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Evolution leads to emergence: An analysis of protein interactomes across the tree of life
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/iub.489openalex-snapshot
How a neutral evolutionary ratchet can build cellular complexity
inferredcites →https://doi.org/10.1002/j.1538-7305.1948.tb01338.xopenalex-snapshot
A Mathematical Theory of Communication
inferredcites →https://doi.org/10.1007/s10539-018-9614-6openalex-snapshot
The generality of Constructive Neutral Evolution
inferredcites →https://doi.org/10.1016/0968-0004(82)90199-2openalex-snapshot
Prokaryotes and eukaryotes: strategies and successes
inferredcites →https://doi.org/10.1016/j.biocel.2008.08.041openalex-snapshot
Evolution of specificity in the eukaryotic endomembrane system
inferredcites →https://doi.org/10.1016/j.cell.2014.10.050openalex-snapshot
A Proteome-Scale Map of the Human Interactome Network
inferredcites →https://doi.org/10.1016/j.pbiomolbio.2013.03.019openalex-snapshot
Theoretical aspects of Systems Biology
inferredcites →https://doi.org/10.1038/ismej.2014.60openalex-snapshot
Implications of streamlining theory for microbial ecology
inferredcites →https://doi.org/10.1038/nature04209openalex-snapshot
Towards a proteome-scale map of the human protein–protein interaction network
inferredcites →https://doi.org/10.1038/nature04531openalex-snapshot
Introns and the origin of nucleus–cytosol compartmentalization
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.48openalex-snapshot
A new view of the tree of life
inferredcites →https://doi.org/10.1038/nrg1272openalex-snapshot
Network biology: understanding the cell's functional organization
inferredcites →https://doi.org/10.1038/nrmicro1932openalex-snapshot
Carbon catabolite repression in bacteria: many ways to make the most out of nutrients
inferredcites →https://doi.org/10.1038/s41580-019-0127-1openalex-snapshot
A call for a better understanding of causation in cell biology
inferredcites →https://doi.org/10.1073/pnas.1314922110openalex-snapshot
Quantifying causal emergence shows that macro can beat micro
inferredcites →https://doi.org/10.1073/pnas.1818013116openalex-snapshot
Evolution of resilience in protein interactomes across the tree of life
inferredcites →https://doi.org/10.1073/pnas.231499798openalex-snapshot
Degeneracy and complexity in biological systems
inferredcites →https://doi.org/10.1073/pnas.96.6.3257openalex-snapshot
Measures of degeneracy and redundancy in biological networks
inferredcites →https://doi.org/10.1073/pnas.96.7.3801openalex-snapshot
Horizontal gene transfer among genomes: The complexity hypothesis
inferredcites →https://doi.org/10.1091/mbc.e13-12-0756openalex-snapshot
Implications of Big Data for cell biology
inferredcites →https://doi.org/10.1093/nar/gkq973openalex-snapshot
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
inferredcites →https://doi.org/10.1093/nar/gkw937openalex-snapshot
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
inferredcites →https://doi.org/10.1098/rspb.1981.0003openalex-snapshot
On the stochastic properties of single ion channels
inferredcites →https://doi.org/10.1103/physreve.77.046119openalex-snapshot
Robustness of community structure in networks
inferredcites →https://doi.org/10.1103/physreve.78.015101openalex-snapshot
Maximum likelihood: Extracting unbiased information from complex networks
inferredcites →https://doi.org/10.1126/science.1089072openalex-snapshot
Biological Networks: The Tinkerer as an Engineer
inferredcites →https://doi.org/10.1126/science.1089118openalex-snapshot
Molecular Networks: The Top-Down View
inferredcites →https://doi.org/10.1126/science.1227946openalex-snapshot
How Information Theory Handles Cell Signaling and Uncertainty
inferredcites →https://doi.org/10.1155/2020/8932526openalex-snapshot
The Emergence of Informative Higher Scales in Complex Networks
inferredcites →https://doi.org/10.1186/1742-4682-7-6openalex-snapshot
Degeneracy: a link between evolvability, robustness and complexity in biological systems
inferredcites →https://doi.org/10.1186/1745-6150-6-35openalex-snapshot
Energetics and genetics across the prokaryote-eukaryote divide
inferredcites →https://doi.org/10.21236/ada292214openalex-snapshot
On the Performance of Spectral Graph Partitioning Methods.
inferredcites →https://doi.org/10.3390/e19050188openalex-snapshot
When the Map Is Better Than the Territory
inferredcites →https://doi.org/10.48550/arxiv.1908.07565openalex-snapshot
Finding the right scale of a network: Efficient identification of causal emergence through spectral clustering
inferredcites →https://doi.org/10.5555/313651.313702openalex-snapshot
On the performance of spectral graph partitioning methods
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/s12038-023-00344-4openalex-snapshot
What distinguishes the elephant from E. coli: Causal spreading and the biological principles of metazoan complexity
inferred← citeshttps://doi.org/10.1007/s12304-025-09613-1openalex-snapshot
Something Critical Occurs at a Fractional Dimension Between Two and Three... A Proposal for Knitting Together Semiophysics and Biosemiotics
inferred← citeshttps://doi.org/10.1016/j.anbehav.2022.04.015openalex-snapshot
Interactions and information: Exploring task allocation in ant colonies using network analysis
inferred← citeshttps://doi.org/10.1080/19420889.2020.1802914openalex-snapshot
Emergence of informative higher scales in biological systems: a computational toolkit for optimal prediction and control
inferred← citeshttps://doi.org/10.1093/cz/zoaa077openalex-snapshot
A framework to evaluate whether to pool or separate behaviors in a multilayer network
inferred← citeshttps://doi.org/10.1098/rsta.2021.0150openalex-snapshot
Emergence as the conversion of information: a unifying theory
inferred← citeshttps://doi.org/10.17760/d20399933openalex-snapshot
Constructing, comparing, and reconstructing networks
inferred← citeshttps://doi.org/10.20944/preprints202105.0394.v1openalex-snapshot
Exploring patterns in modularity of protein interaction networks across the tree of life using Spectral Entropy
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