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Enhanced Computational and Experimental Approaches for Comparative Analysis of the Human Mycobiome
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Outgoing claims: the papers this work cites, builds on, or argues with.
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Methods for DNA extraction from Candida albicans
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Pan-cancer analyses reveal cancer-type-specific fungal ecologies and bacteriome interactions
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FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
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Extensive intragenomic variation in the internal transcribed spacer region of fungi
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Oral-gut microbiome interactions in advanced cirrhosis: characterisation of pathogenic enterotypes and salivatypes, virulence factors and antimicrobial resistance
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Polymicrobial interactions involving fungi and their importance for the environment and in human disease
inferredcites →https://doi.org/10.1016/j.mjafi.2017.07.009openalex-snapshot
Evaluation of three DNA extraction methods from fungal cultures
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The gut mycobiome in health, disease, and clinical applications in association with the gut bacterial microbiome assembly
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A human gut microbial gene catalogue established by metagenomic sequencing
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A framework for human microbiome research
inferredcites →https://doi.org/10.1038/nbt.3960openalex-snapshot
Towards standards for human fecal sample processing in metagenomic studies
inferredcites →https://doi.org/10.1038/nrgastro.2012.156openalex-snapshot
The role of the gut microbiota in nutrition and health
inferredcites →https://doi.org/10.1038/s41579-018-0116-yopenalex-snapshot
Mycobiome diversity: high-throughput sequencing and identification of fungi
inferredcites →https://doi.org/10.1038/s41598-020-74137-2openalex-snapshot
Optimized DNA Extraction and Purification Method for Characterization of Bacterial and Fungal Communities in Lung Tissue Samples
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Obesity changes the human gut mycobiome
inferredcites →https://doi.org/10.1080/19490976.2022.2089002openalex-snapshot
Interactions among the mycobiome, bacteriome, inflammation, and diet in people living with HIV
inferredcites →https://doi.org/10.1080/19490976.2022.2121576openalex-snapshot
Host-mycobiome metabolic interactions in health and disease
inferredcites →https://doi.org/10.1080/21505594.2016.1247140openalex-snapshot
Fungi in the healthy human gastrointestinal tract
inferredcites →https://doi.org/10.1093/bioinformatics/btab216openalex-snapshot
A critical assessment of gene catalogs for metagenomic analysis
inferredcites →https://doi.org/10.1093/femsre/fuw047openalex-snapshot
Forgotten fungi—the gut mycobiome in human health and disease
inferredcites →https://doi.org/10.1093/nar/gky1022openalex-snapshot
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
inferredcites →https://doi.org/10.1098/rsos.231129openalex-snapshot
Assessment of DNA extraction methods for human gut mycobiome analysis
inferredcites →https://doi.org/10.1111/j.1567-1364.2008.00359.xopenalex-snapshot
Analysis of Malassezia microbiota in healthy superficial human skin and in psoriatic lesions by multiplex real-time PCR
inferredcites →https://doi.org/10.1111/odi.12899openalex-snapshot
Biodiversity of the human oral mycobiome in health and disease
inferredcites →https://doi.org/10.1128/cmr.15.1.21-57.2002openalex-snapshot
Immunology of Diseases Associated withMalasseziaSpecies
inferredcites →https://doi.org/10.1128/jcm.01355-17openalex-snapshot
Thinking beyond the Common Candida Species: Need for Species-Level Identification of Candida Due to the Emergence of Multidrug-Resistant Candida auris
inferredcites →https://doi.org/10.1128/jcm.42.9.4293-4296.2004openalex-snapshot
Simple Chemical Extraction Method for DNA Isolation from Aspergillus fumigatus and Other Aspergillus Species
inferredcites →https://doi.org/10.1128/jcm.43.10.5122-5128.2005openalex-snapshot
Comparison of Six DNA Extraction Methods for Recovery of Fungal DNA as Assessed by Quantitative PCR
inferredcites →https://doi.org/10.1128/mbio.01250-16openalex-snapshot
Bacteriome and Mycobiome Interactions Underscore Microbial Dysbiosis in Familial Crohn’s Disease
inferredcites →https://doi.org/10.1146/annurev-micro-091014-104330openalex-snapshot
Candida albicans Biofilms and Human Disease
inferredcites →https://doi.org/10.1155/2020/9560684openalex-snapshot
Mycobiome in the Gut: A Multiperspective Review
inferredcites →https://doi.org/10.1186/gm467openalex-snapshot
The human mycobiome in health and disease
inferredcites →https://doi.org/10.1186/s12864-019-5883-yopenalex-snapshot
HumanMycobiomeScan: a new bioinformatics tool for the characterization of the fungal fraction in metagenomic samples
inferredcites →https://doi.org/10.1186/s40168-017-0373-4openalex-snapshot
The gut mycobiome of the Human Microbiome Project healthy cohort
inferredcites →https://doi.org/10.1186/s40168-021-01078-xopenalex-snapshot
An integrated gene catalog and over 10,000 metagenome-assembled genomes from the gastrointestinal microbiome of ruminants
inferredcites →https://doi.org/10.1186/s43008-020-00033-zopenalex-snapshot
Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
inferredcites →https://doi.org/10.1186/s43008-021-00067-xopenalex-snapshot
Nomenclatural issues concerning cultured yeasts and other fungi: why it is important to avoid unneeded name changes
inferredcites →https://doi.org/10.1371/journal.pone.0090899openalex-snapshot
Redefining the Human Oral Mycobiome with Improved Practices in Amplicon-based Taxonomy: Discovery of Malassezia as a Prominent Commensal
inferredcites →https://doi.org/10.1371/journal.pone.0192898openalex-snapshot
Identification of fungi in shotgun metagenomics datasets
inferredcites →https://doi.org/10.1371/journal.ppat.1007138openalex-snapshot
Population genomics shows no distinction between pathogenic Candida krusei and environmental Pichia kudriavzevii: One species, four names
inferredcites →https://doi.org/10.1371/journal.ppat.1007638openalex-snapshot
Candida auris: An emerging pathogen “incognito”?
inferredcites →https://doi.org/10.1371/journal.ppat.1009503openalex-snapshot
Climate change and the emergence of fungal pathogens
inferredcites →https://doi.org/10.15454/wq4utvopenalex-snapshot
A catalog of genes and species of the human oral microbiota
inferredcites →https://doi.org/10.21203/rs.3.rs-3088449/v1openalex-snapshot
Faecal microbiota transplant restores intestinal barrier function and augments ammonia metabolism in patients with cirrhosis: a randomised single-blind placebo-controlled trial
inferredcites →https://doi.org/10.3389/fmicb.2017.01432openalex-snapshot
The Fungal Frontier: A Comparative Analysis of Methods Used in the Study of the Human Gut Mycobiome
inferredcites →https://doi.org/10.3389/fmicb.2018.03249openalex-snapshot
A Fungal World: Could the Gut Mycobiome Be Involved in Neurological Disease?
inferredcites →https://doi.org/10.3389/fmicb.2021.708550openalex-snapshot
Long-Reads-Based Metagenomics in Clinical Diagnosis With a Special Focus on Fungal Infections
inferredcites →https://doi.org/10.3390/biom9100521openalex-snapshot
Antifungal Agents in Agriculture: Friends and Foes of Public Health
inferredcites →https://doi.org/10.3390/jof3040056openalex-snapshot
The Human Mucosal Mycobiome and Fungal Community Interactions
inferredcites →https://doi.org/10.3390/jof3040057openalex-snapshot
Global and Multi-National Prevalence of Fungal Diseases—Estimate Precision
inferredcites →https://doi.org/10.3390/microorganisms10020459openalex-snapshot
Mycobiome-Host Coevolution? The Mycobiome of Ancestral Human Populations Seems to Be Different and Less Diverse Than Those of Extant Native and Urban-Industrialized Populations
inferredcites →https://doi.org/10.3390/microorganisms6010022openalex-snapshot
The Mycobiome: A Neglected Component in the Microbiota-Gut-Brain Axis
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