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Polygenic basis of Bt Cry resistance evolution in wild Helicoverpa zea

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Outgoing claims: the papers this work cites, builds on, or argues with.

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How do toxins from Bacillus thuringiensis kill insects? An evolutionary perspective
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Cry1Ab toxin production of MON 810 transgenic maize
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Gene amplification and insecticide resistance
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Pesticide durability and the evolution of resistance: A novel application of survival analysis
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Decreased Cry1Ac activation by midgut proteases associated with Cry1Ac resistance in Helicoverpa zea
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Perspectives on gene copy number variation and pesticide resistance
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Practical resistance to Cry toxins and efficacy of Vip3Aa in Bt cotton against Helicoverpa zea
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Data Analysis
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Invertebrate trypsins: a review
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Evaluation of gene flow in structured and seed blend refuge systems of non-Bt and Bt corn
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The genetic, molecular and phenotypic consequences of selection for insecticide resistance
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Editorial overview: Ecology: Ecological adaptation in agroecosystems: novel opportunities to integrate evolutionary biology and agricultural entomology
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Regulating resistance: CncC:Maf, antioxidant response elements and the overexpression of detoxification genes in insecticide resistance
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Resistance to Bt maize in Mythimna unipuncta (Lepidoptera: Noctuidae) is mediated by alteration in Cry1Ab protein activation
inferredcites →https://doi.org/10.1016/j.ibmb.2021.103678openalex-snapshot
Bt Cry1Ac resistance in Trichoplusia ni is conferred by multi-gene mutations
inferredcites →https://doi.org/10.1016/j.pestbp.2013.01.007openalex-snapshot
Combined effects of three crystalline toxins from Bacillus thuringiensis with seven proteinase inhibitors on beet armyworm, Spodoptera exigua Hübner (Lepidoptera: Noctuidae)
inferredcites →https://doi.org/10.1016/j.pestbp.2021.104822openalex-snapshot
Transcriptional regulation of xenobiotic detoxification genes in insects - An overview
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Environmental Fate and Effects ofBacillus thuringiensis(Bt) Proteins from Transgenic Crops: a Review
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Whole-genome resequencing reveals loci under selection during chicken domestication
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Surge in insect resistance to transgenic crops and prospects for sustainability
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Genome-wide efficient mixed-model analysis for association studies
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Fast gapped-read alignment with Bowtie 2
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Extensive standing genetic variation from a small number of founders enables rapid adaptation in Daphnia
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Structural variation in the sequencing era
inferredcites →https://doi.org/10.1038/s41587-019-0201-4openalex-snapshot
Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype
inferredcites →https://doi.org/10.1038/srep07219openalex-snapshot
Cis-mediated down-regulation of a trypsin gene associated with Bt resistance in cotton bollworm
inferredcites →https://doi.org/10.1073/pnas.0508312103openalex-snapshot
Farm-scale evaluation of the impacts of transgenic cotton on biodiversity, pesticide use, and yield
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Economic impacts and impact dynamics of Bt ( Bacillus thuringiensis ) cotton in India
inferredcites →https://doi.org/10.1073/pnas.1216719110openalex-snapshot
Potential shortfall of pyramided transgenic cotton for insect resistance management
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Gene amplification and microsatellite polymorphism underlie a recent insect host shift
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Regional pest suppression associated with widespread Bt maize adoption benefits vegetable growers
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Characterization of amplification core and esterase B1 gene responsible for insecticide resistance in Culex.
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Trimmomatic: a flexible trimmer for Illumina sequence data
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HTSeq—a Python framework to work with high-throughput sequencing data
inferredcites →https://doi.org/10.1093/ee/nvy142openalex-snapshot
Bt Resistance Implications for Helicoverpa zea (Lepidoptera: Noctuidae) Insecticide Resistance Management in the United States
inferredcites →https://doi.org/10.1093/genetics/iyac037openalex-snapshot
Novel genetic basis of resistance to Bt toxin Cry1Ac in Helicoverpa zea
inferredcites →https://doi.org/10.1093/jee/92.1.21openalex-snapshot
Variation in Susceptibility of Noctuid (Lepidoptera) Larvae Attacking Cotton and Soybean to Purified Endotoxin Proteins and Commercial Formulations of Bacillus thuringiensis
inferredcites →https://doi.org/10.1093/jee/96.3.914openalex-snapshot
Development, Survival and Fitness Performance of Helicoverpa zea (Lepidoptera: Noctuidae) in MON810 Bt Field Corn
inferredcites →https://doi.org/10.1093/jee/toy106openalex-snapshot
Long-Term Empirical and Observational Evidence of Practical Helicoverpa zea Resistance to Cotton With Pyramided Bt Toxins
inferredcites →https://doi.org/10.1093/jipm/pmx002openalex-snapshot
Factors Associated With Willingness to Plant Non-Bt Maize Refuge and Suggestions for Increasing Refuge Compliance
inferredcites →https://doi.org/10.1093/nar/gkaa1009openalex-snapshot
OrthoDB in 2020: evolutionary and functional annotations of orthologs
inferredcites →https://doi.org/10.1098/rspb.2012.1108openalex-snapshot
Gene duplication as a mechanism of genomic adaptation to a changing environment
inferredcites →https://doi.org/10.1098/rspb.2021.0577openalex-snapshot
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A genomic amplification affecting a carboxylesterase gene cluster confers organophosphate resistance in the mosquito Aedes aegypti : From genomic characterization to high‐throughput field detection
inferredcites →https://doi.org/10.1111/eva.13484openalex-snapshot
Utility and challenges of using whole‐genome resequencing to detect emerging insect and mite resistance in agroecosystems
inferredcites →https://doi.org/10.1111/imb.12234openalex-snapshot
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inferredcites →https://doi.org/10.1111/j.1558-5646.2010.01044.xopenalex-snapshot
INTEGRATING EVOLUTIONARY AND FUNCTIONAL APPROACHES TO INFER ADAPTATION AT SPECIFIC LOCI
inferredcites →https://doi.org/10.1111/mec.12084openalex-snapshot
Special features of RAD Sequencing data: implications for genotyping
inferredcites →https://doi.org/10.1111/mec.14430openalex-snapshot
Contemporary evolution of a Lepidopteran species, Heliothis virescens , in response to modern agricultural practices
inferredcites →https://doi.org/10.1111/mec.15253openalex-snapshot
Stacks 2: Analytical methods for paired‐end sequencing improve RADseq‐based population genomics
inferredcites →https://doi.org/10.1126/sciadv.1600850openalex-snapshot
Genetically engineered crops and pesticide use in U.S. maize and soybeans
inferredcites →https://doi.org/10.1126/sciadv.abg5285openalex-snapshot
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inferredcites →https://doi.org/10.1126/science.1190242openalex-snapshot
Areawide Suppression of European Corn Borer with Bt Maize Reaps Savings to Non-Bt Maize Growers
inferredcites →https://doi.org/10.1126/science.268.5219.1894openalex-snapshot
Managing the Evolution of Insect Resistance to Transgenic Plants
inferredcites →https://doi.org/10.1126/science.293.5536.1786openalex-snapshot
Humans as the World's Greatest Evolutionary Force
inferredcites →https://doi.org/10.1126/science.aam5512openalex-snapshot
Winter storms drive rapid phenotypic, regulatory, and genomic shifts in the green anole lizard
inferredcites →https://doi.org/10.1126/science.aar3780openalex-snapshot
Wicked evolution: Can we address the sociobiological dilemma of pesticide resistance?
inferredcites →https://doi.org/10.1126/science.abj7484openalex-snapshot
Direct observation of adaptive tracking on ecological time scales in Drosophila
inferredcites →https://doi.org/10.1146/annurev-ento-052620-073348openalex-snapshot
Mechanisms of Resistance to Insecticidal Proteins from Bacillus thuringiensis
inferredcites →https://doi.org/10.1146/annurev-ento-120220-105502openalex-snapshot
Management of Insect Pests with Bt Crops in the United States
inferredcites →https://doi.org/10.1146/annurev.ento.43.1.701openalex-snapshot
Sustainability of Transgenic Insecticidal Cultivars: Integrating Pest Genetics and Ecology
inferredcites →https://doi.org/10.1186/1471-2164-6-96openalex-snapshot
Bacillus thuringiensis Cry1Ca-resistant Spodoptera exigua lacks expression of one of four Aminopeptidase N genes
inferredcites →https://doi.org/10.1186/2047-217x-4-1openalex-snapshot
SmileFinder: a resampling-based approach to evaluate signatures of selection from genome-wide sets of matching allele frequency data in two or more diploid populations
inferredcites →https://doi.org/10.1186/s12915-017-0402-6openalex-snapshot
Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species
inferredcites →https://doi.org/10.1186/s12915-022-01226-1openalex-snapshot
A versatile contribution of both aminopeptidases N and ABC transporters to Bt Cry1Ac toxicity in the diamondback moth
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1186/s13059-019-1828-7openalex-snapshot
Structural variant calling: the long and the short of it
inferredcites →https://doi.org/10.1371/journal.pgen.1000998openalex-snapshot
Copy Number Variation and Transposable Elements Feature in Recent, Ongoing Adaptation at the Cyp6g1 Locus
inferredcites →https://doi.org/10.1371/journal.pgen.1000999openalex-snapshot
Amplification of a Cytochrome P450 Gene Is Associated with Resistance to Neonicotinoid Insecticides in the Aphid Myzus persicae
inferredcites →https://doi.org/10.1371/journal.pgen.1003264openalex-snapshot
Polygenic Modeling with Bayesian Sparse Linear Mixed Models
inferredcites →https://doi.org/10.1371/journal.pgen.1004775openalex-snapshot
Genomic Evidence of Rapid and Stable Adaptive Oscillations over Seasonal Time Scales in Drosophila
inferredcites →https://doi.org/10.1371/journal.pgen.1008119openalex-snapshot
Temporal genomic contrasts reveal rapid evolutionary responses in an alpine mammal during recent climate change
inferredcites →https://doi.org/10.1371/journal.pone.0169115openalex-snapshot
Field-Evolved Resistance in Corn Earworm to Cry Proteins Expressed by Transgenic Sweet Corn
inferredcites →https://doi.org/10.1371/journal.pone.0221343openalex-snapshot
Development, survival, and feeding behavior of Helicoverpa zea (Lepidoptera: Noctuidae) relative to Bt protein concentrations in corn ear tissues
inferredcites →https://doi.org/10.1371/journal.ppat.1009917openalex-snapshot
The regulation landscape of MAPK signaling cascade for thwarting Bacillus thuringiensis infection in an insect host
inferredcites →https://doi.org/10.1515/9781400840908openalex-snapshot
Ecological Models and Data in R
inferredcites →https://doi.org/10.1564/v26_oct_10openalex-snapshot
Refuge-in-the-Bag Strategy for Managing Insect Resistance to BT Maize
inferredcites →https://doi.org/10.21105/joss.01686openalex-snapshot
Welcome to the Tidyverse
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.3389/fmicb.2021.665101openalex-snapshot
Which Is Stronger? A Continuing Battle Between Cry Toxins and Insects
inferredcites →https://doi.org/10.3389/fpls.2019.00718openalex-snapshot
Allele Frequency Changes Provide Evidence for Selection and Identification of Candidate Loci for Survival in Red Clover (Trifolium pratense L.)
inferredcites →https://doi.org/10.3390/ijms21186528openalex-snapshot
Multiple Known Mechanisms and a Possible Role of an Enhanced Immune System in Bt-Resistance in a Field Population of the Bollworm, Helicoverpa zea: Differences in Gene Expression with RNAseq
inferredcites →https://doi.org/10.3390/toxins11020102openalex-snapshot
Occurrence and Ear Damage of Helicoverpa zea on Transgenic Bacillus thuringiensis Maize in the Field in Texas, U.S. and Its Susceptibility to Vip3A Protein
inferredcites →https://doi.org/10.3390/toxins12020076openalex-snapshot
Reduced Expression of a Novel Midgut Trypsin Gene Involved in Protoxin Activation Correlates with Cry1Ac Resistance in a Laboratory-Selected Strain of Plutella xylostella (L.)

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inferred← citeshttps://doi.org/10.1073/pnas.2416091121openalex-snapshot
Mismatch between lab-generated and field-evolved resistance to transgenic Bt crops in Helicoverpa zea
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