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Phenotypic plasticity underlies local invasion and distant metastasis in colon cancer

https://doi.org/10.1101/2020.07.24.219238

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Wnt/β-catenin signaling in cancer stemness and malignant behavior

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The Epithelial-Mesenchymal Transition Generates Cells with Properties of Stem Cells

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Stochastic State Transitions Give Rise to Phenotypic Equilibrium in Populations of Cancer Cells

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EMT: 2016

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EMT Subtype Influences Epithelial Plasticity and Mode of Cell Migration

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Interplay between microRNAs and WNT/β-catenin signalling pathway regulates epithelial–mesenchymal transition in cancer

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Mesenchymal Stem Cells Induce Epithelial to Mesenchymal Transition in Colon Cancer Cells through Direct Cell-to-Cell Contact

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Epithelial-to-Mesenchymal Transition: Epigenetic Reprogramming Driving Cellular Plasticity

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Patterning and Nuclear β-Catenin Expression in the Colonic Adenoma-Carcinoma Sequence

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The Hallmarks of Cancer

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Genetic instability in colorectal cancers

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Metastasis genes: A progression puzzle

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The ZEB/miR‐200 feedback loop—a motor of cellular plasticity in development and cancer?

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Transition loses its invasive edge

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Cell plasticity in epithelial homeostasis and tumorigenesis

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Stromal contribution to the colorectal cancer transcriptome

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Stromal gene expression defines poor-prognosis subtypes in colorectal cancer

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Poor-prognosis colon cancer is defined by a molecularly distinct subtype and develops from serrated precursor lesions

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The consensus molecular subtypes of colorectal cancer

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Migrating cancer stem cells — an integrated concept of malignant tumour progression

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Molecular mechanisms of epithelial–mesenchymal transition

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Dynamic epigenetic regulation of the microRNA-200 family mediates epithelial and mesenchymal transitions in human tumorigenesis

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ZEB1 and TCF4 reciprocally modulate their transcriptional activities to regulate Wnt target gene expression

inferredcites →https://doi.org/10.1038/onc.2016.60openalex-snapshot

Collagen-rich stroma in aggressive colon tumors induces mesenchymal gene expression and tumor cell invasion

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Integrative multi-omics analysis of a colon cancer cell line with heterogeneous Wnt activity revealed RUNX2 as an epigenetic regulator of EMT

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Click beetle luciferase mutant and near infrared naphthyl-luciferins for improved bioluminescence imaging

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Context specificity of the EMT transcriptional response

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Identification of the tumour transition states occurring during EMT

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Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer

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β-catenin activation down-regulates cell-cell junction-related genes and induces epithelial-to-mesenchymal transition in colorectal cancers

inferredcites →https://doi.org/10.1073/pnas.1108977108openalex-snapshot

β-catenin/TCF4 complex induces the epithelial-to-mesenchymal transition (EMT)-activator ZEB1 to regulate tumor invasiveness

inferredcites →https://doi.org/10.1073/pnas.1701219114openalex-snapshot

Genetic dissection of colorectal cancer progression by orthotopic transplantation of engineered cancer organoids

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β-Catenin mutations in cell lines established from human colorectal cancers

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STAR: ultrafast universal RNA-seq aligner

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Trimmomatic: a flexible trimmer for Illumina sequence data

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LGR5 positivity defines stem-like cells in colorectal cancer

inferredcites →https://doi.org/10.1093/nar/30.1.207openalex-snapshot

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

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GENCODE: The reference human genome annotation for The ENCODE Project

inferredcites →https://doi.org/10.1126/science.1228522openalex-snapshot

Circulating Breast Tumor Cells Exhibit Dynamic Changes in Epithelial and Mesenchymal Composition

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Mutations of Chromosome 5q21 Genes in FAP and Colorectal Cancer Patients

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Abstract 5317: Non-invasive dynamic bioluminescence imaging of tumor functional vascular changes during antiangiogenic therapy in conscious mice

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Bioconductor: open software development for computational biology and bioinformatics

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

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APC dosage effects in tumorigenesis and stem cell differentiation

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On the Adaptive Control of the False Discovery Rate in Multiple Testing With Independent Statistics

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Implications of the Hybrid Epithelial/Mesenchymal Phenotype in Metastasis

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Cell Heterogeneity and Phenotypic Plasticity in Metastasis Formation: The Case of Colon Cancer

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Expression of Secreted Protein Acidic and Rich in Cysteine in the Stroma of a Colorectal Carcinoma is Associated With Patient Prognosis

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Single-vector inducible lentiviral RNAi system for oncology target validation

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