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The interaction of phylogeny and community structure: linking clades’ ecological structures and trait evolution

https://doi.org/10.1101/404111
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Phylogenetic plant community structure along elevation is lineage specific
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The delayed rise of present-day mammals
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Exotic taxa less related to native species are more invasive
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Phylogenetic signal in plant pathogen–host range
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Comparative Methods as a Statistical Fix: The Dangers of Ignoring an Evolutionary Model
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A Novel Bayesian Method for Inferring and Interpreting the Dynamics of Adaptive Landscapes from Phylogenetic Comparative Data
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Phylogenetic eigenvector maps: a framework to model and predict species traits
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The ecology of differences: assessing community assembly with trait and evolutionary distances
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Phylogenetic relatedness and the determinants of competitive outcomes
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Predicting rates of interspecific interaction from phylogenetic trees
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TESTING FOR PHYLOGENETIC SIGNAL IN COMPARATIVE DATA: BEHAVIORAL TRAITS ARE MORE LABILE
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Emerging patterns in the comparative analysis of phylogenetic community structure
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Geographical variation in predictors of mammalian extinction risk: big is bad, but only in the tropics
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The merging of community ecology and phylogenetic biology
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Disentangling niche and neutral influences on community assembly: assessing the performance of community phylogenetic structure tests
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Phylogenetic diversity metrics for ecological communities: integrating species richness, abundance and evolutionary history
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Opposing effects of competitive exclusion on the phylogenetic structure of communities
inferredcites →https://doi.org/10.1111/j.1461-0248.2010.01515.xopenalex-snapshot
Niche conservatism as an emerging principle in ecology and conservation biology
inferredcites →https://doi.org/10.1111/j.1461-0248.2010.01523.xopenalex-snapshot
Metacommunity phylogenetics: separating the roles of environmental filters and historical biogeography
inferredcites →https://doi.org/10.1111/j.1461-0248.2012.01795.xopenalex-snapshot
Phylogenetic diversity and the functioning of ecosystems
inferredcites →https://doi.org/10.1111/j.1523-1739.2006.00555.xopenalex-snapshot
Incorporating Evolutionary Measures into Conservation Prioritization
inferredcites →https://doi.org/10.1111/j.1558-5646.2012.01619.xopenalex-snapshot
MODELING STABILIZING SELECTION: EXPANDING THE ORNSTEIN-UHLENBECK MODEL OF ADAPTIVE EVOLUTION
inferredcites →https://doi.org/10.1111/j.1600-0587.2012.00121.xopenalex-snapshot
The assembly of tropical tree communities – the advances and shortcomings of phylogenetic and functional trait analyses
inferredcites →https://doi.org/10.1111/j.1600-0706.2008.17053.xopenalex-snapshot
A consumer's guide to nestedness analysis
inferredcites →https://doi.org/10.1111/j.2041-210x.2011.00169.xopenalex-snapshot
phytools: an R package for phylogenetic comparative biology (and other things)
inferredcites →https://doi.org/10.1111/jvs.12345openalex-snapshot
Contrasting lineage‐specific patterns conceal community phylogenetic structure in larger clades
inferredcites →https://doi.org/10.1111/nyas.12157openalex-snapshot
An integrative view of phylogenetic comparative methods: connections to population genetics, community ecology, and paleobiology
inferredcites →https://doi.org/10.1126/science.1085510openalex-snapshot
Preserving the Tree of Life
inferredcites →https://doi.org/10.1146/annurev.ecolsys.31.1.343openalex-snapshot
Mechanisms of Maintenance of Species Diversity
inferredcites →https://doi.org/10.1146/annurev.ecolsys.33.010802.150448openalex-snapshot
Phylogenies and Community Ecology
inferredcites →https://doi.org/10.1371/journal.pone.0000296openalex-snapshot
Mammals on the EDGE: Conservation Priorities Based on Threat and Phylogeny
inferredcites →https://doi.org/10.1371/journal.pone.0089543openalex-snapshot
Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees
inferredcites →https://doi.org/10.1554/0014-3820(2003)057[0717:tfpsic]2.0.co;2openalex-snapshot
TESTING FOR PHYLOGENETIC SIGNAL IN COMPARATIVE DATA: BEHAVIORAL TRAITS ARE MORE LABILE
inferredcites →https://doi.org/10.1890/0012-9658(2000)081[2606:nmaosc]2.0.co;2openalex-snapshot
NULL MODEL ANALYSIS OF SPECIES CO-OCCURRENCE PATTERNS
inferredcites →https://doi.org/10.1890/0012-9658(2006)87[109:psofpc]2.0.co;2openalex-snapshot
PHYLOGENETIC STRUCTURE OF FLORIDIAN PLANT COMMUNITIES DEPENDS ON TAXONOMIC AND SPATIAL SCALE
inferredcites →https://doi.org/10.1890/0012-9658(2006)87[2418:tpapos]2.0.co;2openalex-snapshot
THE PROBLEM AND PROMISE OF SCALE DEPENDENCY IN COMMUNITY PHYLOGENETICS
inferredcites →https://doi.org/10.1890/0012-9658(2006)87[39:pathoo]2.0.co;2openalex-snapshot
PHYLOGENY AND THE HIERARCHICAL ORGANIZATION OF PLANT DIVERSITY
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NICHE EVOLUTION AND ADAPTIVE RADIATION: TESTING THE ORDER OF TRAIT DIVERGENCE
inferredcites →https://doi.org/10.1890/03-3179openalex-snapshot
BODY SIZE, ENERGY USE, AND COMMUNITY STRUCTURE OF SMALL MAMMALS
inferredcites →https://doi.org/10.1890/08-1494.1openalex-snapshot
PanTHERIA: a species‐level database of life history, ecology, and geography of extant and recently extinct mammals
inferredcites →https://doi.org/10.1890/09-1672.1openalex-snapshot
Functional trait and phylogenetic tests of community assembly across spatial scales in an Amazonian forest
inferredcites →https://doi.org/10.1890/10-1264.1openalex-snapshot
Generalized linear mixed models for phylogenetic analyses of community structure
inferredcites →https://doi.org/10.1890/11-0262.1openalex-snapshot
Species composition and abundance of mammalian communities
inferredcites →https://doi.org/10.1890/11-0493.1openalex-snapshot
Untangling the influence of ecological and evolutionary factors on trait variation across hummingbird assemblages
inferredcites →https://doi.org/10.1890/11-0494.1openalex-snapshot
Assessing the effects of spatial contingency and environmental filtering on metacommunity phylogenetics
inferredcites →https://doi.org/10.1890/12-1676.1openalex-snapshot
Barro Colorado Island's phylogenetic assemblage structure across fine spatial scales and among clades of different ages
inferredcites →https://doi.org/10.1890/15-0086.1openalex-snapshot
Improving phylogenetic regression under complex evolutionary models
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Suppdata: Downloading Supplementary Data from Published Manuscripts
inferredcites →https://doi.org/10.2307/177478openalex-snapshot
Null Model Analysis of Species Co-Occurrence Patterns
inferredcites →https://doi.org/10.2307/1938957openalex-snapshot
Body Size and Coexistnce in Desert Rodents: Chance or Community Structure?
inferredcites →https://doi.org/10.2307/3802723openalex-snapshot
Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach
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R: A Language and Environment for Statistical Computing
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