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Genetic sequences are two-dimensional

https://doi.org/10.1101/299867
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/geno.1997.5153openalex-snapshot
Minisatellite Origins in Yeast and Humans
inferredcites →https://doi.org/10.1006/jmbi.2000.5197openalex-snapshot
Automatic clustering of orthologs and in-paralogs from pairwise species comparisons
inferredcites →https://doi.org/10.1007/s00239-010-9377-4openalex-snapshot
Mutation Biases and Mutation Rate Variation Around Very Short Human Microsatellites Revealed by Human–Chimpanzee–Orangutan Genomic Sequence Alignments
inferredcites →https://doi.org/10.1016/0022-2836(70)90057-4openalex-snapshot
A general method applicable to the search for similarities in the amino acid sequence of two proteins
inferredcites →https://doi.org/10.1016/0022-2836(81)90087-5openalex-snapshot
Identification of common molecular subsequences
inferredcites →https://doi.org/10.1016/j.ydbio.2013.03.002openalex-snapshot
A Schnurri/Mad/Medea complex attenuates the dorsal–twist gradient readout at vnd
inferredcites →https://doi.org/10.1038/365274a0openalex-snapshot
Destabilization of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repair
inferredcites →https://doi.org/10.1038/nchembio.127openalex-snapshot
Malleable machines take shape in eukaryotic transcriptional regulation
inferredcites →https://doi.org/10.1038/ncomms1102openalex-snapshot
Dynamic evolution of precise regulatory encodings creates the clustered site signature of enhancers
inferredcites →https://doi.org/10.1073/pnas.0400611101openalex-snapshot
Coordinate enhancers share common organizational features in the Drosophila genome
inferredcites →https://doi.org/10.1073/pnas.69.1.4openalex-snapshot
Matching Sequences under Deletion/Insertion Constraints
inferredcites →https://doi.org/10.1093/bioinformatics/btn104openalex-snapshot
Combining statistical alignment and phylogenetic footprinting to detect regulatory elements
inferredcites →https://doi.org/10.1093/gbe/evs116openalex-snapshot
Distinct Mutational Behaviors Differentiate Short Tandem Repeats from Microsatellites in the Human Genome
inferredcites →https://doi.org/10.1093/nar/gkl996openalex-snapshot
Ensembl 2007
inferredcites →https://doi.org/10.1093/nar/gku212openalex-snapshot
Large-scale analysis of tandem repeat variability in the human genome
inferredcites →https://doi.org/10.1101/gr.122937.111openalex-snapshot
A matter of life or death: How microsatellites emerge in and vanish from the human genome
inferredcites →https://doi.org/10.1101/gr.1933104openalex-snapshot
Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner
inferredcites →https://doi.org/10.1146/annurev-genet-072610-155046openalex-snapshot
Variable Tandem Repeats Accelerate Evolution of Coding and Regulatory Sequences
inferredcites →https://doi.org/10.1186/s12859-017-1665-1openalex-snapshot
Solving the master equation for Indels
inferredcites →https://doi.org/10.1371/journal.pcbi.1000243openalex-snapshot
Malleable Machines in Transcription Regulation: The Mediator Complex
inferredcites →https://doi.org/10.1371/journal.pone.0101177openalex-snapshot
Microsatellite Repeat Instability Fuels Evolution of Embryonic Enhancers in Hawaiian Drosophila
inferredcites →https://doi.org/10.1534/g3.115.021659openalex-snapshot
The Nature, Extent, and Consequences of Genetic Variation in the opa Repeats of Notch in Drosophila
inferredcites →https://doi.org/10.2307/2280633openalex-snapshot
Statistical Tables for Biological, Agricultural and Medical Research.

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inferred← citeshttps://doi.org/10.1101/593228openalex-snapshot
Maximal homology alignment: A new method based on two-dimensional homology
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