transgene regulated nuclear processing of primary transcripts of chalcone synthase A in petunia
inferredcites →https://doi.org/10.1046/j.1365-313x.2003.01810.xopenalex-snapshot
A gene encoding an RNase D exonuclease‐like protein is required for post‐transcriptional silencing in Arabidopsis
inferredcites →https://doi.org/10.1073/pnas.111423098openalex-snapshot
Sense- and antisense-mediated gene silencing in tobacco is inhibited by the same viral suppressors and is associated with accumulation of small RNAs
inferredcites →https://doi.org/10.1073/pnas.1219655110openalex-snapshot
Warm temperatures induce transgenerational epigenetic release of RNA silencing by inhibiting siRNA biogenesis in Arabidopsis
inferredcites →https://doi.org/10.1093/emboj/18.1.241openalex-snapshot
Production of aberrant promoter transcripts contributes to methylation and silencing of unlinked homologous promoters in trans
inferredcites →https://doi.org/10.1093/emboj/cdf464openalex-snapshot
Two classes of short interfering RNA in RNA silencing
inferredcites →https://doi.org/10.1093/jxb/eraa188openalex-snapshot
Epigenetics: possible applications in climate-smart crop breeding
inferredcites →https://doi.org/10.1093/jxb/eru450openalex-snapshot
Persistence and transgenerational effect of plant-mediated RNAi in aphids
inferredcites →https://doi.org/10.1093/oso/9780198540625.001.0001openalex-snapshot
Epigenetic Inheritance and Evolution
inferredcites →https://doi.org/10.1104/pp.103.023796openalex-snapshot
Epigenetic Switch from Posttranscriptional to Transcriptional Silencing Is Correlated with Promoter Hypermethylation
inferredcites →https://doi.org/10.1105/tpc.104.024547openalex-snapshot
Silencing in Arabidopsis T-DNA Transformants: The Predominant Role of a Gene-Specific RNA Sensing Mechanism versus Position Effects
inferredcites →https://doi.org/10.1105/tpc.9.8.1495openalex-snapshot
A Transcriptionally Active State Is Required for Post-Transcriptional Silencing (Cosuppression) of Nitrate Reductase Host Genes and Transgenes.
inferredcites →https://doi.org/10.1111/nph.14642openalex-snapshot
Transgenerational effects of mild heat in Arabidopsis thaliana show strong genotype specificity that is explained by climate at origin
inferredcites →https://doi.org/10.1126/science.1106910openalex-snapshot
RNA Polymerase IV Directs Silencing of Endogenous DNA
inferredcites →https://doi.org/10.1126/science.286.5441.950openalex-snapshot
A Species of Small Antisense RNA in Posttranscriptional Gene Silencing in Plants
inferredcites →https://doi.org/10.1126/science.287.5462.2494openalex-snapshot
Genetic Requirements for Inheritance of RNAi in C. elegans
inferredcites →https://doi.org/10.1146/annurev.arplant.51.1.167openalex-snapshot
(T RANS )G ENE S ILENCING IN P LANTS : How Many Mechanisms?
inferredcites →https://doi.org/10.1146/annurev.cellbio.21.122303.114706openalex-snapshot
RNA SILENCING SYSTEMS AND THEIR RELEVANCE TO PLANT DEVELOPMENT
inferredcites →https://doi.org/10.1146/annurev.genom.9.081307.164445openalex-snapshot
Transgenerational Epigenetic Effects
inferredcites →https://doi.org/10.1186/s13072-016-0052-xopenalex-snapshot
A transgenerational role of the germline nuclear RNAi pathway in repressing heat stress-induced transcriptional activation in C. elegans
inferredcites →https://doi.org/10.1242/dev.00856openalex-snapshot
Meiotic transmission of epigenetic changes in the cell-division factor requirement of plant cells
inferredcites →https://doi.org/10.1242/jeb.108340openalex-snapshot
A review of transgenerational epigenetics for RNAi, longevity, germline maintenance and olfactory imprinting in Caenorhabditis elegans
inferredcites →https://doi.org/10.1371/journal.pgen.0020049openalex-snapshot
Dynamic Reprogramming of DNA Methylation at an Epigenetically Sensitive Allele in Mice
inferredcites →https://doi.org/10.1534/genetics.108.089433openalex-snapshot
Transmission Dynamics of Heritable Silencing Induced by Double-Stranded RNA inCaenorhabditis elegans
inferredcites →https://doi.org/10.3390/ijms20225587openalex-snapshot
Transgenerational Response to Nitrogen Deprivation in Arabidopsis thaliana
inferredcites →https://doi.org/10.5860/choice.33-3293openalex-snapshot
Epigenetic inheritance and evolution: the Lamarckian dimension

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.pbi.2021.102014openalex-snapshot
The initiation of RNA interference (RNAi) in plants
inferred← citeshttps://doi.org/10.3390/plants10061093openalex-snapshot
Genetic Engineering of Lesquerella with Increased Ricinoleic Acid Content in Seed Oil
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