On the public citation graph
An atypical CRISPR-Cas locus in Symbiobacterium thermophilum flanked by a transposase, a reverse transcriptase, the endonuclease MutS2 and a putative Cas9-like protein
0 signed · 57 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/prot.20921openalex-snapshot
MUSTANG: A multiple structural alignment algorithm
inferredcites →https://doi.org/10.1007/978-3-642-65578-4_1openalex-snapshot
Reverse Transcription and the Central Dogma
inferredcites →https://doi.org/10.1007/s00239-004-0046-3openalex-snapshot
Intervening Sequences of Regularly Spaced Prokaryotic Repeats Derive from Foreign Genetic Elements
inferredcites →https://doi.org/10.1007/s13238-015-0153-5openalex-snapshot
CRISPR/Cas9-mediated gene editing in human tripronuclear zygotes
inferredcites →https://doi.org/10.1016/0092-8674(79)90228-9openalex-snapshot
DNA sequence analysis of the transposon Tn3: Three genes and three sites involved in transposition of Tn3
inferredcites →https://doi.org/10.1016/j.cell.2014.02.001openalex-snapshot
Crystal Structure of Cas9 in Complex with Guide RNA and Target DNA
inferredcites →https://doi.org/10.1016/j.dnarep.2017.07.004openalex-snapshot
Molecular basis for the functions of a bacterial MutS2 in DNA repair and recombination
inferredcites →https://doi.org/10.1016/j.gendis.2016.07.003openalex-snapshot
CRISPR-mediated genome editing and human diseases
inferredcites →https://doi.org/10.1021/bi700507dopenalex-snapshot
Stability for Function Trade-Offs in the Enolase Superfamily “Catalytic Module” ,
inferredcites →https://doi.org/10.1038/mtna.2015.37openalex-snapshot
Off-target Effects in CRISPR/Cas9-mediated Genome Engineering
inferredcites →https://doi.org/10.1038/nature09886openalex-snapshot
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
inferredcites →https://doi.org/10.1038/nature13579openalex-snapshot
Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease
inferredcites →https://doi.org/10.1038/nature15386openalex-snapshot
CRISPR-Cas immunity in prokaryotes
inferredcites →https://doi.org/10.1038/nature23305openalex-snapshot
Correction of a pathogenic gene mutation in human embryos
inferredcites →https://doi.org/10.1038/nature24268openalex-snapshot
Enhanced proofreading governs CRISPR–Cas9 targeting accuracy
inferredcites →https://doi.org/10.1038/nbt.2623openalex-snapshot
High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells
inferredcites →https://doi.org/10.1038/nbt.2842openalex-snapshot
CRISPR-Cas systems for editing, regulating and targeting genomes
inferredcites →https://doi.org/10.1038/nmeth.4262openalex-snapshot
Digenome-seq web tool for profiling CRISPR specificity
inferredcites →https://doi.org/10.1038/nmeth.4278openalex-snapshot
CIRCLE-seq: a highly sensitive in vitro screen for genome-wide CRISPR–Cas9 nuclease off-targets
inferredcites →https://doi.org/10.1038/nrmicro.2016.184openalex-snapshot
Diversity and evolution of class 2 CRISPR–Cas systems
inferredcites →https://doi.org/10.1038/nrmicro3569openalex-snapshot
An updated evolutionary classification of CRISPR–Cas systems
inferredcites →https://doi.org/10.1038/nsmb.2043openalex-snapshot
An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3
inferredcites →https://doi.org/10.1038/s41591-018-0326-xopenalex-snapshot
Identification of preexisting adaptive immunity to Cas9 proteins in humans
inferredcites →https://doi.org/10.1038/s41598-017-07828-yopenalex-snapshot
The Reverse Transcriptases Associated with CRISPR-Cas Systems
inferredcites →https://doi.org/10.1038/srep32942openalex-snapshot
CRISPRdigger: detecting CRISPRs with better direct repeat annotations
inferredcites →https://doi.org/10.1073/pnas.0401799101openalex-snapshot
Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure
inferredcites →https://doi.org/10.1074/jbc.m806755200openalex-snapshot
Crystal Structure of MutS2 Endonuclease Domain and the Mechanism of Homologous Recombination Suppression
inferredcites →https://doi.org/10.1080/15265161.2015.1104160openalex-snapshot
Human Germline CRISPR-Cas Modification: Toward a Regulatory Framework
inferredcites →https://doi.org/10.1093/bioinformatics/bti770openalex-snapshot
The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
inferredcites →https://doi.org/10.1093/nar/25.17.3389openalex-snapshot
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
inferredcites →https://doi.org/10.1093/nar/gkh830openalex-snapshot
Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism
inferredcites →https://doi.org/10.1093/nar/gkm360openalex-snapshot
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
inferredcites →https://doi.org/10.1093/nar/gku316openalex-snapshot
Deciphering key features in protein structures with the new ENDscript server
inferredcites →https://doi.org/10.1099/00207713-50-5-1829openalex-snapshot
Symbiobacterium thermophilum gen. nov., sp. nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth.
inferredcites →https://doi.org/10.1099/mic.0.28048-0openalex-snapshot
Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin
inferredcites →https://doi.org/10.1111/tpj.13207openalex-snapshot
The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non‐structural polyphenols
inferredcites →https://doi.org/10.1126/science.1138140openalex-snapshot
CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes
inferredcites →https://doi.org/10.1126/science.1179555openalex-snapshot
CRISPR/Cas, the Immune System of Bacteria and Archaea
inferredcites →https://doi.org/10.1126/science.1225829openalex-snapshot
A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity
inferredcites →https://doi.org/10.1126/science.1232033openalex-snapshot
RNA-Guided Human Genome Engineering via Cas9
inferredcites →https://doi.org/10.1126/science.2466332openalex-snapshot
Reverse Transcriptase in a Clinical Strain of Escherichia coli : Production of Branched RNA-Linked msDNA
inferredcites →https://doi.org/10.1126/science.aad4234openalex-snapshot
Direct CRISPR spacer acquisition from RNA by a natural reverse transcriptase–Cas1 fusion protein
inferredcites →https://doi.org/10.1128/jb.00682-16openalex-snapshot
MutS2 Promotes Homologous Recombination in Bacillus subtilis
inferredcites →https://doi.org/10.1128/jb.169.12.5429-5433.1987openalex-snapshot
Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product
inferredcites →https://doi.org/10.1128/mbio.00897-17openalex-snapshot
On the Origin of Reverse Transcriptase-Using CRISPR-Cas Systems and Their Hyperdiverse, Enigmatic Spacer Repertoires
inferredcites →https://doi.org/10.1186/1471-2105-8-18openalex-snapshot
PILER-CR: Fast and accurate identification of CRISPR repeats
inferredcites →https://doi.org/10.1186/1471-2105-8-209openalex-snapshot
CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats
inferredcites →https://doi.org/10.1186/1759-8753-5-23openalex-snapshot
CRISPR-Cas immunity and mobile DNA: a new superfamily of DNA transposons encoding a Cas1 endonuclease
inferredcites →https://doi.org/10.1186/s13568-015-0171-yopenalex-snapshot
Accessing inoculation methods of maize and wheat with Azospirillum brasilense
inferredcites →https://doi.org/10.1186/s13568-016-0182-3openalex-snapshot
Deep RNA-Seq profile reveals biodiversity, plant–microbe interactions and a large family of NBS-LRR resistance genes in walnut (Juglans regia) tissues
inferredcites →https://doi.org/10.12688/f1000research.6617.1openalex-snapshot
YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut
inferredcites →https://doi.org/10.1371/journal.pone.0028470openalex-snapshot
Active Site Detection by Spatial Conformity and Electrostatic Analysis—Unravelling a Proteolytic Function in Shrimp Alkaline Phosphatase
inferredcites →https://doi.org/10.1371/journal.pone.0032011openalex-snapshot
A Measure of the Promiscuity of Proteins and Characteristics of Residues in the Vicinity of the Catalytic Site That Regulate Promiscuity
inferredcites →https://doi.org/10.4161/rna.24203openalex-snapshot
crRNA and tracrRNA guide Cas9-mediated DNA interference in Streptococcus thermophilus
inferredcites →https://doi.org/10.7554/elife.06744openalex-snapshot
MutS/MutL crystal structure reveals that the MutS sliding clamp loads MutL onto DNA
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1101/263558openalex-snapshot
Reverse transcriptase fused CRISPR-Cas1 locus with RNA-seq expression necessitates revisiting hypothesis on acquisition of antibiotic resistance genes in multidrug-resistant Enterococcus faecalis V583
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.