On the public citation graph

Resolving within-host malaria parasite diversity using single-cell sequencing

https://doi.org/10.1101/391268
0 signed · 52 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.ijpara.2007.05.003openalex-snapshot
Quantitative dissection of clone-specific growth rates in cultured malaria parasites
inferredcites →https://doi.org/10.1017/s0031182000059217openalex-snapshot
The epidemiology of multiple-clone Plasmodium falciparum infections in Gambian patients
inferredcites →https://doi.org/10.1038/nature01097openalex-snapshot
Genome sequence of the human malaria parasite Plasmodium falciparum
inferredcites →https://doi.org/10.1038/nature06954openalex-snapshot
Sex ratio adjustment and kin discrimination in malaria parasites
inferredcites →https://doi.org/10.1038/nature11174openalex-snapshot
Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing
inferredcites →https://doi.org/10.1038/ng.3599openalex-snapshot
Genomic analysis of local variation and recent evolution in Plasmodium vivax
inferredcites →https://doi.org/10.1038/ng1924openalex-snapshot
Genome-wide variation and identification of vaccine targets in the Plasmodium falciparum genome
inferredcites →https://doi.org/10.1038/nm.2368openalex-snapshot
Host-mediated regulation of superinfection in malaria
inferredcites →https://doi.org/10.1038/nrg3187openalex-snapshot
Harnessing genomics and genome biology to understand malaria biology
inferredcites →https://doi.org/10.1038/s41467-018-03807-7openalex-snapshot
Host-mediated selection impacts the diversity of Plasmodium falciparum antigens within infections
inferredcites →https://doi.org/10.1073/pnas.0500078102openalex-snapshot
Virulence and competitive ability in genetically diverse malaria infections
inferredcites →https://doi.org/10.1073/pnas.0702715104openalex-snapshot
Population genetic structure of Plasmodium falciparum in the two main African vectors, Anopheles gambiae and Anopheles funestus
inferredcites →https://doi.org/10.1073/pnas.0707766104openalex-snapshot
Competitive release and facilitation of drug-resistant parasites after therapeutic chemotherapy in a rodent malaria model
inferredcites →https://doi.org/10.1093/bioinformatics/btu005openalex-snapshot
estMOI: estimating multiplicity of infection using parasite deep sequencing data
inferredcites →https://doi.org/10.1093/bioinformatics/btx145openalex-snapshot
SeqArray—a storage-efficient high-performance data format for WGS variant calls
inferredcites →https://doi.org/10.1093/bioinformatics/btx530openalex-snapshot
Deconvolution of multiple infections in Plasmodium falciparum from high throughput sequencing data
inferredcites →https://doi.org/10.1093/gbe/evx256openalex-snapshot
High-Resolution Single-Cell Sequencing of Malaria Parasites
inferredcites →https://doi.org/10.1098/rspb.2007.0873openalex-snapshot
Transmission stage investment of malaria parasites in response to in-host competition
inferredcites →https://doi.org/10.1098/rspb.2012.0113openalex-snapshot
Close kinship within multiple-genotype malaria parasite infections
inferredcites →https://doi.org/10.1101/gr.094052.109openalex-snapshot
Fast model-based estimation of ancestry in unrelated individuals
inferredcites →https://doi.org/10.1101/gr.115972.110openalex-snapshot
Maximum-likelihood estimation of recent shared ancestry (ERSA)
inferredcites →https://doi.org/10.1101/gr.168286.113openalex-snapshot
Single-cell genomics for dissection of complex malaria infections
inferredcites →https://doi.org/10.1101/gr.203711.115openalex-snapshot
Indels, structural variation, and recombination drive genomic diversity in Plasmodium falciparum
inferredcites →https://doi.org/10.1111/j.0014-3820.2006.tb01215.xopenalex-snapshot
WITHIN-HOST COMPETITION IN GENETICALLY DIVERSE MALARIA INFECTIONS: PARASITE VIRULENCE AND COMPETITIVE SUCCESS
inferredcites →https://doi.org/10.1126/science.7015505openalex-snapshot
Cloning of Naturally Occurring Mixed Infections of Malaria Parasites
inferredcites →https://doi.org/10.1186/1475-2875-11-380openalex-snapshot
Entomological indices of malaria transmission in Chikhwawa district, Southern Malawi
inferredcites →https://doi.org/10.1186/1475-2875-11-41openalex-snapshot
Using CF11 cellulose columns to inexpensively and effectively remove human DNA from Plasmodium falciparum-infected whole blood samples
inferredcites →https://doi.org/10.1186/1475-2875-14-4openalex-snapshot
COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data
inferredcites →https://doi.org/10.1186/gb-2008-9-12-r171openalex-snapshot
Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparumpopulation divergence
inferredcites →https://doi.org/10.1186/gb-2011-12-4-r33openalex-snapshot
High recombination rates and hotspots in a Plasmodium falciparum genetic cross
inferredcites →https://doi.org/10.1186/s12936-018-2349-7openalex-snapshot
hmmIBD: software to infer pairwise identity by descent between haploid genotypes
inferredcites →https://doi.org/10.1186/s13073-017-0398-0openalex-snapshot
Genetic relatedness analysis reveals the cotransmission of genetically related Plasmodium falciparum parasites in Thiès, Senegal
inferredcites →https://doi.org/10.1371/journal.pbio.0030335openalex-snapshot
Recombination Hotspots and Population Structure in Plasmodium falciparum
inferredcites →https://doi.org/10.1371/journal.pcbi.1004824openalex-snapshot
Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data
inferredcites →https://doi.org/10.1371/journal.pcbi.1005348openalex-snapshot
THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites
inferredcites →https://doi.org/10.1371/journal.pcbi.1005923openalex-snapshot
Modeling the genetic relatedness of Plasmodium falciparum parasites following meiotic recombination and cotransmission
inferredcites →https://doi.org/10.1371/journal.pgen.1004144openalex-snapshot
Relationship Estimation from Whole-Genome Sequence Data
inferredcites →https://doi.org/10.1371/journal.pgen.1007279openalex-snapshot
Identity-by-descent analyses for measuring population dynamics and selection in recombining pathogens
inferredcites →https://doi.org/10.1371/journal.pone.0032891openalex-snapshot
Characterization of Within-Host Plasmodium falciparum Diversity Using Next-Generation Sequence Data

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1021/acsinfecdis.9b00093openalex-snapshot
Post-Genomic Approaches to Understanding Malaria Parasite Biology: Linking Genes to Biological Functions
inferred← citeshttps://doi.org/10.1038/s41598-020-62819-wopenalex-snapshot
Diversity and Multiplicity of P. falciparum infections among asymptomatic school children in Mbita, Western Kenya
inferred← citeshttps://doi.org/10.1101/2023.03.06.531320openalex-snapshot
Antigenic strain diversity predicts different biogeographic patterns of maintenance and decline of anti-malarial drug resistance
inferred← citeshttps://doi.org/10.1101/793554openalex-snapshot
Evaluating the performance of malaria genomics for inferring changes in transmission intensity using transmission modelling
inferred← citeshttps://doi.org/10.1186/s12936-019-2880-1openalex-snapshot
Applying next-generation sequencing to track falciparum malaria in sub-Saharan Africa
inferred← citeshttps://doi.org/10.1186/s13073-021-00889-9openalex-snapshot
Single-cell sequencing of the small and AT-skewed genome of malaria parasites
inferred← citeshttps://doi.org/10.1371/journal.pgen.1008453openalex-snapshot
Genetic mapping of fitness determinants across the malaria parasite Plasmodium falciparum life cycle
inferred← citeshttps://doi.org/10.1534/genetics.119.302120openalex-snapshot
Estimating Relatedness Between Malaria Parasites
inferred← citeshttps://doi.org/10.3390/biology11040587openalex-snapshot
Whole Genome Sequencing Contributions and Challenges in Disease Reduction Focused on Malaria
inferred← citeshttps://doi.org/10.7554/elife.90888openalex-snapshot
Antigenic strain diversity predicts different biogeographic patterns of maintenance and decline of antimalarial drug resistance
inferred← citeshttps://doi.org/10.7554/elife.90888.1openalex-snapshot
Antigenic strain diversity predicts different biogeographic patterns of invasion and maintenance of anti-malarial drug resistance
inferred← citeshttps://doi.org/10.7554/elife.90888.2openalex-snapshot
Antigenic strain diversity predicts different biogeographic patterns of maintenance and decline of anti-malarial drug resistance
inferred← citeshttps://doi.org/10.7554/elife.90888.3openalex-snapshot
Antigenic strain diversity predicts different biogeographic patterns of maintenance and decline of antimalarial drug resistance
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.