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Quantitative whole-tissue 3D imaging reveals bacteria in close association with mouse jejunum mucosa

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Measuring the Formaldehyde Protein–DNA Cross-Link Reversal Rate
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The two mucus layers of colon are organized by the MUC2 mucin, whereas the outer layer is a legislator of host–microbial interactions
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High-fat diet modifies the PPAR-γ pathway leading to disruption of microbial and physiological ecosystem in murine small intestine
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Coxiella burnetii inhibits host immunity by a protein phosphatase adapted from glycolysis
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Formaldehyde Crosslinking: A Tool for the Study of Chromatin Complexes
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Malnutrition as an enteric infectious disease with long-term effects on child development
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Deficiency of TRPM2 leads to embryonic neurogenesis defects in hyperthermia
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Bacterial Overgrowth in the Cystic Fibrosis Transmembrane Conductance Regulator Null Mouse Small Intestine
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Abnormal Paneth cell granule dissolution and compromised resistance to bacterial colonization in the intestine of CF mice
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The adherent gastrointestinal mucus gel layer: thickness and physical state in vivo
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Contributions of tropodithietic acid and biofilm formation to the probiotic activity of Phaeobacter inhibens
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Genomic and transcriptomic comparison between Staphylococcus aureus strains associated with high and low within herd prevalence of intra-mammary infection
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Rapid identification of capsulated Acinetobacter baumannii using a density-dependent gradient test
inferredcites →https://doi.org/10.1186/s40168-020-0785-4openalex-snapshot
Self-reinoculation with fecal flora changes microbiota density and composition leading to an altered bile-acid profile in the mouse small intestine
inferredcites →https://doi.org/10.1186/s40168-021-01010-3openalex-snapshot
Hybrid assembly of an agricultural slurry virome reveals a diverse and stable community with the potential to alter the metabolism and virulence of veterinary pathogens
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Single-molecule RNA detection at depth by hybridization chain reaction and tissue hydrogel embedding and clearing
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Mechanisms of erythrocyte development and regeneration: implications for regenerative medicine and beyond
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Surface area of the digestive tract – revisited
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Current Sampling Methods for Gut Microbiota: A Call for More Precise Devices
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Introduction to the proceedings of the 5th International Invasive Sea Squirt Conference, 2014
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Ileocecal valve dysfunction in small intestinal bacterial overgrowth: A pilot study
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Irritable bowel syndrome and small intestinal bacterial overgrowth: Meaningful association or unnecessary hype
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