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Powerful and interpretable behavioural features for quantitative phenotyping of C. elegans

https://doi.org/10.1101/389023
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/0010-4825(85)90058-7openalex-snapshot
Using a microcomputer and video camera to simultaneously track 25 animals
inferredcites →https://doi.org/10.1016/j.jneumeth.2018.02.005openalex-snapshot
Massively parallel C. elegans tracking provides multi-dimensional fingerprints for phenotypic discovery
inferredcites →https://doi.org/10.1016/j.neuron.2014.09.005openalex-snapshot
Toward a Science of Computational Ethology
inferredcites →https://doi.org/10.1016/s0065-308x(08)60319-xopenalex-snapshot
Behavioural Analysis of Nematode Movement
inferredcites →https://doi.org/10.1016/s0092-8674(00)81609-8openalex-snapshot
Natural Variation in a Neuropeptide Y Receptor Homolog Modifies Social Behavior and Food Response in C. elegans
inferredcites →https://doi.org/10.1016/s0165-0270(02)00117-6openalex-snapshot
Using machine vision to analyze and classify Caenorhabditis elegans behavioral phenotypes quantitatively
inferredcites →https://doi.org/10.1016/s0896-6273(00)80527-9openalex-snapshot
Control of Alternative Behavioral States by Serotonin in Caenorhabditis elegans
inferredcites →https://doi.org/10.1017/s003118200004628xopenalex-snapshot
Inherent movement patterns of larval nematodes, with a stochastic model to simulate movement of infective hookworm larvae
inferredcites →https://doi.org/10.1038/nature14539openalex-snapshot
Deep learning
inferredcites →https://doi.org/10.1038/nmeth.1625openalex-snapshot
High-throughput behavioral analysis in C. elegans
inferredcites →https://doi.org/10.1038/nmeth.2560openalex-snapshot
A database of Caenorhabditis elegans behavioral phenotypes
inferredcites →https://doi.org/10.1038/nn.3812openalex-snapshot
Big behavioral data: psychology, ethology and the foundations of neuroscience
inferredcites →https://doi.org/10.1038/nrg2897openalex-snapshot
Phenomics: the next challenge
inferredcites →https://doi.org/10.1038/s41567-018-0093-0openalex-snapshot
Ethology as a physical science
inferredcites →https://doi.org/10.1038/s41592-018-0112-1openalex-snapshot
An open-source platform for analyzing and sharing worm-behavior data
inferredcites →https://doi.org/10.1051/medsci/20031967725openalex-snapshot
C. elegans : des neurones et des gènes
inferredcites →https://doi.org/10.1073/pnas.0906195106openalex-snapshot
Numbering the hairs on our heads: The shared challenge and promise of phenomics
inferredcites →https://doi.org/10.1073/pnas.1007868108openalex-snapshot
Emergence of long timescales and stereotyped behaviors in Caenorhabditis elegans
inferredcites →https://doi.org/10.1073/pnas.1211447110openalex-snapshot
A dictionary of behavioral motifs reveals clusters of genes affecting Caenorhabditis elegans locomotion
inferredcites →https://doi.org/10.1073/pnas.1310468110openalex-snapshot
Systematic profiling of C aenorhabditis elegans locomotive behaviors reveals additional components in G-protein Gαq signaling
inferredcites →https://doi.org/10.1093/genetics/165.3.1117openalex-snapshot
Quantitative Classification and Natural Clustering of Caenorhabditis elegans Behavioral Phenotypes
inferredcites →https://doi.org/10.1093/genetics/77.1.71openalex-snapshot
THE GENETICS OF CAENORHABDITIS ELEGANS
inferredcites →https://doi.org/10.1098/rsif.2013.1092openalex-snapshot
Mechanistic analysis of the search behaviour of Caenorhabditis elegans
inferredcites →https://doi.org/10.1111/j.1469-7998.1975.tb03191.xopenalex-snapshot
Components and patterns in the behaviour of the nematode Caenorhabditis elegans
inferredcites →https://doi.org/10.1111/j.2517-6161.1995.tb02031.xopenalex-snapshot
Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
inferredcites →https://doi.org/10.1163/187529267x00616openalex-snapshot
Acclimatization in the Eccritic Thermal Response of Ditylenchus Dipsaci
inferredcites →https://doi.org/10.1163/187529267x00869openalex-snapshot
The Mechanism of Orientation in Nematodes
inferredcites →https://doi.org/10.1177/074823379000600306openalex-snapshot
A Promising Indicator of Neurobehavioral Toxicity Using the Nematode Caenorhabditis Elegans and Computer Tracking
inferredcites →https://doi.org/10.1186/1471-2105-5-115openalex-snapshot
An imaging system for standardized quantitative analysis of C. elegans behavior
inferredcites →https://doi.org/10.1186/1471-2202-8-86openalex-snapshot
Nemo: a computational tool for analyzing nematode locomotion
inferredcites →https://doi.org/10.1186/s12915-017-0363-9openalex-snapshot
A multi-animal tracker for studying complex behaviors
inferredcites →https://doi.org/10.1371/journal.pcbi.1000028openalex-snapshot
Dimensionality and Dynamics in the Behavior of C. elegans
inferredcites →https://doi.org/10.1371/journal.pcbi.1003702openalex-snapshot
CeleST: Computer Vision Software for Quantitative Analysis of C. elegans Swim Behavior Reveals Novel Features of Locomotion
inferredcites →https://doi.org/10.1371/journal.pcbi.1004322openalex-snapshot
Changes in Postural Syntax Characterize Sensory Modulation and Natural Variation of C. elegans Locomotion
inferredcites →https://doi.org/10.1371/journal.pcbi.1004517openalex-snapshot
A Generative Statistical Algorithm for Automatic Detection of Complex Postures
inferredcites →https://doi.org/10.1371/journal.pone.0002208openalex-snapshot
The Parallel Worm Tracker: A Platform for Measuring Average Speed and Drug-Induced Paralysis in Nematodes
inferredcites →https://doi.org/10.1371/journal.pone.0011631openalex-snapshot
Multi-Environment Model Estimation for Motility Analysis of Caenorhabditis elegans
inferredcites →https://doi.org/10.1371/journal.pone.0069653openalex-snapshot
Track-A-Worm, An Open-Source System for Quantitative Assessment of C. elegans Locomotory and Bending Behavior
inferredcites →https://doi.org/10.1371/journal.pone.0122326openalex-snapshot
Model-Independent Phenotyping of C. elegans Locomotion Using Scale-Invariant Feature Transform
inferredcites →https://doi.org/10.1385/1-59745-151-7:241openalex-snapshot
Automated Imaging of C. elegans Behavior
inferredcites →https://doi.org/10.1523/jneurosci.19-21-09557.1999openalex-snapshot
The Fundamental Role of Pirouettes in Caenorhabditis elegans Chemotaxis
inferredcites →https://doi.org/10.3389/fncom.2014.00137openalex-snapshot
OpenWorm: an open-science approach to modeling Caenorhabditis elegans
inferredcites →https://doi.org/10.7554/elife.00782openalex-snapshot
A longitudinal study of Caenorhabditis elegans larvae reveals a novel locomotion switch, regulated by Gαs signaling
inferredcites →https://doi.org/10.7554/elife.17227openalex-snapshot
Resolving coiled shapes reveals new reorientation behaviors in C. elegans

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1093/genetics/iyag281openalex-snapshot
Autocrine feedback maintains homeostatic neuropeptide expression in a peptidergic hub neuron
inferred← citeshttps://doi.org/10.1101/2022.07.14.500040openalex-snapshot
Multisite gating in tonic sensory circuits integrates multimodal context to control persistent behavioral states
inferred← citeshttps://doi.org/10.1101/2023.01.12.523604openalex-snapshot
Restructuring of an asymmetric neural circuit during associative learning
inferred← citeshttps://doi.org/10.1371/journal.pbio.3001744openalex-snapshot
Comprehensive analysis of locomotion dynamics in the protochordate Ciona intestinalis reveals how neuromodulators flexibly shape its behavioral repertoire
inferred← citeshttps://doi.org/10.3389/frai.2026.1789644openalex-snapshot
Systematic review of artificial intelligence use in behavioral analysis of invertebrate and larval model organisms: methods, applications and future recommendations
inferred← citeshttps://doi.org/10.7554/elife.59464openalex-snapshot
Establishment and maintenance of motor neuron identity via temporal modularity in terminal selector function
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