On the public citation graph

Differential gene expression indicates involvement of F-box proteins and E3 ligases in sexual versus apomictic germline specification in Boechera

https://doi.org/10.1101/403915
0 signed · 96 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/scdb.1997.0214openalex-snapshot
The molecular and genetic basis of ovule and megagametophyte development
inferredcites →https://doi.org/10.1007/978-3-7091-1526-8_9openalex-snapshot
Auxin Regulation of Embryo Development
inferredcites →https://doi.org/10.1007/s00497-001-0117-1openalex-snapshot
Apomixis in agriculture: the quest for clonal seeds
inferredcites →https://doi.org/10.1007/s00497-011-0161-4openalex-snapshot
Nuclear behavior, cell polarity, and cell specification in the female gametophyte
inferredcites →https://doi.org/10.1007/s00497-013-0218-7openalex-snapshot
On the origin and evolution of apomixis in Boechera
inferredcites →https://doi.org/10.1007/s00497-013-0222-yopenalex-snapshot
Apomixis in plant reproduction: a novel perspective on an old dilemma
inferredcites →https://doi.org/10.1016/j.cub.2004.09.020openalex-snapshot
APC/C and SCF: Controlling Each Other and the Cell Cycle
inferredcites →https://doi.org/10.1016/j.cub.2010.01.051openalex-snapshot
Arabidopsis Female Gametophyte Gene Expression Map Reveals Similarities between Plant and Animal Gametes
inferredcites →https://doi.org/10.1016/j.molp.2017.01.012openalex-snapshot
Germline Development and Fertilization Mechanisms in Maize
inferredcites →https://doi.org/10.1016/j.pbi.2006.09.003openalex-snapshot
F-box proteins everywhere
inferredcites →https://doi.org/10.1016/j.pbi.2017.11.002openalex-snapshot
Be my baby: patterning toward plant germ cells
inferredcites →https://doi.org/10.1016/j.ympev.2009.03.016openalex-snapshot
Phylogeographic structure of the chloroplast DNA gene pool in North American Boechera – A genus and continental-wide perspective
inferredcites →https://doi.org/10.1016/s0092-8674(00)80403-1openalex-snapshot
F-Box Proteins Are Receptors that Recruit Phosphorylated Substrates to the SCF Ubiquitin-Ligase Complex
inferredcites →https://doi.org/10.1016/s0168-9525(01)02454-4openalex-snapshot
Developmental genetics of gametophytic apomixis
inferredcites →https://doi.org/10.1016/s0959-437x(98)80059-2openalex-snapshot
Proteolysis and the G1-S transition: the SCF connection
inferredcites →https://doi.org/10.1016/s1097-2765(00)80334-2openalex-snapshot
The Structural Basis for the Recognition of Diverse Receptor Sequences by TRAF2
inferredcites →https://doi.org/10.1038/137671a0openalex-snapshot
Embryology of Angiosperms
inferredcites →https://doi.org/10.1038/nature06557openalex-snapshot
Gamete formation without meiosis in Arabidopsis
inferredcites →https://doi.org/10.1038/nature07289openalex-snapshot
Control of plant germline proliferation by SCFFBL17 degradation of cell cycle inhibitors
inferredcites →https://doi.org/10.1038/nature08828openalex-snapshot
Control of female gamete formation by a small RNA pathway in Arabidopsis
inferredcites →https://doi.org/10.1038/nature09128openalex-snapshot
Sphingosine-1-phosphate is a missing cofactor for the E3 ubiquitin ligase TRAF2
inferredcites →https://doi.org/10.1038/s41559-017-0119openalex-snapshot
Young inversion with multiple linked QTLs under selection in a hybrid zone
inferredcites →https://doi.org/10.1038/srep46043openalex-snapshot
Diplosporous development in Boehmeria tricuspis: Insights from de novo transcriptome assembly and comprehensive expression profiling
inferredcites →https://doi.org/10.1046/j.1365-2540.2001.00908.xopenalex-snapshot
Recurrent polyploid origins and chloroplast phylogeography in the Arabis holboellii complex (Brassicaceae)
inferredcites →https://doi.org/10.1046/j.1365-294x.2003.02064.xopenalex-snapshot
Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. × divaricarpa, and A. holboellii (Brassicaceae)
inferredcites →https://doi.org/10.1046/j.1365-313x.2001.00957.xopenalex-snapshot
DFL1, an auxin-responsive GH3 gene homologue, negatively regulates shoot cell elongation and lateral root formation, and positively regulates the light response of hypocotyl length
inferredcites →https://doi.org/10.1073/pnas.0706547105openalex-snapshot
Functional analysis of AHK1/ATHK1 and cytokinin receptor histidine kinases in response to abscisic acid, drought, and salt stress in Arabidopsis
inferredcites →https://doi.org/10.1073/pnas.1423447112openalex-snapshot
Hybrid apomicts trapped in the ecological niches of their sexual ancestors
inferredcites →https://doi.org/10.1073/pnas.1716054115openalex-snapshot
KLU suppresses megasporocyte cell fate through SWR1-mediated activation of WRKY28 expression in Arabidopsis
inferredcites →https://doi.org/10.1074/jbc.m207570200openalex-snapshot
Cell Cycle-regulated Gene Expression inArabidopsis
inferredcites →https://doi.org/10.1080/07352689.2015.1024566openalex-snapshot
Plant F-box Proteins – Judges between Life and Death
inferredcites →https://doi.org/10.1093/aob/mcy114openalex-snapshot
Establishing the cell biology of apomictic reproduction in diploid Boechera stricta (Brassicaceae)
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btp616openalex-snapshot
edgeR : a Bioconductor package for differential expression analysis of digital gene expression data
inferredcites →https://doi.org/10.1093/bioinformatics/bts356openalex-snapshot
RSeQC: quality control of RNA-seq experiments
inferredcites →https://doi.org/10.1093/bioinformatics/bts635openalex-snapshot
STAR: ultrafast universal RNA-seq aligner
inferredcites →https://doi.org/10.1093/bioinformatics/btt656openalex-snapshot
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
inferredcites →https://doi.org/10.1093/molbev/msg046openalex-snapshot
Multiple Hybrid Formation in Natural Populations: Concerted Evolution of the Internal Transcribed Spacer of Nuclear Ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae)
inferredcites →https://doi.org/10.1101/gr.124321.111openalex-snapshot
Differential expression in RNA-seq: A matter of depth
inferredcites →https://doi.org/10.1104/pp.008532openalex-snapshot
Transcriptome Changes for Arabidopsis in Response to Salt, Osmotic, and Cold Stress,
inferredcites →https://doi.org/10.1104/pp.104.052423openalex-snapshot
Functional Analysis of the RING-Type Ubiquitin Ligase Family of Arabidopsi s
inferredcites →https://doi.org/10.1104/pp.105.062059openalex-snapshot
SERK and APOSTART. Candidate Genes for Apomixis in Poa pratensis
inferredcites →https://doi.org/10.1104/pp.105.067983openalex-snapshot
Genome Analysis and Functional Characterization of the E2 and RING-Type E3 Ligase Ubiquitination Enzymes of Arabidopsis
inferredcites →https://doi.org/10.1104/pp.108.126375openalex-snapshot
Transcriptome Analyses Show Changes in Gene Expression to Accompany Pollen Germination and Tube Growth in Arabidopsis
inferredcites →https://doi.org/10.1104/pp.113.222430openalex-snapshot
A Conserved Apomixis-Specific Polymorphism Is Correlated with Exclusive Exonuclease Expression in Premeiotic Ovules of Apomictic Boechera Species
inferredcites →https://doi.org/10.1104/pp.17.00275openalex-snapshot
The TRAF Mediated Gametogenesis Progression (TRAMGaP) Gene Is Required for Megaspore Mother Cell Specification and Gametophyte Development
inferredcites →https://doi.org/10.1105/tpc.006791openalex-snapshot
Arabidopsis E2Fc Functions in Cell Division and Is Degraded by the Ubiquitin-SCF AtSKP2 Pathway in Response to Light
inferredcites →https://doi.org/10.1105/tpc.011742openalex-snapshot
Sexual and Apomictic Reproduction in Hieracium subgenus Pilosella Are Closely Interrelated Developmental Pathways
inferredcites →https://doi.org/10.1105/tpc.017921openalex-snapshot
Understanding Apomixis: Recent Advances and Remaining Conundrums
inferredcites →https://doi.org/10.1105/tpc.105.036731openalex-snapshot
Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASES1 and 2 Are Essential for Tapetum Development and Microspore Maturation
inferredcites →https://doi.org/10.1105/tpc.105.036814openalex-snapshot
The Arabidopsis thaliana SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASES1 and 2 Control Male Sporogenesis
inferredcites →https://doi.org/10.1105/tpc.105.039651openalex-snapshot
The Balance between Cell Division and Endoreplication Depends on E2FC-DPB, Transcription Factors Regulated by the Ubiquitin-SCFSKP2A Pathway inArabidopsis
inferredcites →https://doi.org/10.1105/tpc.109.072181openalex-snapshot
Inactivation of a DNA Methylation Pathway in Maize Reproductive Organs Results in Apomixis-Like Phenotypes
inferredcites →https://doi.org/10.1105/tpc.109.072223openalex-snapshot
Apomictic and Sexual Ovules ofBoecheraDisplay Heterochronic Global Gene Expression Patterns
inferredcites →https://doi.org/10.1105/tpc.110.079020openalex-snapshot
Production of Viable Gametes without Meiosis in Maize Deficient for an ARGONAUTE Protein
inferredcites →https://doi.org/10.1105/tpc.113.113860openalex-snapshot
Copy Number Variation in Transcriptionally Active Regions of Sexual and Apomictic Boechera Demonstrates Independently Derived Apomictic Lineages
inferredcites →https://doi.org/10.1105/tpc.114.133595openalex-snapshot
The Yin-Yang of Hormones: Cytokinin and Auxin Interactions in Plant Development
inferredcites →https://doi.org/10.1105/tpc.13.7.1491openalex-snapshot
How to Avoid Sex
inferredcites →https://doi.org/10.1105/tpc.5.10.1425openalex-snapshot
Apomixis: Embryo Sacs and Embryos Formed without Meiosis or Fertilization in Ovules
inferredcites →https://doi.org/10.1109/tcbb.2013.68openalex-snapshot
GenomeTools: A Comprehensive Software Library for Efficient Processing of Structured Genome Annotations
inferredcites →https://doi.org/10.1111/j.1095-8312.1997.tb01778.xopenalex-snapshot
Asynchronous expression of duplicate genes in angiosperms may cause apomixis, bispory, tetraspory, and polyembryony
inferredcites →https://doi.org/10.1111/j.1365-313x.2004.02302.xopenalex-snapshot
Molecular and functional characterization of Arabidopsis Cullin 3A
inferredcites →https://doi.org/10.1111/j.1365-313x.2005.02467.xopenalex-snapshot
Arabidopsis CUL3A and CUL3B genes are essential for normal embryogenesis
inferredcites →https://doi.org/10.1111/j.1365-313x.2007.03378.xopenalex-snapshot
SKP2A, an F‐box protein that regulates cell division, is degraded via the ubiquitin pathway
inferredcites →https://doi.org/10.1111/j.1365-313x.2009.03826.xopenalex-snapshot
Molecular signatures of apomictic and sexual ovules in the Boechera holboellii complex
inferredcites →https://doi.org/10.1111/j.1365-313x.2010.04188.xopenalex-snapshot
Identification and genetic analysis of the APOSPORY locus in Hypericum perforatum L.
inferredcites →https://doi.org/10.1111/j.1365-313x.2012.04897.xopenalex-snapshot
Analysis of plant germline development by high‐throughput RNA profiling: technical advances and new insights
inferredcites →https://doi.org/10.1111/j.1469-8137.2008.02514.xopenalex-snapshot
SPOROCYTELESS modulates YUCCA expression to regulate the development of lateral organs in Arabidopsis
inferredcites →https://doi.org/10.1111/pce.12142openalex-snapshot
The impact of environmental stress on male reproductive development in plants: biological processes and molecular mechanisms
inferredcites →https://doi.org/10.1111/pce.12662openalex-snapshot
Auxin response factors
inferredcites →https://doi.org/10.1126/science.1167324openalex-snapshot
Auxin-Dependent Patterning and Gamete Specification in the Arabidopsis Female Gametophyte
inferredcites →https://doi.org/10.1126/science.1220080openalex-snapshot
Hypoxia Triggers Meiotic Fate Acquisition in Maize
inferredcites →https://doi.org/10.1126/science.aaf6532openalex-snapshot
RETINOBLASTOMA RELATED1 mediates germline entry in Arabidopsis
inferredcites →https://doi.org/10.1146/annurev.arplant.54.110901.160842openalex-snapshot
Apomixis: A Developmental Perspective
inferredcites →https://doi.org/10.1186/1471-2164-9-488openalex-snapshot
BioVenn – a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams
inferredcites →https://doi.org/10.1186/gb-2010-11-3-r25openalex-snapshot
A scaling normalization method for differential expression analysis of RNA-seq data
inferredcites →https://doi.org/10.1186/s12859-016-1276-2openalex-snapshot
dupRadar: a Bioconductor package for the assessment of PCR artifacts in RNA-Seq data
inferredcites →https://doi.org/10.1242/dev.077891openalex-snapshot
Maize multiple archesporial cells 1 ( mac1 ), an ortholog of rice TDL1A , modulates cell proliferation and identity in early anther development
inferredcites →https://doi.org/10.1242/dev.098301openalex-snapshot
Theoretical and experimental evidence indicates that there is no detectable auxin gradient in the angiosperm female gametophyte
inferredcites →https://doi.org/10.1242/dev.102103openalex-snapshot
Plant germline formation: common concepts and developmental flexibility in sexual and asexual reproduction
inferredcites →https://doi.org/10.1371/journal.pbio.1000124openalex-snapshot
Turning Meiosis into Mitosis
inferredcites →https://doi.org/10.1371/journal.pbio.1001155openalex-snapshot
Transcriptome Analysis of the Arabidopsis Megaspore Mother Cell Uncovers the Importance of RNA Helicases for Plant Germline Development
inferredcites →https://doi.org/10.1371/journal.pgen.1004476openalex-snapshot
Apomictic and Sexual Germline Development Differ with Respect to Cell Cycle, Transcriptional, Hormonal and Epigenetic Regulation
inferredcites →https://doi.org/10.1371/journal.pgen.1006550openalex-snapshot
Mutation Accumulation in an Asexual Relative of Arabidopsis
inferredcites →https://doi.org/10.1371/journal.pgen.1007230openalex-snapshot
Arabidopsis ICK/KRP cyclin-dependent kinase inhibitors function to ensure the formation of one megaspore mother cell and one functional megaspore per ovule
inferredcites →https://doi.org/10.1371/journal.pone.0004780openalex-snapshot
The Arabidopsis thaliana F-Box Protein FBL17 Is Essential for Progression through the Second Mitosis during Pollen Development
inferredcites →https://doi.org/10.1371/journal.pone.0029685openalex-snapshot
A Powerful Method for Transcriptional Profiling of Specific Cell Types in Eukaryotes: Laser-Assisted Microdissection and RNA Sequencing
inferredcites →https://doi.org/10.1371/journal.pone.0036491openalex-snapshot
A Continental-Wide Perspective: The Genepool of Nuclear Encoded Ribosomal DNA and Single-Copy Gene Sequences in North American Boechera (Brassicaceae)
inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot
Cutadapt removes adapter sequences from high-throughput sequencing reads
inferredcites →https://doi.org/10.1517/14728222.7.3.411openalex-snapshot
TNF-receptor-associated factors as targets for drug development
inferredcites →https://doi.org/10.1534/genetics.114.163105openalex-snapshot
The Genetic Control of Apomixis: Asexual Seed Formation
inferredcites →https://doi.org/10.3100/1043-4534(2007)11[257:nansob]2.0.co;2openalex-snapshot
NEW AND NOTEWORTHY SPECIES OF BOECHERA (BRASSICACEAE) II: APOMICTIC HYBRIDS
inferredcites →https://doi.org/10.3732/ajb.1000188openalex-snapshot
Quantitative variation for apomictic reproduction in the genus Boechera (Brassicaceae)
inferredcites →https://doi.org/10.3732/ajb.91.12.2087openalex-snapshot
Intraspecific diversification in North American Boechera stricta (= Arabis drummondii), Boechera ×divaricarpa, and Boechera holboellii (Brassicaceae) inferred from nuclear and chloroplast molecular markers—an integrative approach
inferredcites →https://doi.org/10.3732/ajb.92.11.1797openalex-snapshot
Sexual reproduction, hybridization, apomixis, and polyploidization in the genus Boechera (Brassicaceae)
inferredcites →https://doi.org/10.3791/53916openalex-snapshot
Laser-assisted Microdissection (LAM) as a Tool for Transcriptional Profiling of Individual Cell Types
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.