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Genome report: Genome sequence of the tuliptree scale insect, Toumeyella liriodendri (Gmelin)

https://doi.org/10.1101/2024.07.09.602735

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Karyotype Evolution in Holocentric Organisms

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Cytology of hermaphroditism in Icerya purchasi (Coccidae)

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Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited Zoom

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Dichotomy of Dosage Compensation along the Neo Z Chromosome of the Monarch Butterfly

inferredcites →https://doi.org/10.1038/nbt.1883openalex-snapshot

Full-length transcriptome assembly from RNA-Seq data without a reference genome

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Comparative genomics reveals the dynamics of chromosome evolution in Lepidoptera

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Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm

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Helixer: ab initio prediction of primary eukaryotic gene models combining deep learning and a hidden Markov model

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Putting scales into evolutionary time: the divergence of major scale insect lineages (Hemiptera) predates the radiation of modern angiosperm hosts

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Phylogenomics and the evolution of hemipteroid insects

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RepeatModeler2 for automated genomic discovery of transposable element families

inferredcites →https://doi.org/10.1080/00087114.1986.10797795openalex-snapshot

Somatic Chromosome Complements of Nine Armored Scale Insects (Homoptera: Coccoidea: Diaspididae) of India and Their Karyological Relationship

inferredcites →https://doi.org/10.1093/aesa/63.1.228openalex-snapshot

Biology of the Tuliptree Scale, Toumeyella liriodendri (Homoptera: Coccidae)

inferredcites →https://doi.org/10.1093/bioinformatics/btac808openalex-snapshot

YaHS: yet another Hi-C scaffolding tool

inferredcites →https://doi.org/10.1093/bioinformatics/btq102openalex-snapshot

Genome-wide synteny through highly sensitive sequence alignment: Satsuma

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ScaleNet: a literature-based model of scale insect biology and systematics

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The B Chromosome of Pseudococcus viburni: A Selfish Chromosome that Exploits Whole-Genome Meiotic Drive

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Genome sequence of the Chinese white wax scale insect Ericerus pela: the first draft genome for the Coccidae family of scale insects

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Sex Determination, Sex Chromosomes, and Karyotype Evolution in Insects

inferredcites →https://doi.org/10.1093/molbev/msab052openalex-snapshot

Males That Silence Their Father’s Genes: Genomic Imprinting of a Complete Haploid Genome

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FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

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Efficient Architecture-Aware Acceleration of BWA-MEM for Multicore Systems

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A chromosome‐level genome assembly provides new insights into paternal genome elimination in the cotton mealybug Phenacoccus solenopsis

inferredcites →https://doi.org/10.1111/1755-0998.13376openalex-snapshot

Genome assembly and methylome analysis of the white wax scale insect provides insight into sexual differentiation of metamorphosis in hexapods

inferredcites →https://doi.org/10.1111/evo.14233openalex-snapshot

Sex, males, and hermaphrodites in the scale insect Icerya purchasi *

inferredcites →https://doi.org/10.1111/evo.14341openalex-snapshot

Support for faster and more adaptive Z chromosome evolution in two divergent lepidopteran lineages *

inferredcites →https://doi.org/10.1146/annurev-ecolsys-021822-010659openalex-snapshot

Asymmetric Inheritance: The Diversity and Evolution of Non-Mendelian Reproductive Strategies

inferredcites →https://doi.org/10.1146/annurev.en.34.010189.000245openalex-snapshot

The History Of The Vedalia Beetle Importation To California And Its Impact On The Development Of Biological Control

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LocText: relation extraction of protein localizations to assist database curation

inferredcites →https://doi.org/10.1186/s13100-015-0041-9openalex-snapshot

Repbase Update, a database of repetitive elements in eukaryotic genomes

inferredcites →https://doi.org/10.12688/f1000research.12232.1openalex-snapshot

BlobTools: Interrogation of genome assemblies

inferredcites →https://doi.org/10.12688/wellcomeopenres.20653.1openalex-snapshot

The genome sequence of the cottony cushion scale, Icerya purchasi (Maskell, 1879)

inferredcites →https://doi.org/10.12688/wellcomeopenres.20686.1openalex-snapshot

The genome sequence of the citrus mealybug, Planococcus citri (Risso, 1913)

inferredcites →https://doi.org/10.1371/journal.pgen.1009076openalex-snapshot

Chromosome number evolves at equal rates in holocentric and monocentric clades

inferredcites →https://doi.org/10.1534/g3.117.300187openalex-snapshot

Neo-sex Chromosomes in the Monarch Butterfly, Danaus plexippus

inferredcites →https://doi.org/10.5281/zenodo.5161101openalex-snapshot

Los cocoideos (Hemiptera: Sternorrhyncha: Coccoidea) presentes en la Cordillera de Guaniguanico, Pinar del Río, Cuba, y la relación con sus hospedantes

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