On the public citation graph

Population genomics unravels the Holocene history of Triticum-Aegilops species

https://doi.org/10.1101/2022.04.07.487499

0 signed · 90 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/jasc.2000.0569openalex-snapshot

FOCUS: Estimated Wheat Yields During the Emergence of Agriculture Based on the Carbon Isotope Discrimination of Grains: Evidence from a 10th Millennium BP Site on the Euphrates

inferredcites →https://doi.org/10.1007/978-94-007-7572-5_18openalex-snapshot

Wheat Domestication: Key to Agricultural Revolutions Past and Future

inferredcites →https://doi.org/10.1007/bf02294050openalex-snapshot

Redundancy Analysis an Alternative for Canonical Correlation Analysis

inferredcites →https://doi.org/10.1007/s00122-006-0474-0openalex-snapshot

The structure of wild and domesticated emmer wheat populations, gene flow between them, and the site of emmer domestication

inferredcites →https://doi.org/10.1007/s00122-007-0603-4openalex-snapshot

A Pseudo-Response Regulator is misexpressed in the photoperiod insensitive Ppd-D1a mutant of wheat (Triticum aestivum L.)

inferredcites →https://doi.org/10.1007/s10584-011-0148-zopenalex-snapshot

The representative concentration pathways: an overview

inferredcites →https://doi.org/10.1007/s12571-013-0263-yopenalex-snapshot

Crops that feed the world 10. Past successes and future challenges to the role played by wheat in global food security

inferredcites →https://doi.org/10.1007/s42994-021-00047-0openalex-snapshot

Wheat speciation and adaptation: perspectives from reticulate evolution

inferredcites →https://doi.org/10.1016/j.cub.2018.05.066openalex-snapshot

The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes

inferredcites →https://doi.org/10.1016/j.cub.2019.05.053openalex-snapshot

Evolutionary Insights into the Nature of Plant Domestication

inferredcites →https://doi.org/10.1016/j.pbi.2019.12.006openalex-snapshot

Climate change and the need for agricultural adaptation

inferredcites →https://doi.org/10.1016/j.quaint.2013.07.044openalex-snapshot

The origins of wheat in China and potential pathways for its introduction: A review

inferredcites →https://doi.org/10.1016/j.quascirev.2018.12.017openalex-snapshot

From ecological opportunism to multi-cropping: Mapping food globalisation in prehistory

inferredcites →https://doi.org/10.1038/nature22043openalex-snapshot

A chromosome conformation capture ordered sequence of the barley genome

inferredcites →https://doi.org/10.1038/nature24486openalex-snapshot

Genome sequence of the progenitor of the wheat D genome Aegilops tauschii

inferredcites →https://doi.org/10.1038/ng.3464openalex-snapshot

Visualizing spatial population structure with estimated effective migration surfaces

inferredcites →https://doi.org/10.1038/ng.3748openalex-snapshot

Robust and scalable inference of population history from hundreds of unphased whole genomes

inferredcites →https://doi.org/10.1038/ng.3845openalex-snapshot

Cassava haplotype map highlights fixation of deleterious mutations during clonal propagation

inferredcites →https://doi.org/10.1038/nplants.2016.22openalex-snapshot

Global conservation priorities for crop wild relatives

inferredcites →https://doi.org/10.1038/nrg3605openalex-snapshot

Evolution of crop species: genetics of domestication and diversification

inferredcites →https://doi.org/10.1038/nrg817openalex-snapshot

Genetics and geography of wild cereal domestication in the near east

inferredcites →https://doi.org/10.1038/s41467-018-02974-xopenalex-snapshot

No evidence that carotenoid pigments boost either immune or antioxidant defenses in a songbird

inferredcites →https://doi.org/10.1038/s41467-019-09078-0openalex-snapshot

SMARCAD1 ATPase activity is required to silence endogenous retroviruses in embryonic stem cells

inferredcites →https://doi.org/10.1038/s41467-019-13889-6openalex-snapshot

PHD1 controls muscle mTORC1 in a hydroxylation-independent manner by stabilizing leucyl tRNA synthetase

inferredcites →https://doi.org/10.1038/s41477-018-0141-xopenalex-snapshot

The early history of wheat in China from 14C dating and Bayesian chronological modelling

inferredcites →https://doi.org/10.1038/s41477-019-0581-yopenalex-snapshot

5,200-year-old cereal grains from the eastern Altai Mountains redate the trans-Eurasian crop exchange

inferredcites →https://doi.org/10.1038/s41477-020-0659-6openalex-snapshot

Genomic history and ecology of the geographic spread of rice

inferredcites →https://doi.org/10.1038/s41477-021-00934-wopenalex-snapshot

Introgressing the Aegilops tauschii genome into wheat as a basis for cereal improvement

inferredcites →https://doi.org/10.1038/s41559-021-01526-9openalex-snapshot

The evolutionary genomics of species’ responses to climate change

inferredcites →https://doi.org/10.1038/s41586-018-0108-0openalex-snapshot

Genome sequence of the progenitor of wheat A subgenome Triticum urartu

inferredcites →https://doi.org/10.1038/s41586-019-1679-0openalex-snapshot

Genetic strategies for improving crop yields

inferredcites →https://doi.org/10.1038/s41587-019-0152-9openalex-snapshot

Breeding crops to feed 10 billion

inferredcites →https://doi.org/10.1038/s41587-021-01058-4openalex-snapshot

Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement

inferredcites →https://doi.org/10.1038/s41588-019-0381-3openalex-snapshot

Durum wheat genome highlights past domestication signatures and future improvement targets

inferredcites →https://doi.org/10.1038/s41588-019-0382-2openalex-snapshot

Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome

inferredcites →https://doi.org/10.1038/s41588-019-0393-zopenalex-snapshot

Tracing the ancestry of modern bread wheats

inferredcites →https://doi.org/10.1038/s41588-020-00722-wopenalex-snapshot

Triticum population sequencing provides insights into wheat adaptation

inferredcites →https://doi.org/10.1038/s41598-021-92851-3openalex-snapshot

Genomic epidemiology of SARS-CoV-2 in the UAE reveals novel virus mutation, patterns of co-infection and tissue specific host immune response

inferredcites →https://doi.org/10.1086/519795openalex-snapshot

PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses

inferredcites →https://doi.org/10.1093/bioinformatics/btr330openalex-snapshot

The variant call format and VCFtools

inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

inferredcites →https://doi.org/10.1093/bioinformatics/btx048openalex-snapshot

admixturegraph: an R package for admixture graph manipulation and fitting

inferredcites →https://doi.org/10.1093/gigascience/giy162openalex-snapshot

A near-chromosome-scale genome assembly of the gemsbok ( Oryx gazella ): an iconic antelope of the Kalahari desert

inferredcites →https://doi.org/10.1093/molbev/mss075openalex-snapshot

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

inferredcites →https://doi.org/10.1093/nar/gkw290openalex-snapshot

Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

inferredcites →https://doi.org/10.1093/pcp/pcr018openalex-snapshot

Evolution of Polyploid Triticum Wheats under Cultivation: The Role of Domestication, Natural Hybridization and Allopolyploid Speciation in their Diversification

inferredcites →https://doi.org/10.1101/gr.094052.109openalex-snapshot

Fast model-based estimation of ancestry in unrelated individuals

inferredcites →https://doi.org/10.1101/gr.100545.109openalex-snapshot

Population differentiation as a test for selective sweeps

inferredcites →https://doi.org/10.1111/1755-0998.13230openalex-snapshot

Applying f 4 ‐statistics and admixture graphs: Theory and examples

inferredcites →https://doi.org/10.1111/1755-0998.13374openalex-snapshot

Experimental support for genomic prediction of climate maladaptation using the machine learning approach Gradient Forests

inferredcites →https://doi.org/10.1111/ele.12376openalex-snapshot

Ecological genomics meets community‐level modelling of biodiversity: mapping the genomic landscape of current and future environmental adaptation

inferredcites →https://doi.org/10.1111/j.1469-8137.2009.03099.xopenalex-snapshot

Discovery, evaluation and distribution of haplotypes of the wheat Ppd‐D1 gene

inferredcites →https://doi.org/10.1111/nph.12164openalex-snapshot

Aegilops tauschii single nucleotide polymorphisms shed light on the origins of wheat D‐genome genetic diversity and pinpoint the geographic origin of hexaploid wheat

inferredcites →https://doi.org/10.1126/sciadv.aav0536openalex-snapshot

Worldwide phylogeography and history of wheat genetic diversity

inferredcites →https://doi.org/10.1126/sciadv.aav9188openalex-snapshot

Pervasive hybridizations in the history of wheat relatives

inferredcites →https://doi.org/10.1126/science.1124635openalex-snapshot

How Fast Was Wild Wheat Domesticated?

inferredcites →https://doi.org/10.1126/science.1250092openalex-snapshot

Ancient hybridizations among the ancestral genomes of bread wheat

inferredcites →https://doi.org/10.1126/science.aaf7671openalex-snapshot

The broad footprint of climate change from genes to biomes to people

inferredcites →https://doi.org/10.1126/science.aag2773openalex-snapshot

Precipitation drives global variation in natural selection

inferredcites →https://doi.org/10.1126/science.aan0032openalex-snapshot

Wild emmer genome architecture and diversity elucidate wheat evolution and domestication

inferredcites →https://doi.org/10.1126/science.aan4380openalex-snapshot

Genomic signals of selection predict climate-driven population declines in a migratory bird

inferredcites →https://doi.org/10.1126/science.aao4776openalex-snapshot

The evolutionary history of dogs in the Americas

inferredcites →https://doi.org/10.1126/science.aar7191openalex-snapshot

Shifting the limits in wheat research and breeding using a fully annotated reference genome

inferredcites →https://doi.org/10.1126/science.aaw2090openalex-snapshot

Genomic architecture and introgression shape a butterfly radiation

inferredcites →https://doi.org/10.1146/annurev-arplant-080720-090632openalex-snapshot

Natural Variation in Crops: Realized Understanding, Continuing Promise

inferredcites →https://doi.org/10.1146/annurev.ecolsys.110308.120159openalex-snapshot

Species Distribution Models: Ecological Explanation and Prediction Across Space and Time

inferredcites →https://doi.org/10.1177/0959683616650268openalex-snapshot

Between China and South Asia: A Middle Asian corridor of crop dispersal and agricultural innovation in the Bronze Age

inferredcites →https://doi.org/10.1186/1471-2105-5-1openalex-snapshot

PyEvolve: a toolkit for statistical modelling of molecular evolution

inferredcites →https://doi.org/10.1186/1471-2105-9-1openalex-snapshot

Evaluation of time profile reconstruction from complex two-color microarray designs

inferredcites →https://doi.org/10.1186/s12859-019-2669-9openalex-snapshot

ElemCor: accurate data analysis and enrichment calculation for high-resolution LC-MS stable isotope labeling experiments

inferredcites →https://doi.org/10.1186/s13059-019-1744-xopenalex-snapshot

Frequent intra- and inter-species introgression shapes the landscape of genetic variation in bread wheat

inferredcites →https://doi.org/10.1371/journal.pcbi.1005944openalex-snapshot

MUMmer4: A fast and versatile genome alignment system

inferredcites →https://doi.org/10.1371/journal.pgen.1003905openalex-snapshot

Robust Demographic Inference from Genomic and SNP Data

inferredcites →https://doi.org/10.1371/journal.pone.0066428openalex-snapshot

Yield Trends Are Insufficient to Double Global Crop Production by 2050

inferredcites →https://doi.org/10.1534/genetics.112.145037openalex-snapshot

Ancient Admixture in Human History

inferredcites →https://doi.org/10.1534/genetics.113.152462openalex-snapshot

Robust Identification of Local Adaptation from Allele Frequencies

inferredcites →https://doi.org/10.1534/genetics.115.183913openalex-snapshot

Admixture, Population Structure, and F -Statistics

inferredcites →https://doi.org/10.1890/11-0252.1openalex-snapshot

Gradient forests: calculating importance gradients on physical predictors

inferredcites →https://doi.org/10.6084/m9.figshare.963153.v1openalex-snapshot

Aligning sequence reads, clone sequences and assembly con*gs with BWA-MEM

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/advs.202524067openalex-snapshot

Introgressed Variation in TaMYB7‐A1 Drives Graded Dormancy and Climate‐Adaptive Pre‐Harvest Sprouting Resistance in Wheat

inferred← citeshttps://doi.org/10.1007/s11427-022-2178-7openalex-snapshot

Wheat genomic study for genetic improvement of traits in China

inferred← citeshttps://doi.org/10.1007/s42729-024-01640-0openalex-snapshot

Fascinating Role of Silicon dioxide Nanoparticles and Co-inoculation of Mycorrhiza and Rhizobacteria to Combat NaCl Stress: Changes in Physiological Characteristics, Uptake of Nutrient Elements, and Enhancing Photosystem II Activities in Wheat

inferred← citeshttps://doi.org/10.1007/s42729-025-02819-9openalex-snapshot

Unraveling the Protective Roles of Silicon and Thiourea on Salinity Stress Tolerance of Triticum Aestivum L. Cultivars: from Antioxidant Defense To Photosynthetic Recovery

inferred← citeshttps://doi.org/10.1101/2022.11.04.515153openalex-snapshot

Modest transcriptomic response to polyploidization in allohexaploid wheat synthetics

inferred← citeshttps://doi.org/10.1111/tpj.17011openalex-snapshot

Structural variation discovery in wheat using PacBio high‐fidelity sequencing

inferred← citeshttps://doi.org/10.1186/s12864-023-09324-2openalex-snapshot

Low impact of polyploidization on the transcriptome of synthetic allohexaploid wheat

inferred← citeshttps://doi.org/10.1371/journal.pbio.3002235openalex-snapshot

Diamonds in the not-so-rough: Wild relative diversity hidden in crop genomes

inferred← citeshttps://doi.org/10.6084/m9.figshare.26588784openalex-snapshot

Additional file 1 of Low impact of polyploidization on the transcriptome of synthetic allohexaploid wheat

inferred← citeshttps://doi.org/10.6084/m9.figshare.26588787openalex-snapshot

Additional file 2 of Low impact of polyploidization on the transcriptome of synthetic allohexaploid wheat

inferred← citeshttps://doi.org/10.6084/m9.figshare.26588790openalex-snapshot

Additional file 3 of Low impact of polyploidization on the transcriptome of synthetic allohexaploid wheat

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.