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Phase separation and nucleosome compaction are governed by the same domain of Polycomb Repressive Complex 1

https://doi.org/10.1101/467316
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/0471142727.mb1201s75openalex-snapshot
Preparation of Nuclear and Cytoplasmic Extracts from Mammalian Cells
inferredcites →https://doi.org/10.1002/0471142727.mb2105s50openalex-snapshot
Isolation of Histones and Nucleosome Cores from Mammalian Cells
inferredcites →https://doi.org/10.1002/0471142727.mb2106s54openalex-snapshot
Assembly of Nucleosomal Templates by Salt Dialysis
inferredcites →https://doi.org/10.1002/jms.229openalex-snapshot
Proteomics: the move to mixtures
inferredcites →https://doi.org/10.1016/1044-0305(94)80016-2openalex-snapshot
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
inferredcites →https://doi.org/10.1016/j.cell.2006.12.041openalex-snapshot
The Site-Specific Installation of Methyl-Lysine Analogs into Recombinant Histones
inferredcites →https://doi.org/10.1016/j.cell.2013.10.033openalex-snapshot
Phosphorylation-Regulated Binding of RNA Polymerase II to Fibrous Polymers of Low-Complexity Domains
inferredcites →https://doi.org/10.1016/j.cell.2018.06.006openalex-snapshot
A Molecular Grammar Governing the Driving Forces for Phase Separation of Prion-like RNA Binding Proteins
inferredcites →https://doi.org/10.1016/j.celrep.2013.11.017openalex-snapshot
RNA Seeds Higher-Order Assembly of FUS Protein
inferredcites →https://doi.org/10.1016/j.devcel.2013.08.016openalex-snapshot
SAM Domain Polymerization Links Subnuclear Clustering of PRC1 to Gene Silencing
inferredcites →https://doi.org/10.1016/j.molcel.2008.10.016openalex-snapshot
EZH1 Mediates Methylation on Histone H3 Lysine 27 and Complements EZH2 in Maintaining Stem Cell Identity and Executing Pluripotency
inferredcites →https://doi.org/10.1016/j.molcel.2015.02.013openalex-snapshot
Cbx2 Targets PRC1 to Constitutive Heterochromatin in Mouse Zygotes in a Parent-of-Origin-Dependent Manner
inferredcites →https://doi.org/10.1016/j.molcel.2017.01.009openalex-snapshot
Polycomb Repressive Complex 1 Generates Discrete Compacted Domains that Change during Differentiation
inferredcites →https://doi.org/10.1016/s0168-9525(00)02024-2openalex-snapshot
EMBOSS: The European Molecular Biology Open Software Suite
inferredcites →https://doi.org/10.1021/ac950914hopenalex-snapshot
Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels
inferredcites →https://doi.org/10.1038/28886openalex-snapshot
Transcriptional activators direct histone acetyltransferase complexes to nucleosomes
inferredcites →https://doi.org/10.1038/nature22822openalex-snapshot
Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin
inferredcites →https://doi.org/10.1038/nature22989openalex-snapshot
Phase separation drives heterochromatin domain formation
inferredcites →https://doi.org/10.1038/nbt1240openalex-snapshot
A probability-based approach for high-throughput protein phosphorylation analysis and site localization
inferredcites →https://doi.org/10.1038/ncomms10291openalex-snapshot
Chromatin topology is coupled to Polycomb group protein subnuclear organization
inferredcites →https://doi.org/10.1038/nsmb.2669openalex-snapshot
Transcriptional regulation by Polycomb group proteins
inferredcites →https://doi.org/10.1038/s41586-018-0174-3openalex-snapshot
Phase-separation mechanism for C-terminal hyperphosphorylation of RNA polymerase II
inferredcites →https://doi.org/10.1038/s41594-018-0112-yopenalex-snapshot
RNA polymerase II clustering through carboxy-terminal domain phase separation
inferredcites →https://doi.org/10.1074/jbc.m116.730853openalex-snapshot
CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development
inferredcites →https://doi.org/10.1083/jcb.142.4.887openalex-snapshot
The Human Polycomb Group Complex Associates with Pericentromeric Heterochromatin to Form a Novel Nuclear Domain
inferredcites →https://doi.org/10.1083/jcb.201308087openalex-snapshot
Phase transitions and size scaling of membrane-less organelles
inferredcites →https://doi.org/10.1091/mbc.e14-06-1109openalex-snapshot
Cbx2 stably associates with mitotic chromosomes via a PRC2- or PRC1-independent mechanism and is needed for recruiting PRC1 complex to mitotic chromosomes
inferredcites →https://doi.org/10.1093/jb/mvx040openalex-snapshot
Phosphorylation of CBX2 controls its nucleosome-binding specificity
inferredcites →https://doi.org/10.1101/gad.17288211openalex-snapshot
Compaction of chromatin by diverse Polycomb group proteins requires localized regions of high charge
inferredcites →https://doi.org/10.1126/science.1068539openalex-snapshot
Partitioning of Lipid-Modified Monomeric GFPs into Membrane Microdomains of Live Cells
inferredcites →https://doi.org/10.1126/science.aaf4382openalex-snapshot
Liquid phase condensation in cell physiology and disease
inferredcites →https://doi.org/10.1126/science.aah5403openalex-snapshot
Mutation of a nucleosome compaction region disrupts Polycomb-mediated axial patterning
inferredcites →https://doi.org/10.1126/science.aar2555openalex-snapshot
Imaging dynamic and selective low-complexity domain interactions that control gene transcription
inferredcites →https://doi.org/10.1126/science.aar3958openalex-snapshot
Coactivator condensation at super-enhancers links phase separation and gene control
inferredcites →https://doi.org/10.1126/science.aar4199openalex-snapshot
Mediator and RNA polymerase II clusters associate in transcription-dependent condensates
inferredcites →https://doi.org/10.1128/mcb.17.7.4105openalex-snapshot
RING1 Is Associated with the Polycomb Group Protein Complex and Acts as a Transcriptional Repressor
inferredcites →https://doi.org/10.1128/mcb.26.7.2560-2569.2006openalex-snapshot
Mouse Polycomb Proteins Bind Differentially to Methylated Histone H3 and RNA and Are Enriched in Facultative Heterochromatin
inferredcites →https://doi.org/10.1146/annurev-cellbio-100913-013325openalex-snapshot
Liquid-Liquid Phase Separation in Biology
inferredcites →https://doi.org/10.1186/1471-2105-7-208openalex-snapshot
Length-dependent prediction of protein intrinsic disorder
inferredcites →https://doi.org/10.15252/embj.201696394openalex-snapshot
Phosphorylation of the FUS low‐complexity domain disrupts phase separation, aggregation, and toxicity

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s12038-019-9968-1openalex-snapshot
Recent advances in the spatial organization of the mammalian genome
inferred← citeshttps://doi.org/10.1016/j.celrep.2021.108888openalex-snapshot
Tunable, division-independent control of gene activation timing by a polycomb switch
inferred← citeshttps://doi.org/10.1016/j.tibs.2019.04.005openalex-snapshot
Emerging Roles for Polycomb-Group Proteins in Stem Cells and Cancer
inferred← citeshttps://doi.org/10.1038/s41467-019-10755-3openalex-snapshot
PRC1 collaborates with SMCHD1 to fold the X-chromosome and spread Xist RNA between chromosome compartments
inferred← citeshttps://doi.org/10.1038/s41588-021-00888-xopenalex-snapshot
Orphan CpG islands amplify poised enhancer regulatory activity and determine target gene responsiveness
inferred← citeshttps://doi.org/10.1093/bfgp/elz022openalex-snapshot
Polycomb proteins as organizers of 3D genome architecture in embryonic stem cells
inferred← citeshttps://doi.org/10.1101/593970openalex-snapshot
Cohesin disrupts polycomb-dependent chromosome interactions
inferred← citeshttps://doi.org/10.1101/752170openalex-snapshot
Temporal scaling in developmental gene networks by epigenetic timing control
inferred← citeshttps://doi.org/10.1103/physreve.100.060401openalex-snapshot
Chromatin state switching in a polymer model with mark-conformation coupling
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