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An unbiased template of the Drosophila brain and ventral nerve cord

https://doi.org/10.1101/376384
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Identifying global anatomical differences: Deformation-based morphometry
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Automated Talairach Atlas labels for functional brain mapping
inferredcites →https://doi.org/10.1002/cne.22346openalex-snapshot
Average shape standard atlas for the adult Drosophila ventral nerve cord
inferredcites →https://doi.org/10.1007/978-1-4939-7265-4openalex-snapshot
Super-Resolution Microscopy
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Synthesis of Janelia Fluor HaloTag and SNAP-Tag Ligands and Their Use in Cellular Imaging Experiments
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A system for quantitative morphological measurement and electrotonic modelling of neurons: three-dimensional reconstruction
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Co-planar stereotaxic atlas of the human brain
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Neural Circuitry that Governs Drosophila Male Courtship Behavior
inferredcites →https://doi.org/10.1016/j.cell.2007.01.040openalex-snapshot
Comprehensive Maps of Drosophila Higher Olfactory Centers: Spatially Segregated Fruit and Pheromone Representation
inferredcites →https://doi.org/10.1016/j.cell.2017.06.032openalex-snapshot
Mapping the Neural Substrates of Behavior
inferredcites →https://doi.org/10.1016/j.cell.2018.06.019openalex-snapshot
A Complete Electron Microscopy Volume of the Brain of Adult Drosophila melanogaster
inferredcites →https://doi.org/10.1016/j.celrep.2012.09.011openalex-snapshot
A GAL4-Driver Line Resource for Drosophila Neurobiology
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A review of atlas-based segmentation for magnetic resonance brain images
inferredcites →https://doi.org/10.1016/j.cois.2017.09.011openalex-snapshot
Learning from connectomics on the fly
inferredcites →https://doi.org/10.1016/j.cub.2010.07.045openalex-snapshot
Sexual Dimorphism in the Fly Brain
inferredcites →https://doi.org/10.1016/j.cub.2010.11.056openalex-snapshot
Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution
inferredcites →https://doi.org/10.1016/j.cub.2013.02.057openalex-snapshot
Clonal Development and Organization of the Adult Drosophila Central Brain
inferredcites →https://doi.org/10.1016/j.cub.2016.05.052openalex-snapshot
Automatic Segmentation of Drosophila Neural Compartments Using GAL4 Expression Data Reveals Novel Visual Pathways
inferredcites →https://doi.org/10.1016/j.jsb.2010.04.012openalex-snapshot
Fully automatic stitching and distortion correction of transmission electron microscope images
inferredcites →https://doi.org/10.1016/j.media.2007.06.004openalex-snapshot
Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain
inferredcites →https://doi.org/10.1016/j.media.2015.06.012openalex-snapshot
Multi-atlas segmentation of biomedical images: A survey
inferredcites →https://doi.org/10.1016/j.neuroimage.2004.07.010openalex-snapshot
Geodesic estimation for large deformation anatomical shape averaging and interpolation
inferredcites →https://doi.org/10.1016/j.neuroimage.2009.09.062openalex-snapshot
The optimal template effect in hippocampus studies of diseased populations
inferredcites →https://doi.org/10.1016/j.neuroimage.2010.09.025openalex-snapshot
A reproducible evaluation of ANTs similarity metric performance in brain image registration
inferredcites →https://doi.org/10.1016/j.neuron.2006.08.028openalex-snapshot
Refined Spatial Manipulation of Neuronal Function by Combinatorial Restriction of Transgene Expression
inferredcites →https://doi.org/10.1016/j.neuron.2013.12.017openalex-snapshot
A Systematic Nomenclature for the Insect Brain
inferredcites →https://doi.org/10.1016/j.neuron.2016.06.012openalex-snapshot
NBLAST: Rapid, Sensitive Comparison of Neuronal Structure and Construction of Neuron Family Databases
inferredcites →https://doi.org/10.1016/s0960-9822(02)00656-5openalex-snapshot
The Drosophila Standard Brain
inferredcites →https://doi.org/10.1038/427605aopenalex-snapshot
Brain asymmetry and long-term memory
inferredcites →https://doi.org/10.1038/nature05453openalex-snapshot
Genome-wide atlas of gene expression in the adult mouse brain
inferredcites →https://doi.org/10.1038/nmeth.1366openalex-snapshot
A 3D digital atlas of C. elegans and its application to single-cell analyses
inferredcites →https://doi.org/10.1038/nmeth.1602openalex-snapshot
BrainAligner: 3D registration atlases of Drosophila brains
inferredcites →https://doi.org/10.1038/nmeth.2019openalex-snapshot
Fiji: an open-source platform for biological-image analysis
inferredcites →https://doi.org/10.1038/s41593-019-0413-4openalex-snapshot
State-dependent decoupling of sensory and motor circuits underlies behavioral flexibility in Drosophila
inferredcites →https://doi.org/10.1073/pnas.1411087111openalex-snapshot
Ultrafast tissue staining with chemical tags
inferredcites →https://doi.org/10.1073/pnas.1506763112openalex-snapshot
Optimized tools for multicolor stochastic labeling reveal diverse stereotyped cell arrangements in the fly visual system
inferredcites →https://doi.org/10.1093/bioinformatics/btp184openalex-snapshot
Globally optimal stitching of tiled 3D microscopic image acquisitions
inferredcites →https://doi.org/10.1093/bioinformatics/bts543openalex-snapshot
ImgLib2—generic image processing in Java
inferredcites →https://doi.org/10.1101/122952openalex-snapshot
A Systematic Nomenclature for the Drosophila Ventral Nervous System
inferredcites →https://doi.org/10.1101/198648openalex-snapshot
The VT GAL4, LexA, and split-GAL4 driver line collections for targeted expression in the Drosophila nervous system
inferredcites →https://doi.org/10.1109/isbi.2016.7493463openalex-snapshot
Robust registration of calcium images by learned contrast synthesis
inferredcites →https://doi.org/10.1109/isbi.2017.7950553openalex-snapshot
Group-wise 3D registration based templates to study the evolution of ant worker neuroanatomy
inferredcites →https://doi.org/10.1109/mcse.2007.55openalex-snapshot
Matplotlib: A 2D Graphics Environment
inferredcites →https://doi.org/10.1109/titb.2003.808506openalex-snapshot
Nonrigid image registration in shared-memory multiprocessor environments with application to brains, breasts, and bees
inferredcites →https://doi.org/10.1109/tmi.2009.2035616openalex-snapshot
elastix: A Toolbox for Intensity-Based Medical Image Registration
inferredcites →https://doi.org/10.1109/tmi.2011.2163944openalex-snapshot
Image Similarity and Tissue Overlaps as Surrogates for Image Registration Accuracy: Widely Used but Unreliable
inferredcites →https://doi.org/10.1109/tmi.2013.2265603openalex-snapshot
Deformable Medical Image Registration: A Survey
inferredcites →https://doi.org/10.1111/tpj.12738openalex-snapshot
A direction‐selective local‐thresholding method, DSLT , in combination with a dye‐based method for automated three‐dimensional segmentation of cells and airspaces in developing leaves
inferredcites →https://doi.org/10.1126/science.1126308openalex-snapshot
Bruchpilot Promotes Active Zone Assembly, Ca 2+ Channel Clustering, and Vesicle Release
inferredcites →https://doi.org/10.1242/dev.111.1.79openalex-snapshot
The origin of postembryonic neuroblasts in the ventral nerve cord of Drosophila melanogaster
inferredcites →https://doi.org/10.1242/jeb.164954openalex-snapshot
Of what use is connectomics? A personal perspective on theDrosophilaconnectome
inferredcites →https://doi.org/10.1371/journal.pone.0038011openalex-snapshot
TrakEM2 Software for Neural Circuit Reconstruction
inferredcites →https://doi.org/10.1534/genetics.110.119917openalex-snapshot
Refinement of Tools for Targeted Gene Expression in Drosophila
inferredcites →https://doi.org/10.25080/majora-92bf1922-00aopenalex-snapshot
Data Structures for Statistical Computing in Python
inferredcites →https://doi.org/10.3389/fninf.2018.00013openalex-snapshot
A Statistically Representative Atlas for Mapping Neuronal Circuits in the Drosophila Adult Brain
inferredcites →https://doi.org/10.7554/elife.04577openalex-snapshot
The neuronal architecture of the mushroom body provides a logic for associative learning
inferredcites →https://doi.org/10.7554/elife.12059openalex-snapshot
Quantitative neuroanatomy for connectomics in Drosophila
inferredcites →https://doi.org/10.7554/elife.13399openalex-snapshot
Lineage mapping identifies molecular and architectural similarities between the larval and adult Drosophila central nervous system

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.cell.2020.12.013openalex-snapshot
Reconstruction of motor control circuits in adult Drosophila using automated transmission electron microscopy
inferred← citeshttps://doi.org/10.1016/j.cub.2019.11.004openalex-snapshot
TwoLumps Ascending Neurons Mediate Touch-Evoked Reversal of Walking Direction in Drosophila
inferred← citeshttps://doi.org/10.1016/j.neuron.2020.08.005openalex-snapshot
A Systematic Nomenclature for the Drosophila Ventral Nerve Cord
inferred← citeshttps://doi.org/10.1101/006353openalex-snapshot
The natverse: a versatile computational toolbox to combine and analyse neuroanatomical data
inferred← citeshttps://doi.org/10.1101/2020.01.21.911859openalex-snapshot
A Connectome of the Adult Drosophila Central Brain
inferred← citeshttps://doi.org/10.1101/2020.06.08.141341openalex-snapshot
Convergence of distinct subpopulations of mechanosensory neurons onto a neural circuit that elicits grooming
inferred← citeshttps://doi.org/10.1101/2020.08.29.273276openalex-snapshot
The connectome of the adult Drosophila mushroom body: implications for function
inferred← citeshttps://doi.org/10.3389/fphys.2023.1076533openalex-snapshot
Virtual Fly Brain—An interactive atlas of the Drosophila nervous system
inferred← citeshttps://doi.org/10.7554/elife.52701openalex-snapshot
Sex-determining genes distinctly regulate courtship capability and target preference via sexually dimorphic neurons
inferred← citeshttps://doi.org/10.7554/elife.52702openalex-snapshot
Layered roles of fruitless isoforms in specification and function of male aggression-promoting neurons in Drosophila
inferred← citeshttps://doi.org/10.7554/elife.53350openalex-snapshot
The natverse, a versatile toolbox for combining and analysing neuroanatomical data
inferred← citeshttps://doi.org/10.7554/elife.57443openalex-snapshot
A connectome and analysis of the adult Drosophila central brain
inferred← citeshttps://doi.org/10.7554/elife.57685openalex-snapshot
Spatial readout of visual looming in the central brain of Drosophila
inferred← citeshttps://doi.org/10.7554/elife.59976openalex-snapshot
Distinct subpopulations of mechanosensory chordotonal organ neurons elicit grooming of the fruit fly antennae
inferred← citeshttps://doi.org/10.7554/elife.60299openalex-snapshot
Central processing of leg proprioception in Drosophila
inferred← citeshttps://doi.org/10.7554/elife.62576openalex-snapshot
The connectome of the adult Drosophila mushroom body provides insights into function
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