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System-wide identification and prioritization of enzyme substrates by thermal analysis (SIESTA)

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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A Microarray Strategy for Mapping the Substrate Specificity of Protein Tyrosine Phosphatase

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OPLS discriminant analysis: combining the strengths of PLS‐DA and SIMCA classification

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Variable influence on projection (VIP) for orthogonal projections to latent structures (OPLS)

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New use for CETSA: monitoring innate immune receptor stability via post-translational modification by OGT

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Current technologies to identify protein kinase substrates in high throughput

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Focus on mammalian thioredoxin reductases — Important selenoproteins with versatile functions

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A Systematic Screen for CDK4/6 Substrates Links FOXM1 Phosphorylation to Senescence Suppression in Cancer Cells

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Pervasive Protein Thermal Stability Variation during the Cell Cycle

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Modulation of Protein-Interaction States through the Cell Cycle

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Identifying Family-Member-Specific Targets of Mono-ARTDs by Using a Chemical Genetics Approach

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Characterization of human thioredoxin‐like‐1: Potential involvement in the cellular response against glucose deprivation

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Substrate-Induced Conformational Changes Occur in All Cleaved Forms of Caspase-6

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Substrate-Assisted Catalysis by PARP10 Limits Its Activity to Mono-ADP-Ribosylation

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Bcl3 Phosphorylation by Akt, Erk2, and IKK Is Required for Its Transcriptional Activity

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Monitoring structural modulation of redox-sensitive proteins in cells with MS-CETSA

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The thioredoxin and glutaredoxin systems are efficient electron donors to human plasma glutathione peroxidase.

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Structural Basis for Potency and Promiscuity in Poly(ADP-ribose) Polymerase (PARP) and Tankyrase Inhibitors

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Glycosylation May Reduce Protein Thermodynamic Stability by Inducing a Conformational Distortion

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Proteome Integral Solubility Alteration: A High-Throughput Proteomics Assay for Target Deconvolution

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Deamidation, but Not Truncation, Decreases the Urea Stability of a Lens Structural Protein, βB1-Crystallin

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Deamidation Alters the Structure and Decreases the Stability of Human Lens βΑ3-Crystallin

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Context-Dependent Effects of Asparagine Glycosylation on Pin WW Folding Kinetics and Thermodynamics

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Engineering the Substrate Specificity of ADP-Ribosyltransferases for Identifying Direct Protein Targets

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Targets of the cyclin-dependent kinase Cdk1

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MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

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ProteomeXchange provides globally coordinated proteomics data submission and dissemination

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Proteomic analysis of post-translational modifications

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The intrinsic and extrinsic effects of N-linked glycans on glycoproteostasis

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Proteome-wide identification of the endogenous ADP-ribosylome of mammalian cells and tissue

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Activation of diverse signalling pathways by oncogenic PIK3CA mutations

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Thermal proteome profiling monitors ligand interactions with cellular membrane proteins

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Thermal proteome profiling for unbiased identification of direct and indirect drug targets using multiplexed quantitative mass spectrometry

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Proteome-wide solubility and thermal stability profiling reveals distinct regulatory roles for ATP

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ProTargetMiner as a proteome signature library of anticancer molecules for functional discovery

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The functional landscape of the human phosphoproteome

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High throughput discovery of functional protein modifications by Hotspot Thermal Profiling

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Functional Identification of Target by Expression Proteomics (FITExP) reveals protein targets and highlights mechanisms of action of small molecule drugs

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Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins

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Physiological functions of thioredoxin and thioredoxin reductase

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Effect of glycosylation on protein folding: A close look at thermodynamic stabilization

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Thioredoxin-related protein of 14 kDa is an efficient L-cystine reductase and S-denitrosylase

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Endothelial Akt1 mediates angiogenesis by phosphorylating multiple angiogenic substrates

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Development of “substrate-trapping” mutants to identify physiological substrates of protein tyrosine phosphatases

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Identification and Characterization of a Dimerization Domain in CED-6, an Adapter Protein Involved in Engulfment of Apoptotic Cells

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Chaperone substrate provides missing link for cancer drug discovery

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Selenocysteine Insertion at a Predefined UAG Codon in a Release Factor 1 (RF1)-depleted Escherichia coli Host Strain Bypasses Species Barriers in Recombinant Selenoprotein Translation

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Post-translational Modification of Bone Morphogenetic Protein-1 Is Required for Secretion and Stability of the Protein

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High Throughput Identification of Potential Arabidopsis Mitogen-activated Protein Kinases Substrates

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Kinase-interacting substrate screening is a novel method to identify kinase substrates

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PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse

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The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible

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BRENDA in 2017: new perspectives and new tools in BRENDA

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Caspase‐dependent cleavage of the mono‐ ADP ‐ribosyltransferase ARTD 10 interferes with its pro‐apoptotic function

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ATM and ATR Substrate Analysis Reveals Extensive Protein Networks Responsive to DNA Damage

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Identification of SCF Ubiquitin Ligase Substrates by Global Protein Stability Profiling

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Protein Native-State Stabilization by Placing Aromatic Side Chains in N-Glycosylated Reverse Turns

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Monitoring Drug Target Engagement in Cells and Tissues Using the Cellular Thermal Shift Assay

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Tracking cancer drugs in living cells by thermal profiling of the proteome

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A systems-wide screen identifies substrates of the SCF βTrCP ubiquitin ligase

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Cell Signaling with Extracellular Thioredoxin and Thioredoxin‐Like Proteins: Insight into Their Mechanisms of Action

inferredcites →https://doi.org/10.1186/gb-2004-6-1-r2openalex-snapshot

Computational prediction of human metabolic pathways from the complete human genome

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Lysosomal Interaction of Akt with Phafin2: A Critical Step in the Induction of Autophagy

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Discovery and Interrogation of Functional Protein Modifications by Hotspot Thermal Profiling

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ARTD10/PARP10 Induces ADP-Ribosylation of GAPDH and Recruits GAPDH into Cytosolic Membrane-Free Cell Bodies When Overexpressed in Mammalian Cells

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Phosphoproteomics reveals that Parkinson's disease kinase LRRK2 regulates a subset of Rab GTPases

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Mass spectrometry-based Cellular Thermal Shift Assay (CETSA®) for target deconvolution in phenotypic drug discovery

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COVID-19: Nanomedicine Uncovers Blood-Clot Mystery

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A Bayesian semi-parametric model for thermal proteome profiling

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Mutant thermal proteome profiling for characterization of missense protein variants and their associated phenotypes within the proteome

inferred← citeshttps://doi.org/10.15252/msb.20199232openalex-snapshot

Thermal proteome profiling for interrogating protein interactions

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