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Inferring macro-ecological patterns from local species' occurrences

https://doi.org/10.1101/387456
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/9781118445112.stat03432openalex-snapshot
Species Estimation and Applications
inferredcites →https://doi.org/10.1002/9781118445112.stat03432.pub2openalex-snapshot
Species Richness: Estimation and Comparison
inferredcites →https://doi.org/10.1002/ece3.1092openalex-snapshot
Neutral theory and the species abundance distribution: recent developments and prospects for unifying niche and neutral perspectives
inferredcites →https://doi.org/10.1002/ecm.1284openalex-snapshot
Upscaling biodiversity: estimating the species–area relationship from small samples
inferredcites →https://doi.org/10.1002/ecy.1813openalex-snapshot
Estimating species richness in hyper‐diverse large tree communities
inferredcites →https://doi.org/10.1006/jtbi.2000.2158openalex-snapshot
Species-area Curves, Spatial Aggregation, and Habitat Specialization in Tropical Forests
inferredcites →https://doi.org/10.1016/j.jtbi.2007.04.006openalex-snapshot
Sampling species abundance distributions: Resolving the veil-line debate
inferredcites →https://doi.org/10.1016/j.spasta.2016.02.006openalex-snapshot
Application of optimal data-based binning method to spatial analysis of ecological datasets
inferredcites →https://doi.org/10.1016/j.tpb.2018.01.001openalex-snapshot
The distance decay of similarity in tropical rainforests. A spatial point processes analytical formulation
inferredcites →https://doi.org/10.1038/ismej.2011.208openalex-snapshot
Selection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences
inferredcites →https://doi.org/10.1038/nature04030openalex-snapshot
Density dependence explains tree species abundance and diversity in tropical forests
inferredcites →https://doi.org/10.1038/nature04826openalex-snapshot
Comparing models of species abundance
inferredcites →https://doi.org/10.1038/nature06197openalex-snapshot
Patterns of relative species abundance in rainforests and coral reefs
inferredcites →https://doi.org/10.1038/nature12438openalex-snapshot
Emergence of structural and dynamical properties of ecological mutualistic networks
inferredcites →https://doi.org/10.1038/nature24621openalex-snapshot
A communal catalogue reveals Earth’s multiscale microbial diversity
inferredcites →https://doi.org/10.1038/ncomms11257openalex-snapshot
Fast and sensitive taxonomic classification for metagenomics with Kaiju
inferredcites →https://doi.org/10.1073/pnas.0807815106openalex-snapshot
Estimating the number of unseen variants in the human genome
inferredcites →https://doi.org/10.1073/pnas.1119651109openalex-snapshot
Dendritic connectivity controls biodiversity patterns in experimental metacommunities
inferredcites →https://doi.org/10.1073/pnas.1423147112openalex-snapshot
An estimate of the number of tropical tree species
inferredcites →https://doi.org/10.1073/pnas.1518922113openalex-snapshot
Geomorphic controls on elevational gradients of species richness
inferredcites →https://doi.org/10.1073/pnas.1521291113openalex-snapshot
Scaling laws predict global microbial diversity
inferredcites →https://doi.org/10.1073/pnas.1607774113openalex-snapshot
Optimal prediction of the number of unseen species
inferredcites →https://doi.org/10.1080/01621459.1993.10594330openalex-snapshot
Estimating the Number of Species: A Review
inferredcites →https://doi.org/10.1086/303403openalex-snapshot
Estimating Species Abundance from Occurrence
inferredcites →https://doi.org/10.1086/377190openalex-snapshot
Occupancy, Spatial Variance, and the Abundance of Species
inferredcites →https://doi.org/10.1093/bioinformatics/bts075openalex-snapshot
Estimating population diversity with CatchAll
inferredcites →https://doi.org/10.1093/biomet/43.1-2.45openalex-snapshot
THE NUMBER OF NEW SPECIES, AND THE INCREASE IN POPULATION COVERAGE, WHEN A SAMPLE IS INCREASED
inferredcites →https://doi.org/10.1098/rstb.1994.0091openalex-snapshot
Estimating terrestrial biodiversity through extrapolation
inferredcites →https://doi.org/10.1103/physreve.92.022722openalex-snapshot
Neutral dynamics with environmental noise: Age-size statistics and species lifetimes
inferredcites →https://doi.org/10.1103/physrevlett.91.198103openalex-snapshot
Percolation Theory for the Distribution and Abundance of Species
inferredcites →https://doi.org/10.1103/revmodphys.88.035003openalex-snapshot
Statistical mechanics of ecological systems: Neutral theory and beyond
inferredcites →https://doi.org/10.1111/2041-210x.12319openalex-snapshot
Towards a unified descriptive theory for spatial ecology: predicting biodiversity patterns across spatial scales
inferredcites →https://doi.org/10.1111/j.0006-341x.2002.00531.xopenalex-snapshot
Estimating the Number of Species in a Stochastic Abundance Model
inferredcites →https://doi.org/10.1111/j.0269-8463.2005.00930.xopenalex-snapshot
Species abundance distributions: pattern or process?
inferredcites →https://doi.org/10.1111/j.1365-3032.1941.tb00970.xopenalex-snapshot
THE DISTRIBUTION OF BUTTERFLIES IN THE MALAY PENINSULA (LEPID.)
inferredcites →https://doi.org/10.1111/j.1366-9516.2005.00127.xopenalex-snapshot
Limits to the estimation of species richness: The use of relative abundance distributions
inferredcites →https://doi.org/10.1111/j.1442-9993.2005.01502.xopenalex-snapshot
Measuring Biological Diversity
inferredcites →https://doi.org/10.1111/j.1461-0248.2003.00566.xopenalex-snapshot
Neutral theory and community ecology
inferredcites →https://doi.org/10.1111/j.1461-0248.2007.01127.xopenalex-snapshot
The implicit assumption of symmetry and the species abundance distribution
inferredcites →https://doi.org/10.1111/j.1461-0248.2009.01328.xopenalex-snapshot
Biodiversity scales from plots to biomes with a universal species–area curve
inferredcites →https://doi.org/10.1111/j.2006.0906-7590.04596.xopenalex-snapshot
Novel methods improve prediction of species’ distributions from occurrence data
inferredcites →https://doi.org/10.1126/sciadv.1701438openalex-snapshot
Upscaling species richness and abundances in tropical forests
inferredcites →https://doi.org/10.1126/science.1243092openalex-snapshot
Hyperdominance in the Amazonian Tree Flora
inferredcites →https://doi.org/10.1126/science.1261605openalex-snapshot
Eukaryotic plankton diversity in the sunlit ocean
inferredcites →https://doi.org/10.1128/aem.67.10.4399-4406.2001openalex-snapshot
Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity
inferredcites →https://doi.org/10.1198/016214504000002005openalex-snapshot
A Penalized Nonparametric Maximum Likelihood Approach to Species Richness Estimation
inferredcites →https://doi.org/10.1890/0012-9658(2003)084[0777:eafrpa]2.0.co;2openalex-snapshot
ESTIMATING ABUNDANCE FROM REPEATED PRESENCE–ABSENCE DATA OR POINT COUNTS
inferredcites →https://doi.org/10.1890/02-0558openalex-snapshot
ESTIMATING SPECIES RICHNESS: SENSITIVITY TO SAMPLE COVERAGE AND INSENSITIVITY TO SPATIAL PATTERNS
inferredcites →https://doi.org/10.1890/03-0557openalex-snapshot
INTERPOLATING, EXTRAPOLATING, AND COMPARING INCIDENCE-BASED SPECIES ACCUMULATION CURVES
inferredcites →https://doi.org/10.1890/04-1078openalex-snapshot
ESTIMATION OF SPECIES RICHNESS: MIXTURE MODELS, THE ROLE OF RARE SPECIES, AND INFERENTIAL CHALLENGES
inferredcites →https://doi.org/10.1890/07-1526.1openalex-snapshot
AN INCIDENCE-BASED RICHNESS ESTIMATOR FOR QUADRATS SAMPLED WITHOUT REPLACEMENT
inferredcites →https://doi.org/10.1890/07-2147.1openalex-snapshot
Sufficient sampling for asymptotic minimum species richness estimators
inferredcites →https://doi.org/10.2307/1411openalex-snapshot
The Relation Between the Number of Species and the Number of Individuals in a Random Sample of an Animal Population
inferredcites →https://doi.org/10.5860/choice.42-1547openalex-snapshot
Measuring biological diversity
inferredcites →https://doi.org/10.7287/peerj.preprints.1451v1openalex-snapshot
Scaling laws predict global microbial diversity

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/ecy.70258openalex-snapshot
Landscape structure and species life history affect abundance‐occupancy relationships
inferred← citeshttps://doi.org/10.1371/journal.pone.0253461openalex-snapshot
Upscaling human activity data: A statistical ecology approach
inferred← citeshttps://doi.org/10.24072/pci.ecology.100009openalex-snapshot
Upscaling the neighborhood: how to get species diversity, abundance and range distributions from local presence/absence data
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