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Panton-Valentine leucocidin is the key determinant of Staphylococcus aureus pyomyositis in a bacterial genome-wide association study

https://doi.org/10.1101/430538
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s11908-016-0520-2openalex-snapshot
Pyomyositis in Children
inferredcites →https://doi.org/10.1016/j.trstmh.2012.06.008openalex-snapshot
Pyomyositis in the upper Negro river basin, Brazilian Amazonia
inferredcites →https://doi.org/10.1016/s0022-2836(05)80360-2openalex-snapshot
Basic Local Alignment Search Tool
inferredcites →https://doi.org/10.1016/s0140-6736(06)68231-7openalex-snapshot
Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus
inferredcites →https://doi.org/10.1016/s1473-3099(12)70238-4openalex-snapshot
The role of the Panton-Valentine leucocidin toxin in staphylococcal disease: a systematic review and meta-analysis
inferredcites →https://doi.org/10.1038/ncomms12797openalex-snapshot
Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes
inferredcites →https://doi.org/10.1038/ng.2310openalex-snapshot
Genome-wide efficient mixed-model analysis for association studies
inferredcites →https://doi.org/10.1038/nm0211-169openalex-snapshot
A MRSA-terious enemy among us: End of the PVL controversy?
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.41openalex-snapshot
Identifying lineage effects when controlling for population structure improves power in bacterial association studies
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.59openalex-snapshot
Bacterial genomics: Microbial GWAS coming of age
inferredcites →https://doi.org/10.1038/nrg.2016.132openalex-snapshot
Microbial genome-wide association studies: lessons from human GWAS
inferredcites →https://doi.org/10.1073/pnas.1113219109openalex-snapshot
Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease
inferredcites →https://doi.org/10.1073/pnas.1305559110openalex-snapshot
Genome-wide association study identifies vitamin B 5 biosynthesis as a host specificity factor in Campylobacter
inferredcites →https://doi.org/10.1080/21645515.2016.1248326openalex-snapshot
Safety and immunogenicity of a recombinant Staphylococcus aureus α-toxoid and a recombinant Panton-Valentine leukocidin subunit, in healthy adults
inferredcites →https://doi.org/10.1086/507637openalex-snapshot
Infective Pyomyositis and Myositis in Children in the Era of Community‐Acquired, Methicillin‐ResistantStaphylococcus aureusInfection
inferredcites →https://doi.org/10.1086/604728openalex-snapshot
A Point Mutation in theagrLocus rather than Expression of the Panton‐Valentine Leukocidin Caused Previously Reported Phenotypes inStaphylococcus aureusPneumonia and Gene Regulation
inferredcites →https://doi.org/10.1093/bioinformatics/btt020openalex-snapshot
DSK: k -mer counting with very low memory usage
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1097/inf.0000000000000470openalex-snapshot
Increasing Pyomyositis Presentations Among Children in Queensland, Australia
inferredcites →https://doi.org/10.1101/gr.074492.107openalex-snapshot
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
inferredcites →https://doi.org/10.1101/gr.111120.110openalex-snapshot
Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads
inferredcites →https://doi.org/10.1101/gr.2289704openalex-snapshot
Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements
inferredcites →https://doi.org/10.1126/science.1137165openalex-snapshot
Staphylococcus aureus Panton-Valentine Leukocidin Causes Necrotizing Pneumonia
inferredcites →https://doi.org/10.1128/jcm.01917-10openalex-snapshot
Distinct Bacteriophages Encoding Panton-Valentine Leukocidin (PVL) among International Methicillin-Resistant Staphylococcus aureus Clones Harboring PVL
inferredcites →https://doi.org/10.1128/jcm.03117-13openalex-snapshot
Prediction of Staphylococcus aureus Antimicrobial Resistance by Whole-Genome Sequencing
inferredcites →https://doi.org/10.1136/pgmj.2003.009274openalex-snapshot
Tropical pyomyositis (myositis tropicans): current perspective
inferredcites →https://doi.org/10.1186/1471-2180-13-188openalex-snapshot
Variability of antibiotic susceptibility and toxin production of Staphylococcus aureus strains isolated from skin, soft tissue, and bone related infections
inferredcites →https://doi.org/10.1186/gb-2012-13-12-r118openalex-snapshot
Microevolutionary analysis of Clostridium difficile genomes to investigate transmission
inferredcites →https://doi.org/10.1214/aoms/1177706374openalex-snapshot
Estimation of the Medians for Dependent Variables
inferredcites →https://doi.org/10.1371/journal.pcbi.1004041openalex-snapshot
ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
inferredcites →https://doi.org/10.1371/journal.pcbi.1005595openalex-snapshot
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
inferredcites →https://doi.org/10.1371/journal.pgen.1004547openalex-snapshot
Comprehensive Identification of Single Nucleotide Polymorphisms Associated with Beta-lactam Resistance within Pneumococcal Mosaic Genes
inferredcites →https://doi.org/10.1371/journal.pone.0003198openalex-snapshot
Contribution of Panton-Valentine Leukocidin in Community-Associated Methicillin-Resistant Staphylococcus aureus Pathogenesis
inferredcites →https://doi.org/10.1371/journal.pone.0058155openalex-snapshot
Subpopulations of Staphylococcus aureus Clonal Complex 121 Are Associated with Distinct Clinical Entities
inferredcites →https://doi.org/10.1371/journal.pone.0061319openalex-snapshot
Within-Host Evolution of Staphylococcus aureus during Asymptomatic Carriage
inferredcites →https://doi.org/10.1371/journal.ppat.1000715openalex-snapshot
Staphylococcus aureus Panton-Valentine Leukocidin Is a Very Potent Cytotoxic Factor for Human Neutrophils
inferredcites →https://doi.org/10.1542/peds.2005-0566openalex-snapshot
Panton-Valentine Leukocidin Genes Are Associated With Enhanced Inflammatory Response and Local Disease in Acute Hematogenous Staphylococcus aureus Osteomyelitis in Children
inferredcites →https://doi.org/10.3201/eid0908.030089openalex-snapshot
Community-Acquired Methicillin-ResistantStaphylococcus aureusCarrying Panton-Valentine Leukocidin Genes: Worldwide Emergence
inferredcites →https://doi.org/10.3201/eid1901.120819openalex-snapshot
Staphylococcus aureusCausing Tropical Pyomyositis, Amazon Basin, Peru
inferredcites →https://doi.org/10.3389/fcimb.2012.00006openalex-snapshot
Staphylococcus aureus Temperate Bacteriophage: Carriage and Horizontal Gene Transfer is Lineage Associated
inferredcites →https://doi.org/10.4269/ajtmh.2011.10-0300openalex-snapshot
Emergence of Community-Associated Methicillin-Resistant Staphylococcus aureus Carriage in Children in Cambodia
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