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Autophagy restricts fungal accommodation in the roots of Arabidopsis thaliana

https://doi.org/10.1101/2023.07.21.550010

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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/9780470988855.ch7openalex-snapshot

Developmental and Hormonal Control of Leaf Senescence

inferredcites →https://doi.org/10.1007/978-1-0716-2079-3_14openalex-snapshot

Monitoring Cell Death Via Ion Leakage and PAM Fluorometry

inferredcites →https://doi.org/10.1007/s11557-012-0880-4openalex-snapshot

Enigmatic Sebacinales

inferredcites →https://doi.org/10.1016/j.cell.2009.02.036openalex-snapshot

Autophagic Components Contribute to Hypersensitive Cell Death in Arabidopsis

inferredcites →https://doi.org/10.1016/j.celrep.2017.10.029openalex-snapshot

The mTORC1 Signaling Network Senses Changes in Cellular Purine Nucleotide Levels

inferredcites →https://doi.org/10.1016/j.chom.2024.10.020openalex-snapshot

A nucleoside signal generated by a fungal endophyte regulates host cell death and promotes root colonization

inferredcites →https://doi.org/10.1016/j.pbi.2017.04.017openalex-snapshot

Autophagy as an emerging arena for plant–pathogen interactions

inferredcites →https://doi.org/10.1016/j.pbi.2017.08.011openalex-snapshot

Autophagy as a mediator of life and death in plants

inferredcites →https://doi.org/10.1016/j.pbi.2019.07.002openalex-snapshot

Contrasting and emerging roles of autophagy in plant immunity

inferredcites →https://doi.org/10.1016/j.semcdb.2009.04.012openalex-snapshot

Autophagy and plant innate immunity: Defense through degradation

inferredcites →https://doi.org/10.1016/j.tplants.2023.01.013openalex-snapshot

Interplay between autophagy and proteasome during protein turnover

inferredcites →https://doi.org/10.1038/cdd.2011.37openalex-snapshot

Programmed cell death in the plant immune system

inferredcites →https://doi.org/10.1038/cdd.2014.50openalex-snapshot

The plant metacaspase AtMC1 in pathogen-triggered programmed cell death and aging: functional linkage with autophagy

inferredcites →https://doi.org/10.1038/nature05286openalex-snapshot

The plant immune system

inferredcites →https://doi.org/10.1073/pnas.0605697103openalex-snapshot

The root endophytic fungus Piriformospora indica requires host cell death for proliferation during mutualistic symbiosis with barley

inferredcites →https://doi.org/10.1073/pnas.1301653110openalex-snapshot

Host-related metabolic cues affect colonization strategies of a root endophyte

inferredcites →https://doi.org/10.1073/pnas.1805622115openalex-snapshot

Staphylococcus aureus targets the purine salvage pathway to kill phagocytes

inferredcites →https://doi.org/10.1074/jbc.m204630200openalex-snapshot

The APG8/12-activating Enzyme APG7 Is Required for Proper Nutrient Recycling and Senescence in Arabidopsis thaliana

inferredcites →https://doi.org/10.1074/jbc.m304768200openalex-snapshot

Equilibrative Nucleoside Transporters of Arabidopsis thaliana

inferredcites →https://doi.org/10.1080/15548627.2017.1415189openalex-snapshot

Exploring autophagy with Gene Ontology

inferredcites →https://doi.org/10.1080/15548627.2020.1797280openalex-snapshot

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) 1

inferredcites →https://doi.org/10.1093/jxb/eraa410openalex-snapshot

TOR mediates the autophagy response to altered nucleotide homeostasis in an RNase mutant

inferredcites →https://doi.org/10.1094/mpmi-11-11-0291openalex-snapshot

Opprimo ergo sum—Evasion and Suppression in the Root Endophytic Fungus Piriformospora indica

inferredcites →https://doi.org/10.1101/2023.12.29.572992openalex-snapshot

Time-resolved transcriptomics reveal a mechanism of host niche defense: beneficial root endophytes deploy a host-protective antimicrobial GH18-CBM5 chitinase

inferredcites →https://doi.org/10.1104/pp.010843openalex-snapshot

Evidence Supporting a Role of Jasmonic Acid in Arabidopsis Leaf Senescence

inferredcites →https://doi.org/10.1104/pp.011024openalex-snapshot

Leaf Senescence and Starvation-Induced Chlorosis Are Accelerated by the Disruption of an Arabidopsis Autophagy Gene

inferredcites →https://doi.org/10.1104/pp.105.060673openalex-snapshot

Autophagic Nutrient Recycling in Arabidopsis Directed by the ATG8 and ATG12 Conjugation Pathways

inferredcites →https://doi.org/10.1104/pp.106.092106openalex-snapshot

Degradation of Oxidized Proteins by Autophagy during Oxidative Stress in Arabidopsis

inferredcites →https://doi.org/10.1104/pp.108.130013openalex-snapshot

Autophagy Plays a Role in Chloroplast Degradation during Senescence in Individually Darkened Leaves

inferredcites →https://doi.org/10.1104/pp.111.176446openalex-snapshot

Broad-Spectrum Suppression of Innate Immunity Is Required for Colonization of Arabidopsis Roots by the Fungus Piriformospora indica

inferredcites →https://doi.org/10.1105/tpc.104.025395openalex-snapshot

Processing of ATG8s, Ubiquitin-Like Proteins, and Their Deconjugation by ATG4s Are Essential for Plant Autophagy

inferredcites →https://doi.org/10.1105/tpc.109.068635openalex-snapshot

Autophagy Negatively Regulates Cell Death by Controlling NPR1-Dependent Salicylic Acid Signaling during Senescence and the Innate Immune Response inArabidopsis

inferredcites →https://doi.org/10.1105/tpc.111.093260openalex-snapshot

The Mutualistic Fungus Piriformospora indica Colonizes Arabidopsis Roots by Inducing an Endoplasmic Reticulum Stress–Triggered Caspase-Dependent Cell Death

inferredcites →https://doi.org/10.1105/tpc.113.113399openalex-snapshot

The Deubiquitinating Enzyme AMSH1 and the ESCRT-III Subunit VPS2.1 Are Required for Autophagic Degradation inArabidopsis

inferredcites →https://doi.org/10.1105/tpc.113.117192openalex-snapshot

Catalase andNO CATALASE ACTIVITY1Promote Autophagy-Dependent Cell Death inArabidopsis

inferredcites →https://doi.org/10.1105/tpc.114.132043openalex-snapshot

Retromer Contributes to Immunity-Associated Cell Death in Arabidopsis

inferredcites →https://doi.org/10.1105/tpc.114.134692openalex-snapshot

Cytoplastic Glyceraldehyde-3-Phosphate Dehydrogenases Interact with ATG3 to Negatively Regulate Autophagy and Immunity in Nicotiana benthamiana

inferredcites →https://doi.org/10.1105/tpc.15.00158openalex-snapshot

Autophagic Recycling Plays a Central Role in Maize Nitrogen Remobilization

inferredcites →https://doi.org/10.1105/tpc.15.01012openalex-snapshot

An Autophagy-Related Kinase Is Essential for the Symbiotic Relationship between Phaseolus vulgaris and Both Rhizobia and Arbuscular Mycorrhizal Fungi

inferredcites →https://doi.org/10.1105/tpc.16.00681openalex-snapshot

Induced Genome-Wide Binding of Three Arabidopsis WRKY Transcription Factors during Early MAMP-Triggered Immunity

inferredcites →https://doi.org/10.1111/j.1365-313x.2009.03887.xopenalex-snapshot

Manipulation of plant innate immunity and gibberellin as factor of compatibility in the mutualistic association of barley roots with Piriformospora indica

inferredcites →https://doi.org/10.1111/j.1365-313x.2010.04166.xopenalex-snapshot

ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A AND ATG12B loci

inferredcites →https://doi.org/10.1111/j.1365-313x.2011.04546.xopenalex-snapshot

Autophagy differentially controls plant basal immunity to biotrophic and necrotrophic pathogens

inferredcites →https://doi.org/10.1111/j.1365-313x.2011.04553.xopenalex-snapshot

A critical role of autophagy in plant resistance to necrotrophic fungal pathogens

inferredcites →https://doi.org/10.1111/j.1365-313x.2011.04669.xopenalex-snapshot

ATG2, an autophagy‐related protein, negatively affects powdery mildew resistance and mildew‐induced cell death in Arabidopsis

inferredcites →https://doi.org/10.1111/j.1469-8137.2012.04275.xopenalex-snapshot

Indole derivative production by the root endophyte Piriformospora indica is not required for growth promotion but for biotrophic colonization of barley roots

inferredcites →https://doi.org/10.1111/nph.13411openalex-snapshot

Mutualistic root endophytism is not associated with the reduction of saprotrophic traits and requires a noncompromised plant innate immunity

inferredcites →https://doi.org/10.1111/nph.13977openalex-snapshot

Sebacinales – one thousand and one interactions with land plants

inferredcites →https://doi.org/10.1111/nph.15913openalex-snapshot

Proteomic and lipidomic analyses of the Arabidopsis atg5 autophagy mutant reveal major changes in endoplasmic reticulum and peroxisome metabolisms and in lipid composition

inferredcites →https://doi.org/10.1126/science.1163732openalex-snapshot

A Glucosinolate Metabolism Pathway in Living Plant Cells Mediates Broad-Spectrum Antifungal Defense

inferredcites →https://doi.org/10.1126/science.1164627openalex-snapshot

Glucosinolate Metabolites Required for an Arabidopsis Innate Immune Response

inferredcites →https://doi.org/10.1126/science.1242255openalex-snapshot

Staphylococcus aureus Degrades Neutrophil Extracellular Traps to Promote Immune Cell Death

inferredcites →https://doi.org/10.1126/science.343.6168.290openalex-snapshot

Identification of a Plant Receptor for Extracellular ATP

inferredcites →https://doi.org/10.1146/annurev-arplant-042811-105441openalex-snapshot

Autophagy: Pathways for Self-Eating in Plant Cells

inferredcites →https://doi.org/10.1146/annurev-arplant-042817-040606openalex-snapshot

Autophagy: The Master of Bulk and Selective Recycling

inferredcites →https://doi.org/10.1146/annurev-arplant-043014-114623openalex-snapshot

Fungal Effectors and Plant Susceptibility

inferredcites →https://doi.org/10.1146/annurev-cellbio-092910-154005openalex-snapshot

The Role of Atg Proteins in Autophagosome Formation

inferredcites →https://doi.org/10.1146/annurev-genet-102808-114910openalex-snapshot

Regulation Mechanisms and Signaling Pathways of Autophagy

inferredcites →https://doi.org/10.1371/journal.pone.0209658openalex-snapshot

Arabidopsis thaliana responds to colonisation of Piriformospora indica by secretion of symbiosis-specific proteins

inferredcites →https://doi.org/10.1371/journal.ppat.1002290openalex-snapshot

Endophytic Life Strategies Decoded by Genome and Transcriptome Analyses of the Mutualistic Root Symbiont Piriformospora indica

inferredcites →https://doi.org/10.15252/embr.201847430openalex-snapshot

Serendipita indica E5′NT modulates extracellular nucleotide levels in the plant apoplast and affects fungal colonization

inferredcites →https://doi.org/10.1534/genetics.107.086199openalex-snapshot

The ATG12-Conjugating Enzyme ATG10 Is Essential for Autophagic Vesicle Formation in Arabidopsis thaliana

inferredcites →https://doi.org/10.21769/bioprotoc.2519openalex-snapshot

Quantification of Membrane Damage/Cell Death Using Evan’s Blue Staining Technique

inferredcites →https://doi.org/10.4161/auto.29406openalex-snapshot

Autophagy deficiency leads to accumulation of ubiquitinated proteins, ER stress, and cell death inArabidopsis

inferredcites →https://doi.org/10.7554/elife.37476openalex-snapshot

Host autophagy machinery is diverted to the pathogen interface to mediate focal defense responses against the Irish potato famine pathogen

inferredcites →https://doi.org/10.7554/elife.58396openalex-snapshot

A cross-kingdom conserved ER-phagy receptor maintains endoplasmic reticulum homeostasis during stress

inferredcites →https://doi.org/10.7554/elife.65285openalex-snapshot

An oomycete effector subverts host vesicle trafficking to channel starvation-induced autophagy to the pathogen interface

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