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BGEN: a binary file format for imputed genotype and haplotype data

https://doi.org/10.1101/308296
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Fine-mapping type 2 diabetes loci to single-variant resolution using high-density imputation and islet-specific epigenome maps
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ALSPAC–The Avon Longitudinal Study of Parents and Children
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PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses
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RegScan: a GWAS tool for quick estimation of allele effects on continuous traits and their combinations
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Mega2: data-handling for facilitating genetic linkage and association analyses
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Tabix: fast retrieval of sequence features from generic TAB-delimited files
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The variant call format and VCFtools
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Efficient haplotype matching and storage using the positional Burrows–Wheeler transform (PBWT)
inferredcites →https://doi.org/10.1093/bioinformatics/btv613openalex-snapshot
BGT: efficient and flexible genotype query across many samples
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Rcpp : Seamless R and C++ Integration
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R: A Language and Environment for Statistical Computing

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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