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Transcribed microsatellite allele lengths are often correlated with gene expression levels in natural sunflower populations

https://doi.org/10.1101/339903
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-94-017-0443-4_7openalex-snapshot
Tuning Function of Tandemly Repeating Sequences: A Molecular Device for Fast Adaptation
inferredcites →https://doi.org/10.1007/bf00196228openalex-snapshot
Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved ?chromatin folding code?
inferredcites →https://doi.org/10.1007/bf00253881openalex-snapshot
Long-term selection for a quantitative character in large replicate populations of Drosophila melanogaster
inferredcites →https://doi.org/10.1007/bf02342746openalex-snapshot
Length polymorphism in the threonine-glycine-encoding repeat region of theperiod gene inDrosophila
inferredcites →https://doi.org/10.1007/s001220200002openalex-snapshot
Microsatellite polymorphism in natural populations of wild emmer wheat, Triticum dicoccoides, in Israel
inferredcites →https://doi.org/10.1007/s12041-014-0402-zopenalex-snapshot
Patterns of microsatellite evolution inferred from the Helianthus annuus (Asteraceae) transcriptome
inferredcites →https://doi.org/10.1016/0092-8674(91)90397-hopenalex-snapshot
Identification of a gene (FMR-1) containing a CGG repeat coincident with a breakpoint cluster region exhibiting length variation in fragile X syndrome
inferredcites →https://doi.org/10.1016/0169-5347(96)10049-5openalex-snapshot
Microsatellites, from molecules to populations and back
inferredcites →https://doi.org/10.1016/j.molcel.2015.07.003openalex-snapshot
Variable Glutamine-Rich Repeats Modulate Transcription Factor Activity
inferredcites →https://doi.org/10.1016/j.tig.2006.03.005openalex-snapshot
Simple sequence repeats as advantageous mutators in evolution
inferredcites →https://doi.org/10.1016/s0014-5793(99)00863-7openalex-snapshot
Shortened microsatellite d(CA)21 sequence down‐regulates promoter activity of matrix metalloproteinase 9 gene
inferredcites →https://doi.org/10.1016/s0021-9258(18)68106-2openalex-snapshot
Mutagenesis by transient misalignment.
inferredcites →https://doi.org/10.1016/s0160-9327(97)01005-3openalex-snapshot
Evolutionary tuning knobs
inferredcites →https://doi.org/10.1016/s0167-4781(98)00056-6openalex-snapshot
Minimum CAG repeat in the human calmodulin-1 gene 5′ untranslated region is required for full expression
inferredcites →https://doi.org/10.1016/s0168-9525(00)89154-4openalex-snapshot
The genetic basis of quantitative variation: numbers of sensory bristles of Drosophila melanogaster as a model system
inferredcites →https://doi.org/10.1016/s0960-9822(00)00005-1openalex-snapshot
Adaptive evolution of highly mutable loci in pathogenic bacteria
inferredcites →https://doi.org/10.1038/msb.2012.7openalex-snapshot
A regulatory role for repeated decoy transcription factor binding sites in target gene expression
inferredcites →https://doi.org/10.1038/nbt.1883openalex-snapshot
Full-length transcriptome assembly from RNA-Seq data without a reference genome
inferredcites →https://doi.org/10.1038/ng.3461openalex-snapshot
Abundant contribution of short tandem repeats to gene expression variation in humans
inferredcites →https://doi.org/10.1038/ng0893-398openalex-snapshot
The relationship between trinucleotide (CAG) repeat length and clinical features of Huntington's disease
inferredcites →https://doi.org/10.1038/ng0994-88openalex-snapshot
Length of uninterrupted CGG repeats determines instability in the FMR1 gene
inferredcites →https://doi.org/10.1038/ng1193-254openalex-snapshot
Evidence for a mechanism predisposing to intergenerational CAG repeat instability in spinocerebellar ataxia type I
inferredcites →https://doi.org/10.1038/ng1618openalex-snapshot
Intragenic tandem repeats generate functional variability
inferredcites →https://doi.org/10.1038/ng822openalex-snapshot
Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes
inferredcites →https://doi.org/10.1038/ng836openalex-snapshot
A polymorphic microsatellite that mediates induction of PIG3 by p53
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
inferredcites →https://doi.org/10.1038/nrg1348openalex-snapshot
Microsatellites: simple sequences with complex evolution
inferredcites →https://doi.org/10.1038/srep33280openalex-snapshot
A polymorphic (GA/CT)n- SSR influences promoter activity of Tryptophan decarboxylase gene in Catharanthus roseus L. Don
inferredcites →https://doi.org/10.1046/j.1365-294x.2002.01643.xopenalex-snapshot
Microsatellites: genomic distribution, putative functions and mutational mechanisms: a review
inferredcites →https://doi.org/10.1073/pnas.0408118101openalex-snapshot
Molecular origins of rapid and continuous morphological evolution
inferredcites →https://doi.org/10.1086/303399openalex-snapshot
Adaptive Evolution of Seed Oils in Plants: Accounting for the Biogeographic Distribution of Saturated and Unsaturated Fatty Acids in Seed Oils
inferredcites →https://doi.org/10.1093/bioinformatics/bti610openalex-snapshot
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
inferredcites →https://doi.org/10.1093/bioinformatics/btm157openalex-snapshot
SciRoKo: a new tool for whole genome microsatellite search and investigation
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/genetics/124.3.773openalex-snapshot
Pleiotropic models of quantitative variation.
inferredcites →https://doi.org/10.1093/genetics/163.1.103openalex-snapshot
Roles for WHITE COLLAR-1 in Circadian and General Photoperception in Neurospora crassa
inferredcites →https://doi.org/10.1093/molbev/msh073openalex-snapshot
Microsatellites Within Genes: Structure, Function, and Evolution
inferredcites →https://doi.org/10.1093/nar/12.10.4127openalex-snapshot
Simple sequences are ubiquitous repetitive components of eukaryotic genomes
inferredcites →https://doi.org/10.1093/nar/19.14.4008openalex-snapshot
‘Touchdown’ PCR to circumvent spurious priming during gene amplification
inferredcites →https://doi.org/10.1093/nar/25.17.3389openalex-snapshot
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
inferredcites →https://doi.org/10.1093/nar/27.2.573openalex-snapshot
Tandem repeats finder: a program to analyze DNA sequences
inferredcites →https://doi.org/10.1093/nar/gks596openalex-snapshot
Primer3—new capabilities and interfaces
inferredcites →https://doi.org/10.1093/nar/gks981openalex-snapshot
Accurate human microsatellite genotypes from high-throughput resequencing data using informed error profiles
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026142openalex-snapshot
Distribution of dinucleotide microsatellites in the Drosophila melanogaster genome
inferredcites →https://doi.org/10.1098/rstb.2009.0282openalex-snapshot
The population genetics of beneficial mutations
inferredcites →https://doi.org/10.1101/gr.10.7.967openalex-snapshot
Microsatellites in Different Eukaryotic Genomes: Survey and Analysis
inferredcites →https://doi.org/10.1104/pp.110.162933openalex-snapshot
Microsatellite Instability in Arabidopsis Increases with Plant Development
inferredcites →https://doi.org/10.1111/1467-9868.00346openalex-snapshot
A Direct Approach to False Discovery Rates
inferredcites →https://doi.org/10.1111/j.1095-8312.2005.00425.xopenalex-snapshot
Genomic microsatellite adaptive divergence of wild barley by microclimatic stress in ‘Evolution Canyon’, Israel
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05166.xopenalex-snapshot
Connecting the sun to flowering in sunflower adaptation
inferredcites →https://doi.org/10.1111/j.1365-313x.2010.04338.xopenalex-snapshot
The multiple origins of aluminium resistance in hexaploid wheat include Aegilops tauschii and more recent cis mutations to TaALMT1
inferredcites →https://doi.org/10.1111/j.1601-183x.2012.00799.xopenalex-snapshot
A polymorphic indel containing the RS3 microsatellite in the 5′ flanking region of the vasopressin V1a receptor gene is associated with chimpanzee (Pan troglodytes) personality
inferredcites →https://doi.org/10.1111/mec.14522openalex-snapshot
Transcriptome profiles of sunflower reveal the potential role of microsatellites in gene expression divergence
inferredcites →https://doi.org/10.1126/science.1111427openalex-snapshot
Microsatellite Instability Generates Diversity in Brain and Sociobehavioral Traits
inferredcites →https://doi.org/10.1126/science.1170097openalex-snapshot
Unstable Tandem Repeats in Promoters Confer Transcriptional Evolvability
inferredcites →https://doi.org/10.1128/jb.181.3.1035-1038.1999openalex-snapshot
Archaeal Nucleosome Positioning by CTG Repeats
inferredcites →https://doi.org/10.1128/mcb.00624-10openalex-snapshot
Analysis of CUGBP1 Targets Identifies GU-Repeat Sequences That Mediate Rapid mRNA Decay
inferredcites →https://doi.org/10.1136/jmg.34.8.627openalex-snapshot
The effect of FMR1 CGG repeat interruptions on mutation frequency as measured by sperm typing.
inferredcites →https://doi.org/10.1146/annurev-genet-072610-155046openalex-snapshot
Variable Tandem Repeats Accelerate Evolution of Coding and Regulatory Sequences
inferredcites →https://doi.org/10.1146/annurev.genet.40.110405.090442openalex-snapshot
Bacterial Contingency Loci: The Role of Simple Sequence DNA Repeats in Bacterial Adaptation
inferredcites →https://doi.org/10.1152/physiolgenomics.00105.2001openalex-snapshot
Microsatellite variation associated with prolactin expression and growth of salt-challenged tilapia
inferredcites →https://doi.org/10.1158/0008-5472.can-09-0986openalex-snapshot
An A13 Repeat within the 3′-Untranslated Region of Epidermal Growth Factor Receptor (EGFR) Is Frequently Mutated in Microsatellite Instability Colon Cancers and Is Associated with Increased EGFR Expression
inferredcites →https://doi.org/10.1186/gb-2002-3-3-reviews0004openalex-snapshot
Untranslated regions of mRNAs.
inferredcites →https://doi.org/10.1186/gb-2006-7-2-r14openalex-snapshot
Distinct patterns of SSR distribution in the Arabidopsis thalianaand rice genomes
inferredcites →https://doi.org/10.1371/journal.pone.0007715openalex-snapshot
Screening for Microsatellite Instability Identifies Frequent 3′-Untranslated Region Mutation of the RB1-Inducible Coiled-Coil 1 Gene in Colon Tumors
inferredcites →https://doi.org/10.1371/journal.pone.0021800openalex-snapshot
REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
inferredcites →https://doi.org/10.1371/journal.pone.0144108openalex-snapshot
Evolution Analysis of Simple Sequence Repeats in Plant Genome
inferredcites →https://doi.org/10.2135/1974.seventygenerationsopenalex-snapshot
Seventy Generations of Selection for Oil and Protein in Maize
inferredcites →https://doi.org/10.2741/2422openalex-snapshot
Chromatin structure of repeating CTG/CAG and CGG/CCG sequences in human disease
inferredcites →https://doi.org/10.3732/ajb.1200045openalex-snapshot
Gene expression assays for actin, ubiquitin, and three microsatellite‐encoding genes in Helianthus annuus (Asteraceae)

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.tree.2020.03.002openalex-snapshot
A Roadmap for Understanding the Evolutionary Significance of Structural Genomic Variation
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