On the public citation graph

Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems: Biocoenosis of Botryococcus consortia

0 signed · 76 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/bit.260490302openalex-snapshot

A versatile oxygenator and perfusion system for magnetic resonance studies

inferredcites →https://doi.org/10.1002/mbo3.482openalex-snapshot

Metagenomic analysis of the complex microbial consortium associated with cultures of the oil‐rich alga Botryococcus braunii

inferredcites →https://doi.org/10.1007/978-3-540-77587-4openalex-snapshot

Handbook of Hydrocarbon and Lipid Microbiology

inferredcites →https://doi.org/10.1007/978-3-540-77587-4_59openalex-snapshot

Enzymes for Aerobic Degradation of Alkanes

inferredcites →https://doi.org/10.1007/bf00422356openalex-snapshot

Ein Submersverfahren zur Kultur wasserstoffoxydierender Bakterien: Wachstumsphysiologische Untersuchungen

inferredcites →https://doi.org/10.1007/bf00446654openalex-snapshot

The cell content and secretion of water-soluble vitamins by several freshwater algae

inferredcites →https://doi.org/10.1007/s10811-014-0458-4openalex-snapshot

Dependency of the fatty acid composition of Euglena gracilis on growth phase and culture conditions

inferredcites →https://doi.org/10.1016/j.biocontrol.2009.10.004openalex-snapshot

Lysis of a red-tide causing alga, Alexandrium tamarense, caused by bacteria from its phycosphere

inferredcites →https://doi.org/10.1016/j.biortech.2012.01.080openalex-snapshot

Anaerobic co-digestion of pig manure and crude glycerol at mesophilic conditions: Biogas and digestate

inferredcites →https://doi.org/10.1016/j.biotechadv.2015.12.003openalex-snapshot

Algae–bacteria interactions: Evolution, ecology and emerging applications

inferredcites →https://doi.org/10.1016/j.cell.2018.10.020openalex-snapshot

Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival

inferredcites →https://doi.org/10.1016/j.jbiotec.2011.01.010openalex-snapshot

Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid

inferredcites →https://doi.org/10.1016/j.plaphy.2008.01.004openalex-snapshot

Root tip-dependent, active riboflavin secretion by Hyoscyamus albus hairy roots under iron deficiency

inferredcites →https://doi.org/10.1038/320057a0openalex-snapshot

Botryococcane in a new class of Australian non-marine crude oils

inferredcites →https://doi.org/10.1038/ismej.2014.9openalex-snapshot

Direct exchange of vitamin B12 is demonstrated by modelling the growth dynamics of algal–bacterial cocultures

inferredcites →https://doi.org/10.1038/nature04056openalex-snapshot

Algae acquire vitamin B12 through a symbiotic relationship with bacteria

inferredcites →https://doi.org/10.1038/nature14488openalex-snapshot

Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria

inferredcites →https://doi.org/10.1038/nature18850openalex-snapshot

Microbiome-wide association studies link dynamic microbial consortia to disease

inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot

Fast gapped-read alignment with Bowtie 2

inferredcites →https://doi.org/10.1038/nmeth.2604openalex-snapshot

UPARSE: highly accurate OTU sequences from microbial amplicon reads

inferredcites →https://doi.org/10.1038/nmeth.3176openalex-snapshot

Fast and sensitive protein alignment using DIAMOND

inferredcites →https://doi.org/10.1038/nmicrobiol.2017.65openalex-snapshot

Zooming in on the phycosphere: the ecological interface for phytoplankton–bacteria relationships

inferredcites →https://doi.org/10.1038/nrmicro2937openalex-snapshot

Bacteriocins — a viable alternative to antibiotics?

inferredcites →https://doi.org/10.1038/s41467-018-07343-2openalex-snapshot

The structure and function of the global citrus rhizosphere microbiome

inferredcites →https://doi.org/10.1038/s41564-018-0180-0openalex-snapshot

Abundance determines the functional role of bacterial phylotypes in complex communities

inferredcites →https://doi.org/10.1038/s41579-018-0004-5openalex-snapshot

The social network of microorganisms — how auxotrophies shape complex communities

inferredcites →https://doi.org/10.1038/srep10467openalex-snapshot

A novel alphaproteobacterial ectosymbiont promotes the growth of the hydrocarbon-rich green alga Botryococcus braunii

inferredcites →https://doi.org/10.1051/agro:2003011openalex-snapshot

Rhizodeposition of organic C by plants: mechanisms and controls

inferredcites →https://doi.org/10.1073/pnas.1009566107openalex-snapshot

Most harmful algal bloom species are vitamin B 1 and B 12 auxotrophs

inferredcites →https://doi.org/10.1080/07388550290789513openalex-snapshot

Botryococcus braunii : A Renewable Source of Hydrocarbons and Other Chemicals

inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot

The Sequence Alignment/Map format and SAMtools

inferredcites →https://doi.org/10.1093/bioinformatics/btq461openalex-snapshot

Search and clustering orders of magnitude faster than BLAST

inferredcites →https://doi.org/10.1093/bioinformatics/btr507openalex-snapshot

FLASH: fast length adjustment of short reads to improve genome assemblies

inferredcites →https://doi.org/10.1093/bioinformatics/btu153openalex-snapshot

Prokka: rapid prokaryotic genome annotation

inferredcites →https://doi.org/10.1093/bioinformatics/btu356openalex-snapshot

Toward better understanding of artifacts in variant calling from high-coverage samples

inferredcites →https://doi.org/10.1093/bioinformatics/btv351openalex-snapshot

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

inferredcites →https://doi.org/10.1093/femsec/fiw146openalex-snapshot

The gut microbiome of the sea urchin, Lytechinus variegatus , from its natural habitat demonstrates selective attributes of microbial taxa and predictive metabolic profiles

inferredcites →https://doi.org/10.1093/molbev/msw054openalex-snapshot

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

inferredcites →https://doi.org/10.1093/molbev/msx319openalex-snapshot

BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics

inferredcites →https://doi.org/10.1093/nar/gkg312openalex-snapshot

GenDB--an open source genome annotation system for prokaryote genomes

inferredcites →https://doi.org/10.1093/nar/gkt1223openalex-snapshot

Pfam: the protein families database

inferredcites →https://doi.org/10.1093/nar/gkv1189openalex-snapshot

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

inferredcites →https://doi.org/10.1093/nar/gkw1092openalex-snapshot

KEGG: new perspectives on genomes, pathways, diseases and drugs

inferredcites →https://doi.org/10.1093/nar/gkw255openalex-snapshot

EDGAR 2.0: an enhanced software platform for comparative gene content analyses

inferredcites →https://doi.org/10.1093/nar/gkx319openalex-snapshot

antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification

inferredcites →https://doi.org/10.1093/nar/gky418openalex-snapshot

dbCAN2: a meta server for automated carbohydrate-active enzyme annotation

inferredcites →https://doi.org/10.1101/gr.215087.116openalex-snapshot

Canu: scalable and accurate long-read assembly via adaptive k -mer weighting and repeat separation

inferredcites →https://doi.org/10.1111/1462-2920.14133openalex-snapshot

Mosaic patterns of B‐vitamin synthesis and utilization in a natural marine microbial community

inferredcites →https://doi.org/10.1111/brv.12395openalex-snapshot

Phytoplankton defence mechanisms: traits and trade‐offs

inferredcites →https://doi.org/10.1111/j.0022-3646.1985.00380.xopenalex-snapshot

BACTERIAL INFLUENCE UPON GROWTH AND HYDROCARBON PRODUCTION OF THE GREEN ALGABOTRYOCOCCUS BRAUNII1

inferredcites →https://doi.org/10.1111/j.1574-6941.2007.00386.xopenalex-snapshot

Testing the functional significance of microbial composition in natural communities

inferredcites →https://doi.org/10.1126/science.1155725openalex-snapshot

Evolution of Mammals and Their Gut Microbes

inferredcites →https://doi.org/10.1126/science.1174404openalex-snapshot

Next-Generation Communication

inferredcites →https://doi.org/10.1128/aem.00062-07openalex-snapshot

Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy

inferredcites →https://doi.org/10.1128/aem.01938-17openalex-snapshot

Identifying the Active Microbiome Associated with Roots and Rhizosphere Soil of Oilseed Rape

inferredcites →https://doi.org/10.1128/ec.00097-06openalex-snapshot

Algae Need Their Vitamins

inferredcites →https://doi.org/10.1146/annurev-marine-120710-100912openalex-snapshot

The Role of B Vitamins in Marine Biogeochemistry

inferredcites →https://doi.org/10.1146/annurev.ecolsys.36.102403.114735openalex-snapshot

The Evolution of Multicellularity: A Minor Major Transition?

inferredcites →https://doi.org/10.1146/annurev.es.13.110182.001451openalex-snapshot

Interactions Between Bacteria and Algae in Aquatic Ecosystems

inferredcites →https://doi.org/10.1186/1471-2105-11-119openalex-snapshot

Prodigal: prokaryotic gene recognition and translation initiation site identification

inferredcites →https://doi.org/10.1186/1471-2164-13-576openalex-snapshot

Bio-crude transcriptomics: Gene discovery and metabolic network reconstruction for the biosynthesis of the terpenome of the hydrocarbon oil-producing green alga, Botryococcus braunii race B (Showa)*

inferredcites →https://doi.org/10.1186/gb-2012-13-12-r122openalex-snapshot

Ray Meta: scalable de novo metagenome assembly and profiling

inferredcites →https://doi.org/10.1186/s12864-016-2561-1openalex-snapshot

Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes

inferredcites →https://doi.org/10.1186/s13068-017-0871-4openalex-snapshot

Highly efficient methane generation from untreated microalgae biomass

inferredcites →https://doi.org/10.1371/journal.pcbi.1004957openalex-snapshot

MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data

inferredcites →https://doi.org/10.1371/journal.pone.0009490openalex-snapshot

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

inferredcites →https://doi.org/10.1371/journal.pone.0105592openalex-snapshot

Development of a Prokaryotic Universal Primer for Simultaneous Analysis of Bacteria and Archaea Using Next-Generation Sequencing

inferredcites →https://doi.org/10.1371/journal.pone.0112963openalex-snapshot

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

inferredcites →https://doi.org/10.1371/journal.pone.0198976openalex-snapshot

Metabolic survey of Botryococcus braunii: Impact of the physiological state on product formation

inferredcites →https://doi.org/10.2144/97234bm22openalex-snapshot

Simplified Agar Plate Method for Quantifying Viable Bacteria

inferredcites →https://doi.org/10.3389/fmicb.2014.00144openalex-snapshot

Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce

inferredcites →https://doi.org/10.3389/fmicb.2017.01941openalex-snapshot

Insights into Microalga and Bacteria Interactions of Selected Phycosphere Biofilms Using Metagenomic, Transcriptomic, and Proteomic Approaches

inferredcites →https://doi.org/10.3390/md14050100openalex-snapshot

Impact of Microalgae-Bacteria Interactions on the Production of Algal Biomass and Associated Compounds

inferredcites →https://doi.org/10.4014/jmb.1605.05083openalex-snapshot

Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis

inferredcites →https://doi.org/10.7717/peerj.1165openalex-snapshot

MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.biortech.2020.123825openalex-snapshot

Wastewater-borne microalga Chlamydomonas sp.: A robust chassis for efficient biomass and biomethane production applying low-N cultivation strategy

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.