On the public citation graph
Proteomics as a metrological tool to evaluate genome annotation accuracy following de novo genome assembly: a case study using the Atlantic bottlenose dolphin ( Tursiops truncatus )
0 signed · 36 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/pmic.201500167openalex-snapshot
Proteomic analysis of cerebrospinal fluid in California sea lions ( Zalophus californianus ) with domoic acid toxicosis identifies proteins associated with neurodegeneration
inferredcites →https://doi.org/10.1016/j.cels.2017.05.009openalex-snapshot
An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human Proteomes
inferredcites →https://doi.org/10.1016/j.ijbiomac.2017.04.071openalex-snapshot
Journey of cystatins from being mere thiol protease inhibitors to at heart of many pathological conditions
inferredcites →https://doi.org/10.1016/j.tibs.2017.01.001openalex-snapshot
A Golden Age for Working with Public Proteomics Data
inferredcites →https://doi.org/10.1016/j.tig.2015.04.007openalex-snapshot
It's more than stamp collecting: how genome sequencing can unify biological research
inferredcites →https://doi.org/10.1021/acs.jproteome.6b00988openalex-snapshot
The Hybrid Search: A Mass Spectral Library Search Method for Discovery of Modifications in Proteomics
inferredcites →https://doi.org/10.1021/acs.jproteome.7b00025openalex-snapshot
Quantitative Analysis of Human Red Blood Cell Proteome
inferredcites →https://doi.org/10.1021/acs.jproteome.7b00614openalex-snapshot
Reverse and Random Decoy Methods for False Discovery Rate Estimation in High Mass Accuracy Peptide Spectral Library Searches
inferredcites →https://doi.org/10.1021/pr500812topenalex-snapshot
Flexible and Accessible Workflows for Improved Proteogenomic Analysis Using the Galaxy Framework
inferredcites →https://doi.org/10.1038/nature10530openalex-snapshot
A high-resolution map of human evolutionary constraint using 29 mammals
inferredcites →https://doi.org/10.1038/nbt.2839openalex-snapshot
ProteomeXchange provides globally coordinated proteomics data submission and dissemination
inferredcites →https://doi.org/10.1038/ng.3198openalex-snapshot
Convergent evolution of the genomes of marine mammals
inferredcites →https://doi.org/10.1038/ng.3802openalex-snapshot
Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome
inferredcites →https://doi.org/10.1038/nmeth.1254openalex-snapshot
Building consensus spectral libraries for peptide identification in proteomics
inferredcites →https://doi.org/10.1038/srep33879openalex-snapshot
Proteomic Analysis of Non-depleted Serum Proteins from Bottlenose Dolphins Uncovers a High Vanin-1 Phenotype
inferredcites →https://doi.org/10.1039/c4ay00159aopenalex-snapshot
Quantification of total serum transferrin and transferrin sialoforms in human serum; an alternative method for the determination of carbohydrate-deficient transferrin in clinical samples
inferredcites →https://doi.org/10.1074/mcp.m112.025585openalex-snapshot
Quantitative Assessment of In-solution Digestion Efficiency Identifies Optimal Protocols for Unbiased Protein Analysis
inferredcites →https://doi.org/10.1089/cpt.2007.0517openalex-snapshot
Design and Applications of the National Institute of Standards and Technology's (NIST's) Environmental Specimen Banking Programs
inferredcites →https://doi.org/10.1093/bioinformatics/btm071openalex-snapshot
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes
inferredcites →https://doi.org/10.1093/bioinformatics/btv351openalex-snapshot
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
inferredcites →https://doi.org/10.1093/nar/gkn916openalex-snapshot
Assessing the gene space in draft genomes
inferredcites →https://doi.org/10.1093/nar/gkt1114openalex-snapshot
RefSeq: an update on mammalian reference sequences
inferredcites →https://doi.org/10.1093/nar/gkw936openalex-snapshot
The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition
inferredcites →https://doi.org/10.1101/128348openalex-snapshot
Improved de novo Genome Assembly: Linked-Read Sequencing Combined with Optical Mapping Produce a High Quality Mammalian Genome at Relatively Low Cost
inferredcites →https://doi.org/10.1101/gr.193474.115openalex-snapshot
Chromosome-scale shotgun assembly using an in vitro method for long-range linkage
inferredcites →https://doi.org/10.1186/1471-2164-15-703openalex-snapshot
Using Galaxy-P to leverage RNA-Seq for the discovery of novel protein variations
inferredcites →https://doi.org/10.1186/2047-217x-2-10openalex-snapshot
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
inferredcites →https://doi.org/10.2460/javma.235.2.194openalex-snapshot
Use of phlebotomy treatment in Atlantic bottlenose dolphins with iron overload
inferredcites →https://doi.org/10.3389/fendo.2013.00132openalex-snapshot
Ratiometric Measurements of Adiponectin by Mass Spectrometry in Bottlenose Dolphins (Tursiops truncatus) with Iron Overload Reveal an Association with Insulin Resistance and Glucagon
inferredcites →https://doi.org/10.3390/genes8120378openalex-snapshot
The Genome of the Beluga Whale (Delphinapterus leucas)
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/s10592-023-01589-0openalex-snapshot
Genome-wide analysis of the harbour porpoise (Phocoena phocoena) indicates isolation-by-distance across the North Atlantic and potential local adaptation in adjacent waters
inferred← citeshttps://doi.org/10.1021/acs.jproteome.0c00448openalex-snapshot
Proteomics in Non-model Organisms: A New Analytical Frontier
inferred← citeshttps://doi.org/10.1093/gigascience/giy168openalex-snapshot
New de novo assembly of the Atlantic bottlenose dolphin ( Tursiops truncatus ) improves genome completeness and provides haplotype phasing
inferred← citeshttps://doi.org/10.1111/1755-0998.12932openalex-snapshot
High‐quality whole‐genome sequence of an abundant Holarctic odontocete, the harbour porpoise ( Phocoena phocoena )
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.