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Evolutionary Origin of the Mammalian Hematopoietic System Found in a Colonial Chordate

https://doi.org/10.1101/206318

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Echinoderm Immunity

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Immunocompetent Molecules and Their Response Network in Horseshoe Crabs

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A morphological and immunohistochemical study of programmed cell death in Botryllus schlosseri (Tunicata, Ascidiacea)

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Genomic analysis of immunity in a Urochordate and the emergence of the vertebrate immune system: “waiting for Godot”

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In search of the ‘missing self’: MHC molecules and NK cell recognition

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The Evolution of Adaptive Immunity in Vertebrates

inferredcites →https://doi.org/10.1016/j.cell.2005.10.026openalex-snapshot

Stem Cells Are Units of Natural Selection in a Colonial Ascidian

inferredcites →https://doi.org/10.1016/j.dci.2015.12.008openalex-snapshot

Amphibian macrophage development and antiviral defenses

inferredcites →https://doi.org/10.1016/j.dci.2015.12.009openalex-snapshot

Crustacean hematopoiesis

inferredcites →https://doi.org/10.1016/j.devcel.2012.11.010openalex-snapshot

Repeated, Long-Term Cycling of Putative Stem Cells between Niches in a Basal Chordate

inferredcites →https://doi.org/10.1016/j.devcel.2015.03.014openalex-snapshot

Active Hematopoietic Hubs in Drosophila Adults Generate Hemocytes and Contribute to Immune Response

inferredcites →https://doi.org/10.1016/j.imbio.2012.06.004openalex-snapshot

Marine invertebrates cross phyla comparisons reveal highly conserved immune machinery

inferredcites →https://doi.org/10.1016/j.jcz.2015.04.004openalex-snapshot

Life history and ecological genetics of the colonial ascidian Botryllus schlosseri

inferredcites →https://doi.org/10.1016/j.smim.2009.12.002openalex-snapshot

Evolution of adaptive immune recognition in jawless vertebrates

inferredcites →https://doi.org/10.1016/j.stem.2008.07.023openalex-snapshot

Identification of the Endostyle as a Stem Cell Niche in a Colonial Chordate

inferredcites →https://doi.org/10.1016/j.stemcr.2017.05.018openalex-snapshot

Using Zebrafish to Study Pathways that Regulate Hematopoietic Stem Cell Self-Renewal and Migration

inferredcites →https://doi.org/10.1016/j.ydbio.2012.11.015openalex-snapshot

The evolutionary origins of chordate hematopoiesis and vertebrate endothelia

inferredcites →https://doi.org/10.1016/s0092-8674(00)81692-xopenalex-snapshot

Stem Cells

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Delineation of the Thymic and Bursal Lymphoid Systems in the Chicken

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Criminal Behaviour and the XYY Male

inferredcites →https://doi.org/10.1038/213815b0openalex-snapshot

Microgeographical and Ecological Distribution of Colour Morphs of Botryllus schlosseri (Ascidiacea)

inferredcites →https://doi.org/10.1038/295499a0openalex-snapshot

Protochordate allorecognition is controlled by a MHC-like gene system

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Tunicates and not cephalochordates are the closest living relatives of vertebrates

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Dual nature of the adaptive immune system in lampreys

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A thymus candidate in lampreys

inferredcites →https://doi.org/10.1038/nature12984openalex-snapshot

The bone marrow niche for haematopoietic stem cells

inferredcites →https://doi.org/10.1038/nature16943openalex-snapshot

Hoxb5 marks long-term haematopoietic stem cells and reveals a homogenous perivascular niche

inferredcites →https://doi.org/10.1038/ncomms10617openalex-snapshot

Gut immunity in a protochordate involves a secreted immunoglobulin-type mediator binding host chitin and bacteria

inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot

Fast gapped-read alignment with Bowtie 2

inferredcites →https://doi.org/10.1038/nrg2703openalex-snapshot

Origin and evolution of the adaptive immune system: genetic events and selective pressures

inferredcites →https://doi.org/10.1038/nri.2017.53openalex-snapshot

Adult haematopoietic stem cell niches

inferredcites →https://doi.org/10.1038/nrm3184openalex-snapshot

Dynamic niches in the origination and differentiation of haematopoietic stem cells

inferredcites →https://doi.org/10.1038/sdata.2016.109openalex-snapshot

An atlas of transcriptional, chromatin accessibility, and surface marker changes in human mesoderm development

inferredcites →https://doi.org/10.1073/pnas.1606276113openalex-snapshot

Developmental cell death programs license cytotoxic cells to eliminate histocompatible partners

inferredcites →https://doi.org/10.1073/pnas.93.26.15254openalex-snapshot

Somatic and germ cell parasitism in a colonial ascidian: Possible role for a highly polymorphic allorecognition system

inferredcites →https://doi.org/10.1073/pnas.96.16.9148openalex-snapshot

Heritable germ and somatic cell lineage competitions in chimeric colonial protochordates

inferredcites →https://doi.org/10.1084/jem.153.3.569openalex-snapshot

Characteristics of human large granular lymphocytes and relationship to natural killer and K cells

inferredcites →https://doi.org/10.1089/omi.2015.0168openalex-snapshot

GeneAnalytics: An Integrative Gene Set Analysis Tool for Next Generation Sequencing, RNAseq and Microarray Data

inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot

Fast and accurate short read alignment with Burrows–Wheeler transform

inferredcites →https://doi.org/10.1093/bioinformatics/btp616openalex-snapshot

edgeR : a Bioconductor package for differential expression analysis of digital gene expression data

inferredcites →https://doi.org/10.1093/bioinformatics/btp698openalex-snapshot

Fast and accurate long-read alignment with Burrows–Wheeler transform

inferredcites →https://doi.org/10.1093/bioinformatics/btr507openalex-snapshot

FLASH: fast length adjustment of short reads to improve genome assemblies

inferredcites →https://doi.org/10.1093/bioinformatics/bts480openalex-snapshot

Snakemake—a scalable bioinformatics workflow engine

inferredcites →https://doi.org/10.1093/bioinformatics/btu170openalex-snapshot

Trimmomatic: a flexible trimmer for Illumina sequence data

inferredcites →https://doi.org/10.1126/science.1080049openalex-snapshot

The Draft Genome of Ciona intestinalis : Insights into Chordate and Vertebrate Origins

inferredcites →https://doi.org/10.1126/science.1198704openalex-snapshot

Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum

inferredcites →https://doi.org/10.1126/science.1238036openalex-snapshot

Identification of a Colonial Chordate Histocompatibility Gene

inferredcites →https://doi.org/10.1126/science.166.3906.747openalex-snapshot

Cell Sorting: Automated Separation of Mammalian Cells as a Function of Intracellular Fluorescence

inferredcites →https://doi.org/10.1126/science.2898810openalex-snapshot

Purification and Characterization of Mouse Hematopoietic Stem Cells

inferredcites →https://doi.org/10.1126/sciimmunol.aag1672openalex-snapshot

Class I HLA haplotypes form two schools that educate NK cells in different ways

inferredcites →https://doi.org/10.1371/journal.pone.0018531openalex-snapshot

The Immune Cellular Effectors of Terrestrial Isopod Armadillidium vulgare: Meeting with Their Invaders, Wolbachia

inferredcites →https://doi.org/10.1371/journal.pone.0035772openalex-snapshot

Glycans in Sera of Amyotrophic Lateral Sclerosis Patients and Their Role in Killing Neuronal Cells

inferredcites →https://doi.org/10.1371/journal.pone.0040321openalex-snapshot

Gene Expression Commons: An Open Platform for Absolute Gene Expression Profiling

inferredcites →https://doi.org/10.2307/1541383openalex-snapshot

GROWTH AND SEXUAL MATURATION OF LABORATORY-CULTURED MONTEREYBOTRYLLUS SCHLOSSERI

inferredcites →https://doi.org/10.3389/fimmu.2017.00674openalex-snapshot

Immunity in Protochordates: The Tunicate Perspective

inferredcites →https://doi.org/10.4081/952openalex-snapshot

Cytochemical properties of Botryllus schlosseri haemocytes: indications for morpho-functional characterisation.

inferredcites →https://doi.org/10.7554/elife.00569openalex-snapshot

The genome sequence of the colonial chordate, Botryllus schlosseri

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.ydbio.2018.09.009openalex-snapshot

Sixty years of experimental studies on the blastogenesis of the colonial tunicate Botryllus schlosseri

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