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Fast, multicolor 3-D imaging of brain organoids with a new single-objective two-photon virtual light-sheet microscope

https://doi.org/10.1101/461335
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/jemt.22981openalex-snapshot
Technical implementations of light sheet microscopy
inferredcites →https://doi.org/10.1007/978-1-4615-7133-9_10openalex-snapshot
Intermediate Optics in Nipkow Disk Microscopes
inferredcites →https://doi.org/10.1007/978-1-4757-5348-6_10openalex-snapshot
Intermediate Optics in Nipkow Disk Microscopes
inferredcites →https://doi.org/10.1007/s00418-014-1215-0openalex-snapshot
A fast, low cost, and highly efficient fluorescent DNA labeling method using methyl green
inferredcites →https://doi.org/10.1007/s004180100254openalex-snapshot
TO-PRO-3 is an optimal fluorescent dye for nuclear counterstaining in dual-colour FISH on paraffin sections
inferredcites →https://doi.org/10.1007/s00429-018-1678-1openalex-snapshot
Two-photon probes for in vivo multicolor microscopy of the structure and signals of brain cells
inferredcites →https://doi.org/10.1016/j.ceb.2017.01.001openalex-snapshot
Probing human brain evolution and development in organoids
inferredcites →https://doi.org/10.1016/j.cell.2015.06.067openalex-snapshot
Clarifying Tissue Clearing
inferredcites →https://doi.org/10.1016/j.neuron.2008.01.011openalex-snapshot
Fast Three-Dimensional Fluorescence Imaging of Activity in Neural Populations by Objective-Coupled Planar Illumination Microscopy
inferredcites →https://doi.org/10.1016/j.ydbio.2016.06.037openalex-snapshot
Dishing out mini-brains: Current progress and future prospects in brain organoid research
inferredcites →https://doi.org/10.1016/s0076-6879(03)65023-8openalex-snapshot
Defined Conditions for Neural Commitment and Differentiation
inferredcites →https://doi.org/10.1016/s0165-0270(01)00438-1openalex-snapshot
Two-photon microscopy in brain tissue: parameters influencing the imaging depth
inferredcites →https://doi.org/10.1038/d41586-018-04813-xopenalex-snapshot
The ethics of experimenting with human brain tissue
inferredcites →https://doi.org/10.1038/nature12517openalex-snapshot
Cerebral organoids model human brain development and microcephaly
inferredcites →https://doi.org/10.1038/nbt.4127openalex-snapshot
An in vivo model of functional and vascularized human brain organoids
inferredcites →https://doi.org/10.1038/ncb3312openalex-snapshot
Organoids as an in vitro model of human development and disease
inferredcites →https://doi.org/10.1038/nmeth.1652openalex-snapshot
Deep and fast live imaging with two-photon scanned light-sheet microscopy
inferredcites →https://doi.org/10.1038/nmeth.2019openalex-snapshot
Fiji: an open-source platform for biological-image analysis
inferredcites →https://doi.org/10.1038/nmeth.2922openalex-snapshot
Light-sheet microscopy using an Airy beam
inferredcites →https://doi.org/10.1038/nmeth.2963openalex-snapshot
Multicolor two-photon light-sheet microscopy
inferredcites →https://doi.org/10.1038/nmeth.3219openalex-snapshot
Light-sheet fluorescence microscopy for quantitative biology
inferredcites →https://doi.org/10.1038/nmeth.3222openalex-snapshot
Guide to light-sheet microscopy for adventurous biologists
inferredcites →https://doi.org/10.1038/nn.4107openalex-snapshot
ScaleS: an optical clearing palette for biological imaging
inferredcites →https://doi.org/10.1038/nprot.2014.158openalex-snapshot
Generation of cerebral organoids from human pluripotent stem cells
inferredcites →https://doi.org/10.1038/s41598-018-20306-3openalex-snapshot
RTF: a rapid and versatile tissue optical clearing method
inferredcites →https://doi.org/10.1038/srep44939openalex-snapshot
Imaging tissue-mimic with light sheet microscopy: A comparative guideline
inferredcites →https://doi.org/10.1046/j.1365-2818.2002.01001.xopenalex-snapshot
Comparison of the axial resolution of practical Nipkow‐disk confocal fluorescence microscopy with that of multifocal multiphoton microscopy: theory and experiment
inferredcites →https://doi.org/10.1073/pnas.1216696110openalex-snapshot
Improving spinning disk confocal microscopy by preventing pinhole cross-talk for intravital imaging
inferredcites →https://doi.org/10.1073/pnas.1303732110openalex-snapshot
Correction for Centrone et al., The role of nanostructure in the wetting behavior of mixed-monolayer-protected metal nanoparticles
inferredcites →https://doi.org/10.1101/321091openalex-snapshot
Two-photon imaging induces brain heating and calcium microdomain hyperactivity in cortical astrocytes
inferredcites →https://doi.org/10.1117/1.nph.5.3.035007openalex-snapshot
Evaluation of seven optical clearing methods in mouse brain
inferredcites →https://doi.org/10.1126/science.1100035openalex-snapshot
Optical Sectioning Deep Inside Live Embryos by Selective Plane Illumination Microscopy
inferredcites →https://doi.org/10.1126/science.1162493openalex-snapshot
Reconstruction of Zebrafish Early Embryonic Development by Scanned Light Sheet Microscopy
inferredcites →https://doi.org/10.1126/science.1257998openalex-snapshot
Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution
inferredcites →https://doi.org/10.1242/dev.091844openalex-snapshot
ClearT: a detergent- and solvent-free clearing method for neuronal and non-neuronal tissue
inferredcites →https://doi.org/10.1364/boe.5.001296openalex-snapshot
Cellular imaging of deep organ using two-photon Bessel light-sheet nonlinear structured illumination microscopy
inferredcites →https://doi.org/10.1364/oe.20.021805openalex-snapshot
Scanned light sheet microscopy with confocal slit detection
inferredcites →https://doi.org/10.1364/oe.21.013824openalex-snapshot
Light-sheet microscopy in thick media using scanned Bessel beams and two-photon fluorescence excitation
inferredcites →https://doi.org/10.1364/oe.23.016142openalex-snapshot
Open-top selective plane illumination microscope for conventionally mounted specimens
inferredcites →https://doi.org/10.1364/ol.23.000655openalex-snapshot
Multifocal multiphoton microscopy
inferredcites →https://doi.org/10.1369/0022155410394857openalex-snapshot
Light Sheet Fluorescence Microscopy
inferredcites →https://doi.org/10.1371/journal.pone.0116280openalex-snapshot
A Rapid Optical Clearing Protocol Using 2,2′-Thiodiethanol for Microscopic Observation of Fixed Mouse Brain
inferredcites →https://doi.org/10.1515/9783110429985openalex-snapshot
Multiphoton Microscopy and Fluorescence Lifetime Imaging
inferredcites →https://doi.org/10.15252/embj.201694700openalex-snapshot
Self‐organized developmental patterning and differentiation in cerebral organoids
inferredcites →https://doi.org/10.3389/fcell.2017.00117openalex-snapshot
The Importance of Non-neuronal Cell Types in hiPSC-Based Disease Modeling and Drug Screening
inferredcites →https://doi.org/10.3389/fncel.2018.00315openalex-snapshot
Bessel Beam Illumination Reduces Random and Systematic Errors in Quantitative Functional Studies Using Light-Sheet Microscopy

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1038/s41598-024-72038-2openalex-snapshot
Non-invasive label-free imaging analysis pipeline for in situ characterization of 3D brain organoids
inferred← citeshttps://doi.org/10.1117/12.2650755openalex-snapshot
Tracking early tuberous sclerosis complex diseased organoid development with quantitative oblique back-illumination microscopy
inferred← citeshttps://doi.org/10.70675/9a1b8c41z6848z4027z8147z9a06bd02ce6eopenalex-snapshot
Stratégies avancées d'imagerie multiphoton pour l'étude de processus périodiques rapides in vivo : des cils motiles au cœur battant
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