On the public citation graph

Significant abundance of cis configurations of mutations in diploid human genomes

https://doi.org/10.1101/221085
0 signed · 45 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/humu.21490openalex-snapshot
Prediction of missense mutation functionality depends on both the algorithm and sequence alignment employed
inferredcites →https://doi.org/10.1002/jcc.20084openalex-snapshot
UCSF Chimera—A visualization system for exploratory research and analysis
inferredcites →https://doi.org/10.1007/s00439-013-1325-0openalex-snapshot
MuPIT interactive: webserver for mapping variant positions to annotated, interactive 3D structures
inferredcites →https://doi.org/10.1016/j.jmb.2006.09.053openalex-snapshot
Characterization of Compensated Mutations in Terms of Structural and Physico-Chemical Properties
inferredcites →https://doi.org/10.1016/j.jmb.2009.11.002openalex-snapshot
Compensated Pathogenic Deviations: Analysis of Structural Effects
inferredcites →https://doi.org/10.1016/s0065-2660(02)46001-4openalex-snapshot
Preface
inferredcites →https://doi.org/10.1038/nature01400openalex-snapshot
The mosaic that is our genome
inferredcites →https://doi.org/10.1038/nature04240openalex-snapshot
Natural selection on protein-coding genes in the human genome
inferredcites →https://doi.org/10.1038/nature07485openalex-snapshot
DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome
inferredcites →https://doi.org/10.1038/nature11236openalex-snapshot
Accurate whole-genome sequencing and haplotyping from 10 to 20 human cells
inferredcites →https://doi.org/10.1038/nature11632openalex-snapshot
An integrated map of genetic variation from 1,092 human genomes
inferredcites →https://doi.org/10.1038/nature11690openalex-snapshot
Analysis of 6,515 exomes reveals the recent origin of most human protein-coding variants
inferredcites →https://doi.org/10.1038/nature14217openalex-snapshot
Integrative analysis of haplotype-resolved epigenomes across human tissues
inferredcites →https://doi.org/10.1038/nature14222openalex-snapshot
Chromatin architecture reorganization during stem cell differentiation
inferredcites →https://doi.org/10.1038/nature15393openalex-snapshot
A global reference for human genetic variation
inferredcites →https://doi.org/10.1038/nature19057openalex-snapshot
Analysis of protein-coding genetic variation in 60,706 humans
inferredcites →https://doi.org/10.1038/nature21347openalex-snapshot
Tracing the peopling of the world through genomics
inferredcites →https://doi.org/10.1038/ncomms6569openalex-snapshot
Multiple haplotype-resolved genomes reveal population patterns of gene and protein diplotypes
inferredcites →https://doi.org/10.1038/ng.3493openalex-snapshot
Genes with monoallelic expression contribute disproportionately to genetic diversity in humans
inferredcites →https://doi.org/10.1038/ng.680openalex-snapshot
Resequencing of 200 human exomes identifies an excess of low-frequency non-synonymous coding variants
inferredcites →https://doi.org/10.1038/nmeth0410-248openalex-snapshot
A method and server for predicting damaging missense mutations
inferredcites →https://doi.org/10.1038/nprot.2016.117openalex-snapshot
Analyzing and interpreting genome data at the network level with ConsensusPathDB
inferredcites →https://doi.org/10.1038/nrg1672openalex-snapshot
Missense meanderings in sequence space: a biophysical view of protein evolution
inferredcites →https://doi.org/10.1038/nrg2361openalex-snapshot
Linkage disequilibrium — understanding the evolutionary past and mapping the medical future
inferredcites →https://doi.org/10.1038/nrg2950openalex-snapshot
The importance of phase information for human genomics
inferredcites →https://doi.org/10.1038/nrg3239openalex-snapshot
Mechanisms and consequences of widespread random monoallelic expression
inferredcites →https://doi.org/10.1038/nrg777openalex-snapshot
Patterns of linkage disequilibrium in the human genome
inferredcites →https://doi.org/10.1073/pnas.1114573108openalex-snapshot
Heterozygote advantage as a natural consequence of adaptation in diploids
inferredcites →https://doi.org/10.1073/pnas.1201904109openalex-snapshot
A public resource facilitating clinical use of genomes
inferredcites →https://doi.org/10.1073/pnas.1613365113openalex-snapshot
Deep sequencing of 10,000 human genomes
inferredcites →https://doi.org/10.1073/pnas.1702664114openalex-snapshot
Origins of coevolution between residues distant in protein 3D structures
inferredcites →https://doi.org/10.1073/pnas.232565499openalex-snapshot
Dobzhansky–Muller incompatibilities in protein evolution
inferredcites →https://doi.org/10.1093/nar/gks1200openalex-snapshot
The RCSB Protein Data Bank: new resources for research and education
inferredcites →https://doi.org/10.1101/gr.119636.110openalex-snapshot
Human population dispersal “Out of Africa” estimated from linkage disequilibrium and allele frequencies of SNPs
inferredcites →https://doi.org/10.1101/gr.125047.111openalex-snapshot
A comprehensively molecular haplotype-resolved genome of a European individual
inferredcites →https://doi.org/10.1101/gr.176601openalex-snapshot
Predicting Deleterious Amino Acid Substitutions
inferredcites →https://doi.org/10.1101/gr.3577405openalex-snapshot
Distribution and intensity of constraint in mammalian genomic sequence
inferredcites →https://doi.org/10.1111/j.2517-6161.1995.tb02031.xopenalex-snapshot
Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
inferredcites →https://doi.org/10.1126/science.1069424openalex-snapshot
The Structure of Haplotype Blocks in the Human Genome
inferredcites →https://doi.org/10.1126/science.1148910openalex-snapshot
Widespread Monoallelic Expression on Human Autosomes
inferredcites →https://doi.org/10.1126/science.1219240openalex-snapshot
Evolution and Functional Impact of Rare Coding Variation from Deep Sequencing of Human Exomes
inferredcites →https://doi.org/10.1186/s13742-016-0148-zopenalex-snapshot
The whole genome sequences and experimentally phased haplotypes of over 100 personal genomes
inferredcites →https://doi.org/10.1517/phgs.4.5.547.23791openalex-snapshot
Haplotypes and the Systematic Analysis of Genetic Variation in Genes and Genomes

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41467-018-06542-1openalex-snapshot
Haplosaurus computes protein haplotypes for use in precision drug design
inferred← citeshttps://doi.org/10.1101/810341openalex-snapshot
Accurate chromosome-scale haplotype-resolved assembly of human genomes
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.