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PI(4,5)P 2 Binding Sites in the Ebola Virus Matrix Protein Modulate Assembly and Budding

https://doi.org/10.1101/341248
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Scalable molecular dynamics with NAMD
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GROMACS: Fast, flexible, and free
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CHARMM‐GUI: A web‐based graphical user interface for CHARMM
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Interdomain salt‐bridges in the Ebola virus protein VP40 and their role in domain association and plasma membrane localization
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Human Metabolism of Dietary Quercetin Glycosides
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Liposome-Binding Assays to Assess Specificity and Affinity of Phospholipid–Protein Interactions
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Monitoring Peripheral Protein Oligomerization on Biological Membranes
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Filoviruses: Ecology, Molecular Biology, and Evolution
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No exit: Targeting the budding process to inhibit filovirus replication
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Membrane association and localization dynamics of the Ebola virus matrix protein VP40
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Investigation of Ebola VP40 Assembly and Oligomerization in Live Cells Using Number and Brightness Analysis
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Structural Rearrangement of Ebola Virus VP40 Begets Multiple Functions in the Virus Life Cycle
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Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone
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Cellular and molecular interactions of phosphoinositides and peripheral proteins
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GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers
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Nuclear phosphoinositides: a signaling enigma wrapped in a compartmental conundrum
inferredcites →https://doi.org/10.1016/j.virusres.2004.08.014openalex-snapshot
Filovirus budding
inferredcites →https://doi.org/10.1016/s0968-0896(01)00275-9openalex-snapshot
Antimicrobial and Anti-Lipase Activity of Quercetin and its C2-C16 3-O-Acyl-Esters
inferredcites →https://doi.org/10.1016/s0968-0896(98)00099-6openalex-snapshot
A molecular gate which controls unnatural ATP analogue recognition by the tyrosine kinase v-Src
inferredcites →https://doi.org/10.1016/s0969-2126(03)00050-9openalex-snapshot
The Matrix Protein VP40 from Ebola Virus Octamerizes into Pore-like Structures with Specific RNA Binding Properties
inferredcites →https://doi.org/10.1021/jf061478aopenalex-snapshot
Flavonoid Content of U.S. Fruits, Vegetables, and Nuts
inferredcites →https://doi.org/10.1038/srep01206openalex-snapshot
The spatio-temporal distribution dynamics of Ebola virus proteins and RNA in infected cells
inferredcites →https://doi.org/10.1038/srep19125openalex-snapshot
The Ebola Virus matrix protein, VP40, requires phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) for extensive oligomerization at the plasma membrane and viral egress
inferredcites →https://doi.org/10.1039/c6cp03776copenalex-snapshot
The Ebola virus protein VP40 hexamer enhances the clustering of PI(4,5)P 2 lipids in the plasma membrane
inferredcites →https://doi.org/10.1042/bst0240785openalex-snapshot
Role of dietary flavonoids in protection against cancer and coronary heart disease
inferredcites →https://doi.org/10.1074/jbc.m112.443960openalex-snapshot
The Ebola Virus Matrix Protein Penetrates into the Plasma Membrane
inferredcites →https://doi.org/10.1074/jbc.m116.758300openalex-snapshot
Detection of lipid-induced structural changes of the Marburg virus matrix protein VP40 using hydrogen/deuterium exchange-mass spectrometry
inferredcites →https://doi.org/10.1074/jbc.m117.816280openalex-snapshot
A cationic, C-terminal patch and structural rearrangements in Ebola virus matrix VP40 protein control its interactions with phosphatidylserine
inferredcites →https://doi.org/10.1080/10715760100301441openalex-snapshot
Human metabolism of dietary flavonoids: Identification of plasma metabolites of quercetin
inferredcites →https://doi.org/10.1080/21645515.2018.1473698openalex-snapshot
The vesicular stomatitis virus-based Ebola virus vaccine: From concept to clinical trials
inferredcites →https://doi.org/10.1093/emboj/19.16.4228openalex-snapshot
Crystal structure of the matrix protein VP40 from Ebola virus
inferredcites →https://doi.org/10.1124/mol.112.082834openalex-snapshot
Inhibitors of PI(4,5)P2 Synthesis Reveal Dynamic Regulation of IgE Receptor Signaling by Phosphoinositides in RBL Mast Cells
inferredcites →https://doi.org/10.1126/science.1259657openalex-snapshot
Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak
inferredcites →https://doi.org/10.1128/jvi.00591-14openalex-snapshot
Small-Molecule Probes Targeting the Viral PPxY-Host Nedd4 Interface Block Egress of a Broad Range of RNA Viruses
inferredcites →https://doi.org/10.1128/jvi.01087-15openalex-snapshot
Host Cell Plasma Membrane Phosphatidylserine Regulates the Assembly and Budding of Ebola Virus
inferredcites →https://doi.org/10.1128/jvi.02607-15openalex-snapshot
Investigation of the Lipid Binding Properties of the Marburg Virus Matrix Protein VP40
inferredcites →https://doi.org/10.1128/jvi.75.11.5205-5214.2001openalex-snapshot
Ebola Virus VP40-Induced Particle Formation and Association with the Lipid Bilayer
inferredcites →https://doi.org/10.1128/jvi.76.10.4855-4865.2002openalex-snapshot
Ebola Virus VP40 Drives the Formation of Virus-Like Filamentous Particles Along with GP
inferredcites →https://doi.org/10.1128/mbio.02227-14openalex-snapshot
Evaluation of the Potential Impact of Ebola Virus Genomic Drift on the Efficacy of Sequence-Based Candidate Therapeutics
inferredcites →https://doi.org/10.1371/journal.pntd.0006349openalex-snapshot
Ebolaviruses: New roles for old proteins
inferredcites →https://doi.org/10.1371/journal.ppat.0020099openalex-snapshot
Assembly and Budding of Ebolavirus
inferredcites →https://doi.org/10.1517/14728222.2014.863877openalex-snapshot
Could the Ebola virus matrix protein VP40 be a drug target?
inferredcites →https://doi.org/10.1529/biophysj.107.114645openalex-snapshot
Mapping the Number of Molecules and Brightness in the Laser Scanning Microscope
inferredcites →https://doi.org/10.2217/fvl.15.6openalex-snapshot
The Multifunctional Ebola Virus VP40 Matrix Protein is a Promising Therapeutic Target
inferredcites →https://doi.org/10.3389/fmicb.2014.00300openalex-snapshot
Membrane binding and bending in Ebola VP40 assembly and egress
inferredcites →https://doi.org/10.3390/v6103837openalex-snapshot
A Loop Region in the N-Terminal Domain of Ebola Virus VP40 Is Important in Viral Assembly, Budding, and Egress
inferredcites →https://doi.org/10.7717/peerj.1674openalex-snapshot
Initiating a watch list for Ebola virus antibody escape mutations

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1021/acs.jpcb.3c01759openalex-snapshot
Elucidating Residue-Level Determinants Affecting Dimerization of Ebola Virus Matrix Protein Using High-Throughput Site Saturation Mutagenesis and Biophysical Approaches
inferred← citeshttps://doi.org/10.1101/2021.06.08.447555openalex-snapshot
The Ebola virus matrix protein clusters phosphatidylserine, a critical step in viral budding
inferred← citeshttps://doi.org/10.1101/2021.12.30.474523openalex-snapshot
A nano-liquid hub integrating growth and immune-evasion signaling to promote cell survival
inferred← citeshttps://doi.org/10.15252/embr.202051709openalex-snapshot
Phosphatidylserine clustering by the Ebola virus matrix protein is a critical step in viral budding
inferred← citeshttps://doi.org/10.3390/v13071375openalex-snapshot
Cysteine Mutations in the Ebolavirus Matrix Protein VP40 Promote Phosphatidylserine Binding by Increasing the Flexibility of a Lipid-Binding Loop
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