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GPSA2: combining landmark-free and landmark-based methods in geometric morphometrics

https://doi.org/10.1101/2024.08.03.604701
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Thirty years of geometric morphometrics: Achievements, challenges, and the ongoing quest for biological meaningfulness
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A New Fully Automated Approach for Aligning and Comparing Shapes
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Development and Assessment of Fully Automated and Globally Transitive Geometric Morphometric Methods, With Application to a Biological Comparative Dataset With High Interspecific Variation
inferredcites →https://doi.org/10.1002/ece3.10613openalex-snapshot
A landmark‐free analysis of the pelvic girdle in Sulawesi ricefishes (Adrianichthyidae): How 2D and 3D geometric morphometrics can complement each other in the analysis of a complex structure
inferredcites →https://doi.org/10.1002/ece3.3256openalex-snapshot
Sharing is caring? Measurement error and the issues arising from combining 3D morphometric datasets
inferredcites →https://doi.org/10.1007/0-387-27614-9openalex-snapshot
Modern Morphometrics in Physical Anthropology
inferredcites →https://doi.org/10.1007/978-0-387-92125-9openalex-snapshot
A Guide to QTL Mapping with R/qtl
inferredcites →https://doi.org/10.1007/978-1-4757-9083-2openalex-snapshot
Advances in Morphometrics
inferredcites →https://doi.org/10.1007/978-1-4757-9083-2_15openalex-snapshot
Three-Dimensional Generalized Resistant Fitting and the Comparison of Least-Squares and Resistant-Fit Residuals
inferredcites →https://doi.org/10.1007/978-3-662-05105-4_2openalex-snapshot
Discrete Differential-Geometry Operators for Triangulated 2-Manifolds
inferredcites →https://doi.org/10.1007/bf02291478openalex-snapshot
Generalized Procrustes Analysis
inferredcites →https://doi.org/10.1007/s00435-020-00499-wopenalex-snapshot
Less tautology, more biology? A comment on “high-density” morphometrics
inferredcites →https://doi.org/10.1007/s10914-016-9326-0openalex-snapshot
Introducing molaR: a New R Package for Quantitative Topographic Analysis of Teeth (and Other Topographic Surfaces)
inferredcites →https://doi.org/10.1007/s11692-009-9055-xopenalex-snapshot
Advances in Geometric Morphometrics
inferredcites →https://doi.org/10.1007/s11692-020-09513-xopenalex-snapshot
Walking on Kendall’s Shape Space: Understanding Shape Spaces and Their Coordinate Systems
inferredcites →https://doi.org/10.1007/s11692-020-09520-yopenalex-snapshot
How Exactly Did the Nose Get That Long? A Critical Rethinking of the Pinocchio Effect and How Shape Changes Relate to Landmarks
inferredcites →https://doi.org/10.1007/s11692-024-09627-6openalex-snapshot
Interrogating Random and Systematic Measurement Error in Morphometric Data
inferredcites →https://doi.org/10.1016/0169-5347(93)90024-jopenalex-snapshot
A revolution morphometrics
inferredcites →https://doi.org/10.1016/0262-8856(92)90066-copenalex-snapshot
Object modelling by registration of multiple range images
inferredcites →https://doi.org/10.1016/0262-8856(92)90076-fopenalex-snapshot
Surface shape and curvature scales
inferredcites →https://doi.org/10.1016/j.cagd.2008.01.002openalex-snapshot
Integral invariants for robust geometry processing
inferredcites →https://doi.org/10.1016/j.cviu.2010.11.021openalex-snapshot
Local shape descriptor selection for object recognition in range data
inferredcites →https://doi.org/10.1016/j.imavis.2004.05.007openalex-snapshot
Robust Euclidean alignment of 3D point sets: the trimmed iterative closest point algorithm
inferredcites →https://doi.org/10.1016/j.neuroimage.2014.06.043openalex-snapshot
Morphometry of anatomical shape complexes with dense deformations and sparse parameters
inferredcites →https://doi.org/10.1017/cbo9780511573064openalex-snapshot
Morphometric Tools for Landmark Data
inferredcites →https://doi.org/10.1073/pnas.1112822108openalex-snapshot
Algorithms to automatically quantify the geometric similarity of anatomical surfaces
inferredcites →https://doi.org/10.1080/106351500750049770openalex-snapshot
Ability of Geometric Morphometric Methods to Estimate a Known Covariance Matrix
inferredcites →https://doi.org/10.1080/10867651.1999.10487501openalex-snapshot
Weights for Computing Vertex Normals from Facet Normals
inferredcites →https://doi.org/10.1080/11250000409356545openalex-snapshot
Geometric morphometrics: Ten years of progress following the ‘revolution’
inferredcites →https://doi.org/10.1109/34.121791openalex-snapshot
A method for registration of 3-D shapes
inferredcites →https://doi.org/10.1109/tdpvt.2004.1335277openalex-snapshot
Estimating curvatures and their derivatives on triangle meshes
inferredcites →https://doi.org/10.1111/j.1467-8659.2009.01515.xopenalex-snapshot
A Concise and Provably Informative Multi‐Scale Signature Based on Heat Diffusion
inferredcites →https://doi.org/10.1111/j.1469-7998.1967.tb02866.xopenalex-snapshot
Trend‐surface analysis of transformation grids
inferredcites →https://doi.org/10.1112/blms/16.2.81openalex-snapshot
Shape Manifolds, Procrustean Metrics, and Complex Projective Spaces
inferredcites →https://doi.org/10.1145/355744.355745openalex-snapshot
An Algorithm for Finding Best Matches in Logarithmic Expected Time
inferredcites →https://doi.org/10.1186/s12862-025-02377-9openalex-snapshot
Assessing the application of landmark-free morphometrics to macroevolutionary analyses
inferredcites →https://doi.org/10.1371/journal.pcbi.1009061openalex-snapshot
Automated morphological phenotyping using learned shape descriptors and functional maps: A novel approach to geometric morphometrics
inferredcites →https://doi.org/10.1371/journal.pone.0150368openalex-snapshot
A Landmark-Free Method for Three-Dimensional Shape Analysis
inferredcites →https://doi.org/10.1534/g3.116.027888openalex-snapshot
The Genetic Basis of Baculum Size and Shape Variation in Mice
inferredcites →https://doi.org/10.2307/2992207openalex-snapshot
Extensions of the Procrustes Method for the Optimal Superimposition of Landmarks
inferredcites →https://doi.org/10.2312/3dor/3dor11/049-056openalex-snapshot
Local Shape Descriptors, a Survey and Evaluation
inferredcites →https://doi.org/10.2312/egst.20001029openalex-snapshot
Geometric Signal Processing on Polygonal Meshes
inferredcites →https://doi.org/10.2312/localchapterevents/italchap/italianchapconf2008/129-136openalex-snapshot
MeshLab: an Open-Source Mesh Processing Tool
inferredcites →https://doi.org/10.3390/ani13071179openalex-snapshot
A Comparison of Semilandmarking Approaches in the Analysis of Size and Shape
inferredcites →https://doi.org/10.4404/hystrix-24.1-6283openalex-snapshot
A field comes of age: geometric morphometrics in the 21 st century
inferredcites →https://doi.org/10.7717/peerj.4861openalex-snapshot
Scan, extract, wrap, compute—a 3D method to analyse morphological shape differences

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1093/iob/obag043openalex-snapshot
Testing for Functional Adaptation in a Genital Bone: Baculum Size, Shape, and Microstructure Show Little Plastic Response to Mating Across Five Rodent Species
inferred← citeshttps://doi.org/10.1186/s12862-025-02377-9openalex-snapshot
Assessing the application of landmark-free morphometrics to macroevolutionary analyses
inferred← citeshttps://doi.org/10.21203/rs.3.rs-10883177/v1openalex-snapshot
Comparison of iPhone and DSLR photogrammetry methods with implications for geometric morphometric analysis
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