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A new species in the Anopheles gambiae complex reveals new evolutionary relationships between vector and non-vector species

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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How reticulated are species?
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Polytene chromosome preparation from anopheline mosquitoes
inferredcites →https://doi.org/10.1007/978-94-015-8113-4openalex-snapshot
Mosquito Ecology
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Mosquito ecology: field sampling methods (2nd edn)
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Some distinctions between flavin-containing and cytochrome P450 monooxygenases
inferredcites →https://doi.org/10.1016/j.pt.2009.12.001openalex-snapshot
Evolutionary forces on Anopheles: what makes a malaria vector?
inferredcites →https://doi.org/10.1016/j.tig.2012.03.009openalex-snapshot
The genomics of speciation-with-gene-flow
inferredcites →https://doi.org/10.1016/j.ydbio.2009.02.038openalex-snapshot
Developmental and evolutionary basis for drought tolerance of the Anopheles gambiae embryo
inferredcites →https://doi.org/10.1016/s0035-9203(98)90761-1openalex-snapshot
The Anopheles gambiae complex: a new species from Ethiopia
inferredcites →https://doi.org/10.1016/s0169-5347(01)02187-5openalex-snapshot
Chromosomal rearrangements and speciation
inferredcites →https://doi.org/10.1038/196907a0openalex-snapshot
Anopheles gambiae Complex
inferredcites →https://doi.org/10.1038/hdy.2015.39openalex-snapshot
Genome-wide QTL mapping of saltwater tolerance in sibling species of Anopheles (malaria vector) mosquitoes
inferredcites →https://doi.org/10.1038/nature13408openalex-snapshot
Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA
inferredcites →https://doi.org/10.1038/nature15535openalex-snapshot
The effect of malaria control on Plasmodium falciparum in Africa between 2000 and 2015
inferredcites →https://doi.org/10.1038/nature24995openalex-snapshot
Genetic diversity of the African malaria vector Anopheles gambiae
inferredcites →https://doi.org/10.1046/j.1365-2583.2000.00178.xopenalex-snapshot
Evidence for mitochondrial introgression between Anopheles bwambae and Anopheles gambiae
inferredcites →https://doi.org/10.1046/j.1365-2583.2000.00206.xopenalex-snapshot
The kdr mutation occurs in the Mopti form of Anopheles gambiae s .s. through introgression
inferredcites →https://doi.org/10.1046/j.1365-2915.1998.00073.xopenalex-snapshot
Differential responses of mosquito sibling species Anopheles arabiensis and An. quadriannulatus to carbon dioxide, a man or a calf
inferredcites →https://doi.org/10.1046/j.1365-2915.2002.00393.xopenalex-snapshot
Simultaneous identification of species and molecular forms of the Anopheles gambiae complex by PCR‐RFLP
inferredcites →https://doi.org/10.1073/pnas.1013648108openalex-snapshot
Adaptive divergence between incipient species of Anopheles gambiae increases resistance to Plasmodium
inferredcites →https://doi.org/10.1073/pnas.1302562110openalex-snapshot
Blood meal-induced changes to antennal transcriptome profiles reveal shifts in odor sensitivities in Anopheles gambiae
inferredcites →https://doi.org/10.1073/pnas.1418892112openalex-snapshot
Adaptive introgression in an African malaria mosquito coincident with the increased usage of insecticide-treated bed nets
inferredcites →https://doi.org/10.1073/pnas.1434337100openalex-snapshot
Semipermeable species boundaries between Anopheles gambiae and Anopheles arabiensis : Evidence from multilocus DNA sequence variation
inferredcites →https://doi.org/10.1073/pnas.1603008113openalex-snapshot
Ape malaria transmission and potential for ape-to-human transfers in Africa
inferredcites →https://doi.org/10.1073/pnas.221274498openalex-snapshot
Chromosomal inversions and the reproductive isolation of species
inferredcites →https://doi.org/10.1080/10635150600755453openalex-snapshot
Approximate Likelihood-Ratio Test for Branches: A Fast, Accurate, and Powerful Alternative
inferredcites →https://doi.org/10.1093/aesa/87.6.651openalex-snapshot
Evolution, Weighting, and Phylogenetic Utility of Mitochondrial Gene Sequences and a Compilation of Conserved Polymerase Chain Reaction Primers
inferredcites →https://doi.org/10.1093/bioinformatics/btg412openalex-snapshot
APE: Analyses of Phylogenetics and Evolution in R language
inferredcites →https://doi.org/10.1093/bioinformatics/btl529openalex-snapshot
Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot
Fast and accurate short read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/bioinformatics/bts199openalex-snapshot
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
inferredcites →https://doi.org/10.1093/bioinformatics/bts578openalex-snapshot
Adding unaligned sequences into an existing alignment using MAFFT and LAST
inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
inferredcites →https://doi.org/10.1093/bioinformatics/btv351openalex-snapshot
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
inferredcites →https://doi.org/10.1093/bioinformatics/btw378openalex-snapshot
PEP_scaffolder: using (homologous) proteins to scaffold genomes
inferredcites →https://doi.org/10.1093/genetics/147.4.1817openalex-snapshot
Patterns of Mitochondrial Variation Within and Between African Malaria Vectors, Anopheles gambiae and An. arabiensis, Suggest Extensive Gene Flow
inferredcites →https://doi.org/10.1093/molbev/msg236openalex-snapshot
Temporal Patterns of Fruit Fly (Drosophila) Evolution Revealed by Mutation Clocks
inferredcites →https://doi.org/10.1093/molbev/msx149openalex-snapshot
SMS: Smart Model Selection in PhyML
inferredcites →https://doi.org/10.1093/nar/gki198openalex-snapshot
MAFFT version 5: improvement in accuracy of multiple sequence alignment
inferredcites →https://doi.org/10.1093/nar/gkn923openalex-snapshot
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
inferredcites →https://doi.org/10.1093/sysbio/syq010openalex-snapshot
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
inferredcites →https://doi.org/10.1098/rstb.2012.0304openalex-snapshot
Climatic and cultural changes in the west Congo Basin forests over the past 5000 years
inferredcites →https://doi.org/10.1101/gr.107524.110openalex-snapshot
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
inferredcites →https://doi.org/10.1101/gr.170720.113openalex-snapshot
Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads
inferredcites →https://doi.org/10.1101/gr.229202openalex-snapshot
BLAT —The BLAST -Like Alignment Tool
inferredcites →https://doi.org/10.1111/eva.12517openalex-snapshot
Dissecting functional components of reproductive isolation among closely related sympatric species of theAnopheles gambiaecomplex
inferredcites →https://doi.org/10.1111/evo.12075openalex-snapshot
THE GENETIC ARCHITECTURE OF REPRODUCTIVE ISOLATION DURING SPECIATION-WITH-GENE-FLOW IN LAKE WHITEFISH SPECIES PAIRS ASSESSED BY RAD SEQUENCING
inferredcites →https://doi.org/10.1111/evo.13176openalex-snapshot
Chromosome inversions and ecological plasticity in the main African malaria mosquitoes
inferredcites →https://doi.org/10.1111/j.1365-2915.2007.00681.xopenalex-snapshot
Molecular differentiation of three closely related members of the mosquito species complex, Anopheles moucheti , by mitochondrial and ribosomal DNA polymorphism
inferredcites →https://doi.org/10.1111/j.1365-3113.1985.tb00155.xopenalex-snapshot
Anopheles bwambae sp.n., a malaria vector in the Semliki Valley, Uganda, and its relationships with other sibling species of the A n.gambiae complex (Diptera: Culicidae)
inferredcites →https://doi.org/10.1111/j.1558-5646.2012.01836.xopenalex-snapshot
REPRODUCTIVE ISOLATION AND LOCAL ADAPTATION QUANTIFIED FOR A CHROMOSOME INVERSION IN A MALARIA MOSQUITO
inferredcites →https://doi.org/10.1111/mec.12796openalex-snapshot
Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
inferredcites →https://doi.org/10.1111/mec.13074openalex-snapshot
Chromosome inversions, adaptive cassettes and the evolution of species' ranges
inferredcites →https://doi.org/10.1126/scienceopenalex-snapshot
Science
inferredcites →https://doi.org/10.1126/science.1077769openalex-snapshot
A Polytene Chromosome Analysis of the Anopheles gambiae Species Complex
inferredcites →https://doi.org/10.1126/science.1140516openalex-snapshot
Signals from chloroplasts converge to regulate nuclear gene expression.
inferredcites →https://doi.org/10.1126/science.1193036openalex-snapshot
SNP Genotyping Defines Complex Gene-Flow Boundaries Among African Malaria Vector Mosquitoes
inferredcites →https://doi.org/10.1126/science.1258522openalex-snapshot
Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes
inferredcites →https://doi.org/10.1126/science.1258524openalex-snapshot
Extensive introgression in a malaria vector species complex revealed by phylogenomics
inferredcites →https://doi.org/10.1146/annurev-ento-010814-020828openalex-snapshot
Insecticide Resistance in Mosquitoes: Impact, Mechanisms, and Research Directions
inferredcites →https://doi.org/10.11646/zootaxa.3619.3.2openalex-snapshot
Anopheles coluzzii and Anopheles amharicus, new members of the Anopheles gambiae complex
inferredcites →https://doi.org/10.1186/1471-2105-15-182openalex-snapshot
Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads
inferredcites →https://doi.org/10.1186/1471-2148-8-309openalex-snapshot
Chromosomal plasticity and evolutionary potential in the malaria vector Anopheles gambiae sensu stricto: insights from three decades of rare paracentric inversions
inferredcites →https://doi.org/10.1186/1475-2875-9-321openalex-snapshot
Malaria transmission and insecticide resistance of Anopheles gambiae in Libreville and Port-Gentil, Gabon
inferredcites →https://doi.org/10.1186/1756-3305-3-117openalex-snapshot
The dominant Anopheles vectors of human malaria in Africa, Europe and the Middle East: occurrence data, distribution maps and bionomic précis
inferredcites →https://doi.org/10.1186/1756-3305-5-69openalex-snapshot
A global map of dominant malaria vectors
inferredcites →https://doi.org/10.1186/2047-217x-1-18openalex-snapshot
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
inferredcites →https://doi.org/10.1186/gb-2014-15-3-r46openalex-snapshot
Kraken: ultrafast metagenomic sequence classification using exact alignments
inferredcites →https://doi.org/10.1186/s12936-015-0674-7openalex-snapshot
Evaluation of a protocol for remote identification of mosquito vector species reveals BG-Sentinel trap as an efficient tool for Anopheles gambiae outdoor collection in Burkina Faso
inferredcites →https://doi.org/10.1191/0959683605hl875raopenalex-snapshot
Vegetation changes during the past 1300 years in western equatorial Afnrca: a highresolution pollen record from Lake Kamalee, Lope Reserve, Central Gabon
inferredcites →https://doi.org/10.1196/annals.1391.018openalex-snapshot
New Tricks for an Old Dog
inferredcites →https://doi.org/10.1371/journal.pbio.1000500openalex-snapshot
A Widespread Chromosomal Inversion Polymorphism Contributes to a Major Life-History Transition, Local Adaptation, and Reproductive Isolation
inferredcites →https://doi.org/10.1371/journal.pone.0034841openalex-snapshot
Adaptation to Aridity in the Malaria Mosquito Anopheles gambiae: Chromosomal Inversion Polymorphism and Body Size Influence Resistance to Desiccation
inferredcites →https://doi.org/10.1379/1466-1268(1996)001<0023:ahsgtt>2.3.co;2openalex-snapshot
A hitchhiker's guide to the human Hsp70 family
inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot
Cutadapt removes adapter sequences from high-throughput sequencing reads
inferredcites →https://doi.org/10.3389/fgene.2014.00129openalex-snapshot
Adaptation through chromosomal inversions in Anopheles
inferredcites →https://doi.org/10.4269/ajtmh.2007.76.334openalex-snapshot
MOLECULAR KARYOTYPING OF THE 2LA INVERSION IN ANOPHELES GAMBIAE
inferredcites →https://doi.org/10.6084/m9.figshare.963153.v1openalex-snapshot
Aligning sequence reads, clone sequences and assembly con*gs with BWA-MEM

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/978-3-030-64548-9_3openalex-snapshot
Speciation Processes in Triatominae
inferred← citeshttps://doi.org/10.1007/s42690-020-00390-7openalex-snapshot
Larvicidal, oviposition-deterrence, and excito-repellency activities of four essential oils: an eco-friendly tool against malaria vectors Anopheles coluzzii and Anopheles gambiae (Diptera: Culicidae)
inferred← citeshttps://doi.org/10.1098/rspb.2019.1080openalex-snapshot
Premeiotic and meiotic failures lead to hybrid male sterility in the Anopheles gambiae complex
inferred← citeshttps://doi.org/10.1101/507889openalex-snapshot
Premeiotic and meiotic failures lead to hybrid male sterility in the Anopheles gambiae complex
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