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A Recurrent Neural Network Approach for Automated Neural Tracing in Multispectral 3D Images

https://doi.org/10.1101/230441
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Principal Curves as Skeletons of Tubular Objects
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A Broadly Applicable 3-D Neuron Tracing Method Based on Open-Curve Snake
inferredcites →https://doi.org/10.1007/s12021-011-9117-yopenalex-snapshot
The DIADEM Metric: Comparing Multiple Reconstructions of the Same Neuron
inferredcites →https://doi.org/10.1007/s12021-011-9120-3openalex-snapshot
Automated Reconstruction of Neuronal Morphology Based on Local Geometrical and Global Structural Models
inferredcites →https://doi.org/10.1007/s12021-015-9278-1openalex-snapshot
TReMAP: Automatic 3D Neuron Reconstruction Based on Tracing, Reverse Mapping and Assembling of 2D Projections
inferredcites →https://doi.org/10.1007/s12021-016-9310-0openalex-snapshot
Automated Neuron Tracing Methods: An Updated Account
inferredcites →https://doi.org/10.1007/s40708-015-0018-yopenalex-snapshot
SmartTracing: self-learning-based Neuron reconstruction
inferredcites →https://doi.org/10.1038/nature06293openalex-snapshot
Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system
inferredcites →https://doi.org/10.1038/nmeth.2450openalex-snapshot
Improved tools for the Brainbow toolbox
inferredcites →https://doi.org/10.1093/bioinformatics/btr390openalex-snapshot
Simple Neurite Tracer: open source software for reconstruction, visualization and analysis of neuronal processes
inferredcites →https://doi.org/10.1093/bioinformatics/btt170openalex-snapshot
APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree
inferredcites →https://doi.org/10.1109/cvpr.2014.81openalex-snapshot
Rich Feature Hierarchies for Accurate Object Detection and Semantic Segmentation
inferredcites →https://doi.org/10.1109/cvpr.2015.7298965openalex-snapshot
Fully convolutional networks for semantic segmentation
inferredcites →https://doi.org/10.1109/cvpr.2016.261openalex-snapshot
Recurrent Face Aging
inferredcites →https://doi.org/10.1109/cvpr.2017.115openalex-snapshot
Weakly Supervised Actor-Action Segmentation via Robust Multi-task Ranking
inferredcites →https://doi.org/10.1109/mmul.2016.49openalex-snapshot
JPEG XT: A New Family of JPEG Backward-Compatible Standards
inferredcites →https://doi.org/10.1109/mmul.2016.69openalex-snapshot
Collaborative Sparse Coding for Multiview Action Recognition
inferredcites →https://doi.org/10.1109/tip.2012.2199324openalex-snapshot
Video Denoising, Deblocking, and Enhancement Through Separable 4-D Nonlocal Spatiotemporal Transforms
inferredcites →https://doi.org/10.1109/tip.2012.2223226openalex-snapshot
Probabilistic Graphlet Transfer for Photo Cropping
inferredcites →https://doi.org/10.1109/tkde.2015.2399298openalex-snapshot
Disease Inference from Health-Related Questions via Sparse Deep Learning
inferredcites →https://doi.org/10.1109/tmm.2013.2286817openalex-snapshot
Weakly Supervised Photo Cropping
inferredcites →https://doi.org/10.1109/tmm.2013.2293424openalex-snapshot
Representative Discovery of Structure Cues for Weakly-Supervised Image Segmentation
inferredcites →https://doi.org/10.1109/tpami.2015.2477843openalex-snapshot
A Multi-Task Learning Framework for Head Pose Estimation under Target Motion
inferredcites →https://doi.org/10.1145/2964284.2964314openalex-snapshot
Micro Tells Macro
inferredcites →https://doi.org/10.1145/3065386openalex-snapshot
ImageNet classification with deep convolutional neural networks
inferredcites →https://doi.org/10.1162/neco.1997.9.8.1735openalex-snapshot
Long Short-Term Memory
inferredcites →https://doi.org/10.3389/fncir.2012.00025openalex-snapshot
Automatic Reconstruction of Neural Morphologies with Multi-Scale Tracking
inferredcites →https://doi.org/10.3389/fninf.2012.00004openalex-snapshot
Neuromantic – from Semi-Manual to Semi-Automatic Reconstruction of Neuron Morphology
inferredcites →https://doi.org/10.4230/lipics.ecoop.2020.15openalex-snapshot
Static Analysis of Shape in TensorFlow Programs
inferredcites →https://doi.org/10.48550/arxiv.1611.00388openalex-snapshot
Automated scalable segmentation of neurons from multispectral images
inferredcites →https://doi.org/10.5281/zenodo.40233openalex-snapshot
Video Denoising By Sparse 3D Transform-Domain Collaborative Filtering
inferredcites →https://doi.org/10.5555/3026877.3026899openalex-snapshot
TensorFlow: A system for large-scale machine learning

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inferred← citeshttps://doi.org/10.1016/j.bspc.2021.102829openalex-snapshot
An effective AI integrated system for neuron tracing on anisotropic electron microscopy volume
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