On the public citation graph
Comprehensive functional profiling of long non-coding RNAs through a novel pan-cancer integration approach and modular analysis of their protein-coding gene association networks
0 signed · 60 inferred · view as graph
Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
Is this your work? Sign in with ORCID and put your name on the
claims that are yours.
Reference health. See whether every reference in this work resolves to a
known work and none has been retracted — and get a dated CiteStamped
badge you can embed.
What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/0471250953.bi0211s47openalex-snapshot
Using Weeder, Pscan, and PscanChIP for the Discovery of Enriched Transcription Factor Binding Site Motifs in Nucleotide Sequences
inferredcites →https://doi.org/10.1002/jcb.20458openalex-snapshot
Induction of an epithelial to mesenchymal transition in human immortal and malignant keratinocytes by TGF‐β1 involves MAPK, Smad and AP‐1 signalling pathways
inferredcites →https://doi.org/10.1007/s10549-013-2776-7openalex-snapshot
Long non-coding RNA HOTAIR is an independent prognostic marker of metastasis in estrogen receptor-positive primary breast cancer
inferredcites →https://doi.org/10.1007/s12015-007-0002-xopenalex-snapshot
The Stem Cell Identity of Testicular Cancer
inferredcites →https://doi.org/10.1007/s13277-015-4629-yopenalex-snapshot
Secretome profiling of oral squamous cell carcinoma-associated fibroblasts reveals organization and disassembly of extracellular matrix and collagen metabolic process signatures
inferredcites →https://doi.org/10.1016/j.canlet.2016.05.022openalex-snapshot
Cancer-associated fibroblasts promote hepatocellular carcinoma metastasis through chemokine-activated hedgehog and TGF-β pathways
inferredcites →https://doi.org/10.1016/j.ccell.2015.09.006openalex-snapshot
Comprehensive Genomic Characterization of Long Non-coding RNAs across Human Cancers
inferredcites →https://doi.org/10.1016/j.jtcvs.2008.11.048openalex-snapshot
Recurrent intrathoracic thymomas: Potential prognostic importance of cell-cycle protein expression
inferredcites →https://doi.org/10.1016/j.semcdb.2009.10.010openalex-snapshot
Cancer associated fibroblasts in cancer pathogenesis
inferredcites →https://doi.org/10.1016/j.tig.2014.06.001openalex-snapshot
Transcriptional regulatory functions of nuclear long noncoding RNAs
inferredcites →https://doi.org/10.1038/29814openalex-snapshot
Smad3 and Smad4 cooperate with c-Jun/c-Fos to mediate TGF-β-induced transcription
inferredcites →https://doi.org/10.1038/cdd.2014.157openalex-snapshot
Fra-1/AP-1 induces EMT in mammary epithelial cells by modulating Zeb1/2 and TGFβ expression
inferredcites →https://doi.org/10.1038/nature07672openalex-snapshot
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
inferredcites →https://doi.org/10.1038/nature08975openalex-snapshot
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
inferredcites →https://doi.org/10.1038/nature10694openalex-snapshot
Interactions between cancer stem cells and their niche govern metastatic colonization
inferredcites →https://doi.org/10.1038/nature11003openalex-snapshot
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity
inferredcites →https://doi.org/10.1038/nbt.1621openalex-snapshot
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
inferredcites →https://doi.org/10.1038/nbt.1914openalex-snapshot
Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression
inferredcites →https://doi.org/10.1038/ncomms13197openalex-snapshot
Pan-cancer transcriptomic analysis associates long non-coding RNAs with key mutational driver events
inferredcites →https://doi.org/10.1038/ncomms3612openalex-snapshot
Inferring tumour purity and stromal and immune cell admixture from expression data
inferredcites →https://doi.org/10.1038/ng.3192openalex-snapshot
The landscape of long noncoding RNAs in the human transcriptome
inferredcites →https://doi.org/10.1038/ng.710openalex-snapshot
Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells
inferredcites →https://doi.org/10.1038/nm.1908openalex-snapshot
A stroma-related gene signature predicts resistance to neoadjuvant chemotherapy in breast cancer
inferredcites →https://doi.org/10.1038/nrm3758openalex-snapshot
Molecular mechanisms of epithelial–mesenchymal transition
inferredcites →https://doi.org/10.1038/nsmb.3211openalex-snapshot
Long noncoding RNA LINP1 regulates repair of DNA double-strand breaks in triple-negative breast cancer
inferredcites →https://doi.org/10.1038/sj.onc.1204448openalex-snapshot
Smad3/AP-1 interactions control transcriptional responses to TGF-β in a promoter-specific manner
inferredcites →https://doi.org/10.1038/sj.onc.1206928openalex-snapshot
MALAT-1, a novel noncoding RNA, and thymosin β4 predict metastasis and survival in early-stage non-small cell lung cancer
inferredcites →https://doi.org/10.1073/pnas.0506580102openalex-snapshot
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
inferredcites →https://doi.org/10.1080/15476286.2015.1038012openalex-snapshot
Pan-cancer transcriptome analysis reveals long noncoding RNAs with conserved function
inferredcites →https://doi.org/10.1083/jcb.200512110openalex-snapshot
Transforming growth factor-β employs HMGA2 to elicit epithelial–mesenchymal transition
inferredcites →https://doi.org/10.1093/bioinformatics/bts635openalex-snapshot
STAR: ultrafast universal RNA-seq aligner
inferredcites →https://doi.org/10.1093/bioinformatics/btw017openalex-snapshot
lnCaNet: pan-cancer co-expression network for human lncRNA and cancer genes
inferredcites →https://doi.org/10.1093/biostatistics/kxj037openalex-snapshot
Adjusting batch effects in microarray expression data using empirical Bayes methods
inferredcites →https://doi.org/10.1093/nar/gkh408openalex-snapshot
DEQOR: a web-based tool for the design and quality control of siRNAs
inferredcites →https://doi.org/10.1093/nar/gkp427openalex-snapshot
ToppGene Suite for gene list enrichment analysis and candidate gene prioritization
inferredcites →https://doi.org/10.1093/nar/gks596openalex-snapshot
Primer3—new capabilities and interfaces
inferredcites →https://doi.org/10.1093/nar/gkt997openalex-snapshot
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles
inferredcites →https://doi.org/10.1093/nar/gnh112openalex-snapshot
Transposon Express, a software application to report the identity of insertions obtained by comprehensive transposon mutagenesis of sequenced genomes: analysis of the preference for in vitro Tn5 transposition into GC-rich DNA
inferredcites →https://doi.org/10.1101/gr.135350.111openalex-snapshot
GENCODE: The reference human genome annotation for The ENCODE Project
inferredcites →https://doi.org/10.1101/gr.180596.114openalex-snapshot
The landscape of antisense gene expression in human cancers
inferredcites →https://doi.org/10.1111/j.0959-9673.2005.00423.xopenalex-snapshot
Overexpression of Fos‐related antigen‐1 in head and neck squamous cell carcinoma
inferredcites →https://doi.org/10.1128/mcb.01038-08openalex-snapshot
Chromatin Immunoprecipitation on Microarray Analysis of Smad2/3 Binding Sites Reveals Roles of ETS1 and TFAP2A in Transforming Growth Factor β Signaling
inferredcites →https://doi.org/10.1136/jclinpath-2015-203275openalex-snapshot
Long non-coding RNA chromogenic in situ hybridisation signal pattern correlation with breast tumour pathology
inferredcites →https://doi.org/10.1158/0008-5472.can-11-1021openalex-snapshot
Long Noncoding RNA HOTAIR Regulates Polycomb-Dependent Chromatin Modification and Is Associated with Poor Prognosis in Colorectal Cancers
inferredcites →https://doi.org/10.1158/0008-5472.can-15-0273openalex-snapshot
TANRIC: An Interactive Open Platform to Explore the Function of lncRNAs in Cancer
inferredcites →https://doi.org/10.1158/2159-8290.cd-11-0209openalex-snapshot
The Emergence of lncRNAs in Cancer Biology
inferredcites →https://doi.org/10.1177/1087057115583448openalex-snapshot
Targeting Human Long Noncoding Transcripts by Endoribonuclease-Prepared siRNAs
inferredcites →https://doi.org/10.1186/1471-2105-9-559openalex-snapshot
WGCNA: an R package for weighted correlation network analysis
inferredcites →https://doi.org/10.1186/gb-2012-13-8-r75openalex-snapshot
Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers
inferredcites →https://doi.org/10.1186/s13073-016-0285-0openalex-snapshot
Long noncoding RNAs expressed in human hepatic stellate cells form networks with extracellular matrix proteins
inferredcites →https://doi.org/10.1371/journal.pone.0063243openalex-snapshot
Cancer-Associated Fibroblasts from Hepatocellular Carcinoma Promote Malignant Cell Proliferation by HGF Secretion
inferredcites →https://doi.org/10.1371/journal.pone.0066003openalex-snapshot
RNA-Seq Differentiates Tumour and Host mRNA Expression Changes Induced by Treatment of Human Tumour Xenografts with the VEGFR Tyrosine Kinase Inhibitor Cediranib
inferredcites →https://doi.org/10.1530/jme-12-0008openalex-snapshot
MEG3 noncoding RNA: a tumor suppressor
inferredcites →https://doi.org/10.18632/aging.101127openalex-snapshot
Induction of fibroblast senescence generates a non-fibrogenic myofibroblast phenotype that differentially impacts on cancer prognosis
inferredcites →https://doi.org/10.18632/oncotarget.8014openalex-snapshot
Whole transcriptome profiling of patient-derived xenograft models as a tool to identify both tumor and stromal specific biomarkers
inferredcites →https://doi.org/10.4137/cin.s14070openalex-snapshot
Co-expression Network Analysis of Human lncRNAs and Cancer Genes
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.32657/10356/138683openalex-snapshot
Differential metabolic profiles mediated SLC1A2 confer resistance in glioblastoma therapies : stratification goals and implementation
Editorial review for independent work. ICSAC — the Institute for Complexity
Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.