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Optimizing Trait Predictability in Hybrid Rice Using Superior Prediction Models and Selective Omic Datasets

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Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice
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Simultaneous improvement for four quality traits of Zhenshan 97, an elite parent of hybrid rice, by molecular marker-assisted selection
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A new AOX homologous gene OsIM1 from rice (Oryza sativa L.) with an alternative splicing mechanism under salt stress
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Transcriptome-based distance measures for grouping of germplasm and prediction of hybrid performance in maize
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Partial least squares regression, support vector machine regression, and transcriptome-based distances for prediction of maize hybrid performance with gene expression data
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Omics-based hybrid prediction in maize
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An association transcriptomics approach to the prediction of hybrid performance
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Genetical genomics: the added value from segregation
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Genetics of gene expression surveyed in maize, mouse and man
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Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement
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Genomic and metabolic prediction of complex heterotic traits in hybrid maize
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A genome-wide perspective of genetic variation in human metabolism
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A genome-wide association study of metabolic traits in human urine
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The genetics of plant metabolism
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Direct quantitative trait locus mapping of mammalian metabolic phenotypes in diabetic and normoglycemic rat models
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Genetics of global gene expression
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Mapping and analysis of quantitative trait loci in experimental populations
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Metabolome-wide association studies for agronomic traits of rice
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Improving bacterial blight resistance of‘6078′, an elite restorer line of hybrid rice, by molecular marker‐assisted selection
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Present and future of quantitative trait locus analysis in plant breeding
inferredcites →https://doi.org/10.1073/pnas.0437907100openalex-snapshot
Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid
inferredcites →https://doi.org/10.1073/pnas.0610429104openalex-snapshot
Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci
inferredcites →https://doi.org/10.1073/pnas.1005931107openalex-snapshot
Parent-independent genotyping for constructing an ultrahigh-density linkage map based on population sequencing
inferredcites →https://doi.org/10.1073/pnas.1319681110openalex-snapshot
Genetic analysis of the metabolome exemplified using a rice population
inferredcites →https://doi.org/10.1073/pnas.1514547112openalex-snapshot
Genome-based establishment of a high-yielding heterotic pattern for hybrid wheat breeding
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Variable Selection Via Gibbs Sampling
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Prediction of Total Genetic Value Using Genome-Wide Dense Marker Maps
inferredcites →https://doi.org/10.1093/genetics/162.4.1885openalex-snapshot
Genetic Dissection of an Elite Rice Hybrid Revealed That Heterozygotes Are Not Always Advantageous for Performance
inferredcites →https://doi.org/10.1093/jxb/ert464openalex-snapshot
An expression quantitative trait loci-guided co-expression analysis for constructing regulatory network using a rice recombinant inbred line population
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The Pfam protein families database: towards a more sustainable future
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Marker-assisted selection: an approach for precision plant breeding in the twenty-first century
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Regression Shrinkage and Selection Via the Lasso
inferredcites →https://doi.org/10.1111/tpj.13242openalex-snapshot
Metabolomic prediction of yield in hybrid rice
inferredcites →https://doi.org/10.1371/journal.pgen.1000282openalex-snapshot
Genetics Meets Metabolomics: A Genome-Wide Association Study of Metabolite Profiles in Human Serum
inferredcites →https://doi.org/10.1371/journal.pgen.1004982openalex-snapshot
Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines
inferredcites →https://doi.org/10.1371/journal.pone.0005220openalex-snapshot
Improved Heterosis Prediction by Combining Information on DNA- and Metabolic Markers
inferredcites →https://doi.org/10.1371/journal.pone.0017595openalex-snapshot
Gains in QTL Detection Using an Ultra-High Density SNP Map Based on Population Sequencing Relative to Traditional RFLP/SSR Markers
inferredcites →https://doi.org/10.1534/genetics.105.041103openalex-snapshot
Genetical Genomics Analysis of a Yeast Segregant Population for Transcription Network Inference
inferredcites →https://doi.org/10.18637/jss.v011.i08openalex-snapshot
FlexMix: A General Framework for Finite Mixture Models and Latent Class Regression in R
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kernlab - An S4 Package for Kernel Methods in R
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The pls Package: Principal Component and Partial Least Squares Regression in R
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Regularization Paths for Generalized Linear Models via Coordinate Descent
inferredcites →https://doi.org/10.2135/cropsci2000.401239xopenalex-snapshot
Improvement of Bacterial Blight Resistance of ‘Minghui 63’, an Elite Restorer Line of Hybrid Rice, by Molecular Marker‐Assisted Selection
inferredcites →https://doi.org/10.2135/cropsci2011.06.0297openalex-snapshot
Genomic Selection in Plant Breeding: A Comparison of Models
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