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Dynamism and context dependency in the diversification of the megadiverse plant genus Solanum L. (Solanaceae)

https://doi.org/10.1101/348961
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Eggplant origins: Out of Africa, into the Orient
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Molecular delimitation of clades within New World species of the "spiny solanums" ( Solanum subg. Leptostemonum )
inferredcites →https://doi.org/10.1007/s11033-011-0675-8openalex-snapshot
Phylogeny of kangaroo apples (Solanum subg. Archaesolanum, Solanaceae)
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Estimating diversification rates from phylogenetic information
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Diversity dynamics: molecular phylogenies need the fossil record
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The Evolving Theory of Evolutionary Radiations
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A congruent molecular signature of vicariance across multiple plant lineages
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Natural clades differ from “random” clades: simulations and analyses
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Continental Drift: Continental Drift and the Age of Angiosperm Genera
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Analysis of an evolutionary species–area relationship
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Three keys to the radiation of angiosperms into freezing environments
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Rates of speciation and morphological evolution are correlated across the largest vertebrate radiation
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The biogeographic regions reconsidered
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Phylogenetic revision of Backhousieae (Myrtaceae): Neogene divergence, a revised circumscription of Backhousia and two new species
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Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates
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Mammalian phylogeny reveals recent diversification rate shifts
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Critically evaluating the theory and performance of Bayesian analysis of macroevolutionary mixtures
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Contingent Predictability in Evolution: Key Traits and Diversification
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Stochastic Mapping of Morphological Characters
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The Maximum Likelihood Approach to Reconstructing Ancestral Character States of Discrete Characters on Phylogenies
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Testing Whether Certain Traits have Caused Amplified Diversification: An Improved Method Based on a Model of Random Speciation and Extinction
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Environment, Area, and Diversification in the Species‐Rich Flowering Plant Family Iridaceae
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Clade Age and Not Diversification Rate Explains Species Richness among Animal Taxa
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Correlates of Diversification in the Plant Clade Dipsacales: Geographic Movement and Evolutionary Innovations
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Stochastic Models of Phylogeny and the Evolution of Diversity
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Adaptive Radiation, Ecological Opportunity, and Evolutionary Determinism
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The Causes Of Species Richness Patterns Across Space, Time, And Clades And The Role Of “Ecological Limits”
inferredcites →https://doi.org/10.1093/bioinformatics/btg180openalex-snapshot
MrBayes 3: Bayesian phylogenetic inference under mixed models
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TESS: an R package for efficiently simulating phylogenetic trees and performing Bayesian inference of lineage diversification rates
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Inferring Speciation and Extinction Rates under Different Sampling Schemes
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The Ecology of Adaptive Radiation
inferredcites →https://doi.org/10.1093/oso/9780198549857.003.0010openalex-snapshot
Using interspecies phylogenies to test macroevolutionary hypotheses
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Dispersal-Vicariance Analysis: A New Approach to the Quantification of Historical Biogeography
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When Can Decreasing Diversification Rates Be Detected with Molecular Phylogenies and the Fossil Record?
inferredcites →https://doi.org/10.1093/sysbio/syt034openalex-snapshot
Identifying Hidden Rate Changes in the Evolution of a Binary Morphological Character: The Evolution of Plant Habit in Campanulid Angiosperms
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Bayesian Analysis of Biogeography when the Number of Areas is Large
inferredcites →https://doi.org/10.1093/sysbio/syw021openalex-snapshot
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
inferredcites →https://doi.org/10.1098/rspb.2007.0924openalex-snapshot
Exceptional among-lineage variation in diversification rates during the radiation of Australia's most diverse vertebrate clade
inferredcites →https://doi.org/10.1098/rspb.2016.0181openalex-snapshot
Convergence across a continent: adaptive diversification in a recent radiation of Australian lizards
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Radiation of the Australian flora: what can comparisons of molecular phylogenies across multiple taxa tell us about the evolution of diversity in present–day communities?
inferredcites →https://doi.org/10.1111/1365-2745.12208openalex-snapshot
Functional distinctiveness of major plant lineages
inferredcites →https://doi.org/10.1111/2041-210x.12117openalex-snapshot
PASTIS : an R package to facilitate phylogenetic assembly with soft taxonomic inferences
inferredcites →https://doi.org/10.1111/2041-210x.12199openalex-snapshot
BAMM tools: an R package for the analysis of evolutionary dynamics on phylogenetic trees
inferredcites →https://doi.org/10.1111/boj.12053openalex-snapshot
African spinySolanum(subgenusLeptostemonum, Solanaceae): a thorny phylogenetic tangle
inferredcites →https://doi.org/10.1111/boj.12412openalex-snapshot
Tropical Asian species show that the Old World clade of ‘spiny solanums’ (SolanumsubgenusLeptostemonum pro parte: Solanaceae) is not monophyletic
inferredcites →https://doi.org/10.1111/ele.12251openalex-snapshot
Phylogenetic approaches for studying diversification
inferredcites →https://doi.org/10.1111/ele.12503openalex-snapshot
Faster diversification on land than sea helps explain global biodiversity patterns among habitats and animal phyla
inferredcites →https://doi.org/10.1111/evo.12817openalex-snapshot
No substitute for real data: A cautionary note on the use of phylogenies from birth-death polytomy resolvers for downstream comparative analyses
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A LIKELIHOOD FRAMEWORK FOR INFERRING THE EVOLUTION OF GEOGRAPHIC RANGE ON PHYLOGENETIC TREES
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Decline of a biome: evolution, contraction, fragmentation, extinction and invasion of the Australian mesic zone biota
inferredcites →https://doi.org/10.1111/j.1365-294x.2008.03899.xopenalex-snapshot
Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota
inferredcites →https://doi.org/10.1111/j.1420-9101.2010.02029.xopenalex-snapshot
Ecological opportunity and the origin of adaptive radiations
inferredcites →https://doi.org/10.1111/j.1558-5646.2009.00926.xopenalex-snapshot
EXTINCTION RATES SHOULD NOT BE ESTIMATED FROM MOLECULAR PHYLOGENIES
inferredcites →https://doi.org/10.1111/jbi.12898openalex-snapshot
Bayesian estimation of the global biogeographical history of the Solanaceae
inferredcites →https://doi.org/10.1111/jeb.12139openalex-snapshot
Recovering speciation and extinction dynamics based on phylogenies
inferredcites →https://doi.org/10.1111/jeb.12979openalex-snapshot
The impact of rate heterogeneity on inference of phylogenetic models of trait evolution
inferredcites →https://doi.org/10.1111/nph.13367openalex-snapshot
Confluence, synnovation, and depauperons in plant diversification
inferredcites →https://doi.org/10.1126/science.1084786openalex-snapshot
Tempo and Mode of Evolutionary Radiation in Iguanian Lizards
inferredcites →https://doi.org/10.1126/science.1135590openalex-snapshot
The Latitudinal Gradient in Recent Speciation and Extinction Rates of Birds and Mammals
inferredcites →https://doi.org/10.1146/annurev-ecolsys-110512-135910openalex-snapshot
How Was the Australian Flora Assembled Over the Last 65 Million Years? A Molecular Phylogenetic Perspective
inferredcites →https://doi.org/10.1186/1471-2148-13-214openalex-snapshot
A phylogenetic framework for evolutionary study of the nightshades (Solanaceae): a dated 1000-tip tree
inferredcites →https://doi.org/10.1371/journal.pone.0089543openalex-snapshot
Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees
inferredcites →https://doi.org/10.1600/036364407781179671openalex-snapshot
A Three-Gene Phylogeny of the Genus Solanum (Solanaceae)
inferredcites →https://doi.org/10.1666/0094-8373(2005)031[0077:kicasm]2.0.co;2openalex-snapshot
Key innovations, convergence, and success: macroevolutionary lessons from plant phylogeny
inferredcites →https://doi.org/10.2307/2418356openalex-snapshot
Phylogeny in Solanum sect. Lasiocarpa (Solanaceae): Congruence of Morphological and Molecular Data
inferredcites →https://doi.org/10.2307/2418419openalex-snapshot
Allozyme Variation and Evolution in Solanum Section Androceras
inferredcites →https://doi.org/10.2307/2419675openalex-snapshot
Implications for the Phylogeny, Classification, and Biogeography of Solanum from cpDNA Restriction Site Variation
inferredcites →https://doi.org/10.2307/3802723openalex-snapshot
Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach
inferredcites →https://doi.org/10.2307/4135449openalex-snapshot
History and concepts of big plant genera
inferredcites →https://doi.org/10.3732/ajb.93.1.157openalex-snapshot
Phylogenetic relationships among the “spiny solanums” ( Solanum subgenus Leptostemonum , Solanaceae)
inferredcites →https://doi.org/10.3732/ajb.93.9.1328openalex-snapshot
Molecular phylogeny and dating reveals an Oligo‐Miocene radiation of dry‐adapted shrubs (former Tremandraceae) from rainforest tree progenitors (Elaeocarpaceae) in Australia
inferredcites →https://doi.org/10.3897/phytokeys.66.8457openalex-snapshot
A revision of the “African Non-Spiny” Clade of Solanum L. (Solanum sections Afrosolanum Bitter, Benderianum Bitter, Lemurisolanum Bitter, Lyciosolanum Bitter, Macronesiotes Bitter, and Quadrangulare Bitter: Solanaceae)
inferredcites →https://doi.org/10.5962/p.299696openalex-snapshot
The taxonomy and ecology of Solanum subg. Leptostemonum (Dunal) Bitter (Solanaceae) in Queensland and far north-eastern New South Wales, Australia
inferredcites →https://doi.org/10.7312/simp93764openalex-snapshot
The Major Features of Evolution

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/978-3-030-29493-9_2openalex-snapshot
Biodiversity of Nicotiana (Solanaceae)
inferred← citeshttps://doi.org/10.1007/978-3-319-99208-2_10openalex-snapshot
Eggplants and Relatives: From Exploring Their Diversity and Phylogenetic Relationships to Conservation Challenges
inferred← citeshttps://doi.org/10.1007/978-3-319-99208-2_11openalex-snapshot
Crossability and Diversity of Eggplants and Their Wild Relatives
inferred← citeshttps://doi.org/10.1007/978-3-319-99208-2_2openalex-snapshot
Eggplant (Solanum melongena L.): Taxonomy and Relationships
inferred← citeshttps://doi.org/10.1016/j.pbi.2019.03.005openalex-snapshot
Tip of the trichome: evolution of acylsugar metabolic diversity in Solanaceae
inferred← citeshttps://doi.org/10.1071/bt20022openalex-snapshot
The origins and evolutionary history of xerophytic vegetation in Australia
inferred← citeshttps://doi.org/10.1093/botlinnean/boaa024openalex-snapshot
Extensive plastid-nuclear discordance in a recent radiation ofNicotianasectionSuaveolentes(Solanaceae)
inferred← citeshttps://doi.org/10.1111/jse.12549openalex-snapshot
A tale of worldwide success: Behind the scenes of Carex (Cyperaceae) biogeography and diversification
inferred← citeshttps://doi.org/10.3390/genes12030381openalex-snapshot
The Diversity of Plant Sex Chromosomes Highlighted through Advances in Genome Sequencing
inferred← citeshttps://doi.org/10.3390/plants9030403openalex-snapshot
Heterosis Breeding in Eggplant (Solanum melongena L.): Gains and Provocations
inferred← citeshttps://doi.org/10.3897/phytokeys.127.34326openalex-snapshot
Dichotomous keys to the species of Solanum L. (Solanaceae) in continental Africa, Madagascar (incl. the Indian Ocean islands), Macaronesia and the Cape Verde Islands
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