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Bacillus subtilis derived lipopeptides disrupt quorum sensing and biofilm assembly in Staphylococcus aureus

https://doi.org/10.1101/2023.08.24.554662

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Parallel genetic adaptation across environments differing in mode of growth or resource availability

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

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Structural Biology of Nonribosomal Peptide Synthetases

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HT29 Cell Line

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Surfactin effectively inhibits Staphylococcus aureus adhesion and biofilm formation on surfaces

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Considerations regarding use of solvents in in vitro cell based assays

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The persistence of biofilm-associated antibiotic resistance of Staphylococcus aureus isolated from clinical bovine mastitis cases in Australia

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Subtilosin Prevents Biofilm Formation by Inhibiting Bacterial Quorum Sensing

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Antimicrobial Activity of Bacillus subtilis KATMIRA1933 and Bacillus amyloliquefaciens B-1895 Against Staphylococcus aureus Biofilms Isolated from Wound Infection

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Probiotics for the Reduction of Colonization with MRSA

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Efficacy and safety of biofilm dispersal by glycoside hydrolases in wounds

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Methods for in vitro evaluating antimicrobial activity: A review

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Ecology and genomics of Bacillus subtilis

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Dimethyl sulfoxide (DMSO) attenuates the inflammatory response in the in vitro intestinal Caco-2 cell model

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Probiotic for pathogen-specific Staphylococcus aureus decolonisation in Thailand: a phase 2, double-blind, randomised, placebo-controlled trial

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Structure–Function Analyses of a Staphylococcus epidermidis Autoinducing Peptide Reveals Motifs Critical for AgrC-type Receptor Modulation

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Fast and sensitive protein alignment using DIAMOND

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Biphasic intracellular expression of Staphylococcus aureus virulence factors and evidence for Agr‐mediated diffusion sensing

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Comparative genome-scale modelling of Staphylococcus aureus strains identifies strain-specific metabolic capabilities linked to pathogenicity

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Impact of the agr Quorum‐Sensing System on Adherence to Polystyrene in Staphylococcus aureus

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Virulence Gene Expression in Human Community‐AcquiredStaphylococcus aureusInfection

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The SaeR/S Gene Regulatory System Is Essential for Innate Immune Evasion byStaphylococcus aureus

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Mechanisms of Action of Probiotics

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Phigaro: high-throughput prophage sequence annotation

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clinker & clustermap.js: automatic generation of gene cluster comparison figures

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QUAST: quality assessment tool for genome assemblies

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Prokka: rapid prokaryotic genome annotation

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Evolved resistance to a novel cationic peptide antibiotic requires high mutation supply

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CommensalBacillus subtilisfrom cow milk inhibitsStaphylococcus aureusbiofilm formation and mastitis in mice

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Agricultural contamination impacts antibiotic resistance gene abundances in river bed sediment temporally

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Secondary metabolite production and the safety of industrially important members of the Bacillus subtilis group

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FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

inferredcites →https://doi.org/10.1093/nar/gkab301openalex-snapshot

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

inferredcites →https://doi.org/10.1093/nar/gkab335openalex-snapshot

antiSMASH 6.0: improving cluster detection and comparison capabilities

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Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR

inferredcites →https://doi.org/10.1093/nar/gkac920openalex-snapshot

CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database

inferredcites →https://doi.org/10.1098/rstb.2007.2049openalex-snapshot

Evolutionary theory of bacterial quorum sensing: when is a signal not a signal?

inferredcites →https://doi.org/10.1126/science.276.5321.2027openalex-snapshot

Bacterial Interference Caused by Autoinducing Peptide Variants

inferredcites →https://doi.org/10.1128/aac.01998-16openalex-snapshot

Glycoside Hydrolases Degrade Polymicrobial Bacterial Biofilms in Wounds

inferredcites →https://doi.org/10.1128/aac.46.5.1492-1502.2002openalex-snapshot

Accessory Gene Regulator ( agr ) Locus in Geographically Diverse Staphylococcus aureus Isolates with Reduced Susceptibility to Vancomycin

inferredcites →https://doi.org/10.1128/iai.01036-08openalex-snapshot

Interconnections between Sigma B, agr , and Proteolytic Activity in Staphylococcus aureus Biofilm Maturation

inferredcites →https://doi.org/10.1128/iai.70.2.631-641.2002openalex-snapshot

Relationships between Staphylococcus aureus Genetic Background, Virulence Factors, agr Groups (Alleles), and Human Disease

inferredcites →https://doi.org/10.1128/jb.00167-08openalex-snapshot

A NovelStaphylococcus aureusBiofilm Phenotype Mediated by the Fibronectin-Binding Proteins, FnBPA and FnBPB

inferredcites →https://doi.org/10.1128/jb.00290-20openalex-snapshot

The Large pBS32/pLS32 Plasmid of Ancestral Bacillus subtilis

inferredcites →https://doi.org/10.1128/jb.00696-13openalex-snapshot

Plasmid-Encoded ComI Inhibits Competence in the Ancestral 3610 Strain of Bacillus subtilis

inferredcites →https://doi.org/10.1128/jb.01882-14openalex-snapshot

Staphylococcus epidermidis agr Quorum-Sensing System: Signal Identification, Cross Talk, and Importance in Colonization

inferredcites →https://doi.org/10.1128/jb.05675-11openalex-snapshot

Whole-Genome Sequences of Bacillus subtilis and Close Relatives

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Isolation and characterization of four types of plasmids from Bacillus subtilis (natto).

inferredcites →https://doi.org/10.1128/jb.186.6.1838-1850.2004openalex-snapshot

Quorum Sensing in Staphylococcus aureus Biofilms

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Understanding and Addressing CLSI Breakpoint Revisions: a Primer for Clinical Laboratories

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Parallel Evolution of Tobramycin Resistance across Species and Environments

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Temporal and Stochastic Control of Staphylococcus aureus Biofilm Development

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Staphylococcal Biofilms

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A Decrease in Transcription Capacity Limits Growth Rate upon Translation Inhibition

inferredcites →https://doi.org/10.1128/msystems.00057-21openalex-snapshot

Phylogenetic Distribution of Secondary Metabolites in the Bacillus subtilis Species Complex

inferredcites →https://doi.org/10.1146/annurev.genet.42.110807.091640openalex-snapshot

Quorum Sensing in Staphylococci

inferredcites →https://doi.org/10.1172/jci200320442openalex-snapshot

Quorum sensing in Staphylococcus infections

inferredcites →https://doi.org/10.1186/s12934-020-01468-0openalex-snapshot

Construction and description of a constitutive plipastatin mono-producing Bacillus subtilis

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Bacillus subtilis revives conventional antibiotics against Staphylococcus aureus osteomyelitis

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The agr quorum sensing system in Staphylococcus aureus cells mediates death of sub-population

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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses

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Probiotic isolates from unconventional sources: a review

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Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

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A neural network model predicts community-level signaling states in a diverse microbial community

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Throughput screening of Bacillus subtilis strains that abundantly secrete surfactin in vitro identifies effective probiotic candidates

inferredcites →https://doi.org/10.1371/journal.ppat.1000052openalex-snapshot

agr-Mediated Dispersal of Staphylococcus aureus Biofilms

inferredcites →https://doi.org/10.1371/journal.ppat.1004870openalex-snapshot

Sigma Factor SigB Is Crucial to Mediate Staphylococcus aureus Adaptation during Chronic Infections

inferredcites →https://doi.org/10.1590/1414-431x20154734openalex-snapshot

Optimization of the RNeasy Mini Kit to obtain high-quality total RNA from sessile cells of Staphylococcus aureus

inferredcites →https://doi.org/10.18821/0208-0613-2016-34-1-18-25openalex-snapshot

Ability of Staphylococcus of various strains to create biofilms and their effect on human body cells

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Trends in Antibacterial Susceptibility of Mastitis Pathogens During a Seven-Year Period

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Molecular Networking: A Useful Tool for the Identification of New Psychoactive Substances in Seizures by LC–HRMS

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How Probiotics Affect the Microbiota

inferredcites →https://doi.org/10.3389/fimmu.2016.00563openalex-snapshot

Intestinal Innate Antiviral Immunity and Immunobiotics: Beneficial Effects against Rotavirus Infection

inferredcites →https://doi.org/10.3389/fmicb.2015.00685openalex-snapshot

Probiotic-based strategies for therapeutic and prophylactic use against multiple gastrointestinal diseases

inferredcites →https://doi.org/10.3389/fmicb.2016.01733openalex-snapshot

Cross-Talk between Staphylococcus aureus and Other Staphylococcal Species via the agr Quorum Sensing System

inferredcites →https://doi.org/10.3389/fmicb.2017.00925openalex-snapshot

The Profile and Antimicrobial Activity of Bacillus Lipopeptide Extracts of Five Potential Biocontrol Strains

inferredcites →https://doi.org/10.3389/fmicb.2018.00055openalex-snapshot

Therapeutic Targeting of the Staphylococcus aureus Accessory Gene Regulator (agr) System

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Overview of the Antimicrobial Compounds Produced by Members of the Bacillus subtilis Group

inferredcites →https://doi.org/10.3389/fmicb.2019.00712openalex-snapshot

Major Traditional Probiotics: Comparative Genomic Analyses and Roles in Gut Microbiome of Eight Cohorts

inferredcites →https://doi.org/10.3389/fmicb.2020.01167openalex-snapshot

Surfactin Like Broad Spectrum Antimicrobial Lipopeptide Co-produced With Sublancin From Bacillus subtilis Strain A52: Dual Reservoir of Bioactives

inferredcites →https://doi.org/10.3389/fmicb.2020.01779openalex-snapshot

Glabridin Averts Biofilms Formation in Methicillin-Resistant Staphylococcus aureus by Modulation of the Surfaceome

inferredcites →https://doi.org/10.3389/fmicb.2020.589640openalex-snapshot

Regulatory Mechanisms and Promising Applications of Quorum Sensing-Inhibiting Agents in Control of Bacterial Biofilm Formation

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Probiotic Bacilli Inhibit Salmonella Biofilm Formation Without Killing Planktonic Cells

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Antimicrobial, Antibiofilm, and Anti-persister Activities of Penfluridol Against Staphylococcus aureus

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Interference in Bacterial Quorum Sensing: A Biopharmaceutical Perspective

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Staphylococcal Biofilms: Challenges and Novel Therapeutic Perspectives

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Going beyond the Control of Quorum-Sensing to Combat Biofilm Infections

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PYED-1 Inhibits Biofilm Formation and Disrupts the Preformed Biofilm of Staphylococcus aureus

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Paraimmunobiotic Bifidobacteria Modulate the Expression Patterns of Peptidoglycan Recognition Proteins in Porcine Intestinal Epitheliocytes and Antigen Presenting Cells

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The SaeRS Two‐Component System of Staphylococcus aureus

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Phenotypic Variation during Biofilm Formation: Implications for Anti-Biofilm Therapeutic Design

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Anti-Quorum Sensing Activity of Probiotics: The Mechanism and Role in Food and Gut Health

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Establishment of a Novel Multiplex PCR Assay and Detection of Toxigenic Strains of the Species in the Bacillus cereus Group

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Evolutionary pathways to antibiotic resistance are dependent upon environmental structure and bacterial lifestyle

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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1101/2023.10.15.562438openalex-snapshot

Bacillus subtilis maintains antibiofilm activity against Staphylococcus aureus following adaptive laboratory evolution

inferred← citeshttps://doi.org/10.1128/aem.00010-25openalex-snapshot

Population and pan-genomic analyses of Staphylococcus pseudintermedius identify geographic distinctions in accessory gene content and novel loci associated with AMR

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