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Immunological Diversity with Similarity
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/(sici)1521-4141(199803)28:03<989::aid-immu989>3.0.co;2-1openalex-snapshot
Polyreactive antigen-binding B cells are the predominant cell type in the newborn B cell repertoire
inferredcites →https://doi.org/10.1002/ece3.1155openalex-snapshot
Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories
inferredcites →https://doi.org/10.1002/ecm.1343openalex-snapshot
An attribute‐diversity approach to functional diversity, functional beta diversity, and related (dis)similarity measures
inferredcites →https://doi.org/10.1002/pro.5560070902openalex-snapshot
Kinetic epitope mapping of the chicken lysozyme.HyHEL‐10 fab complex: Delineation of docking trajectories
inferredcites →https://doi.org/10.1006/jtbi.1997.0495openalex-snapshot
Deriving Shape Space Parameters from Immunological Data
inferredcites →https://doi.org/10.1016/0022-5193(79)90275-3openalex-snapshot
Theoretical studies of clonal selection: Minimal antibody repertoire size and reliability of self-non-self discrimination
inferredcites →https://doi.org/10.1016/0161-5890(87)90050-2openalex-snapshot
The E-T (Elephant-Tadpole) paradox necessitates the concept of a unit of b-cell function: The protecton
inferredcites →https://doi.org/10.1016/j.clim.2018.01.011openalex-snapshot
Plasmablast antibody repertoires in elderly influenza vaccine responders exhibit restricted diversity but increased breadth of binding across influenza strains
inferredcites →https://doi.org/10.1016/j.immuni.2008.04.010openalex-snapshot
Endogenous Naive CD8+ T Cell Precursor Frequency Regulates Primary and Memory Responses to Infection
inferredcites →https://doi.org/10.1016/j.it.2004.02.004openalex-snapshot
Polyreactivity of antibody molecules
inferredcites →https://doi.org/10.1016/j.jmb.2010.09.028openalex-snapshot
A Simple Definition of Structural Regions in Proteins and Its Use in Analyzing Interface Evolution
inferredcites →https://doi.org/10.1016/s1074-7613(00)00006-6openalex-snapshot
Diversity in the CDR3 Region of VH Is Sufficient for Most Antibody Specificities
inferredcites →https://doi.org/10.1038/nbt.3769openalex-snapshot
Mutation effects predicted from sequence co-variation
inferredcites →https://doi.org/10.1038/ncomms11881openalex-snapshot
Robust estimates of overall immune-repertoire diversity from high-throughput measurements on samples
inferredcites →https://doi.org/10.1038/ng.3822openalex-snapshot
Immunosequencing identifies signatures of cytomegalovirus exposure history and HLA-mediated effects on the T cell repertoire
inferredcites →https://doi.org/10.1073/pnas.1312146110openalex-snapshot
Genetic measurement of memory B-cell recall using antibody repertoire sequencing
inferredcites →https://doi.org/10.1073/pnas.1403278111openalex-snapshot
Antibody repertoire deep sequencing reveals antigen-independent selection in maturing B cells
inferredcites →https://doi.org/10.1073/pnas.1409155111openalex-snapshot
Diversity and clonal selection in the human T-cell repertoire
inferredcites →https://doi.org/10.1073/pnas.1617959114openalex-snapshot
Phylogenetic analysis of the human antibody repertoire reveals quantitative signatures of immune senescence and aging
inferredcites →https://doi.org/10.1074/jbc.m102863200openalex-snapshot
Alanine Scanning Mutagenesis of a Type 1 Insulin-like Growth Factor Receptor Ligand Binding Site
inferredcites →https://doi.org/10.1080/01621459.1993.10594330openalex-snapshot
Estimating the Number of Species: A Review
inferredcites →https://doi.org/10.1083/jcb.201508021openalex-snapshot
Cell biology of the future: Nanometer-scale cellular cartography
inferredcites →https://doi.org/10.1084/jem.20040437openalex-snapshot
Age-related CD8 T Cell Clonal Expansions Constrict CD8 T Cell Repertoire and Have the Potential to Impair Immune Defense
inferredcites →https://doi.org/10.1086/682369openalex-snapshot
Extending the Concept of Diversity Partitioning to Characterize Phenotypic Complexity
inferredcites →https://doi.org/10.1093/aje/kwf113openalex-snapshot
Multi-Ethnic Study of Atherosclerosis: Objectives and Design
inferredcites →https://doi.org/10.1093/bioinformatics/bty635openalex-snapshot
SKEMPI 2.0: an updated benchmark of changes in protein–protein binding energy, kinetics and thermodynamics upon mutation
inferredcites →https://doi.org/10.1093/nar/gkt1043openalex-snapshot
SAbDab: the structural antibody database
inferredcites →https://doi.org/10.1093/nar/gkx971openalex-snapshot
STCRDab: the structural T-cell receptor database
inferredcites →https://doi.org/10.1110/ps.8.5.958openalex-snapshot
Energetic analysis of an antigen/antibody interface: Alanine scanning mutagenesis and double mutant cycles on the hyhel‐10/lysozyme interaction
inferredcites →https://doi.org/10.1111/ecog.02009openalex-snapshot
The generalized replication principle and the partitioning of functional diversity into independent alpha and beta components
inferredcites →https://doi.org/10.1111/imr.12654openalex-snapshot
TCR repertoire evolution during maintenance of CMV ‐specific T‐cell populations
inferredcites →https://doi.org/10.1111/j.1469-185x.1965.tb00815.xopenalex-snapshot
PATTERNS OF SPECIES DIVERSITY
inferredcites →https://doi.org/10.1111/j.1474-9726.2008.00443.xopenalex-snapshot
B‐cell diversity decreases in old age and is correlated with poor health status
inferredcites →https://doi.org/10.1111/j.1600-0706.2012.20607.xopenalex-snapshot
A metric of biodiversity that integrates abundance, phylogeny, and function
inferredcites →https://doi.org/10.1111/j.1752-4571.2008.00052.xopenalex-snapshot
PERSPECTIVE ARTICLE: Why do adaptive immune responses cross‐react?
inferredcites →https://doi.org/10.1126/science.1159052openalex-snapshot
Surface Sites for Engineering Allosteric Control in Proteins
inferredcites →https://doi.org/10.1126/science.1170020openalex-snapshot
High-Throughput Sequencing of the Zebrafish Antibody Repertoire
inferredcites →https://doi.org/10.1126/scitranslmed.3001442openalex-snapshot
Overlap and Effective Size of the Human CD8 + T Cell Receptor Repertoire
inferredcites →https://doi.org/10.1126/scitranslmed.3004794openalex-snapshot
Lineage Structure of the Human Antibody Repertoire in Response to Influenza Vaccination
inferredcites →https://doi.org/10.1136/jcp.54.2.84openalex-snapshot
Investigation of CMV disease in immunocompromised patients
inferredcites →https://doi.org/10.1158/0008-5472.can-13-2357-topenalex-snapshot
Genetic and Phenotypic Diversity in Breast Tumor Metastases
inferredcites →https://doi.org/10.1172/jci.insight.122092openalex-snapshot
T cell receptor repertoire features associated with survival in immunotherapy-treated pancreatic ductal adenocarcinoma
inferredcites →https://doi.org/10.1186/s13073-015-0169-8openalex-snapshot
A bioinformatic framework for immune repertoire diversity profiling enables detection of immunological status
inferredcites →https://doi.org/10.1201/9781315119847-11openalex-snapshot
Quantifying lymphocyte receptor diversity
inferredcites →https://doi.org/10.1371/journal.pgen.1001162openalex-snapshot
Pervasive Cryptic Epistasis in Molecular Evolution
inferredcites →https://doi.org/10.1371/journal.pone.0022365openalex-snapshot
High-Resolution Description of Antibody Heavy-Chain Repertoires in Humans
inferredcites →https://doi.org/10.1371/journal.pone.0032118openalex-snapshot
Analyses of the Microbial Diversity across the Human Microbiome
inferredcites →https://doi.org/10.1371/journal.pone.0100014openalex-snapshot
Distance-Based Functional Diversity Measures and Their Decomposition: A Framework Based on Hill Numbers
inferredcites →https://doi.org/10.1371/journal.pone.0160853openalex-snapshot
A Public Database of Memory and Naive B-Cell Receptor Sequences
inferredcites →https://doi.org/10.1515/9780691220161openalex-snapshot
Immunology and Evolution of Infectious Disease
inferredcites →https://doi.org/10.18632/oncotarget.12106openalex-snapshot
Similarity and diversity of the tumor microenvironment in multiple metastases: critical implications for overall and progression-free survival of high-grade serous ovarian cancer
inferredcites →https://doi.org/10.1890/06-1736.1openalex-snapshot
PARTITIONING DIVERSITY INTO INDEPENDENT ALPHA AND BETA COMPONENTS
inferredcites →https://doi.org/10.1890/10-2402.1openalex-snapshot
Measuring diversity: the importance of species similarity
inferredcites →https://doi.org/10.2307/1934352openalex-snapshot
Diversity and Evenness: A Unifying Notation and Its Consequences
inferredcites →https://doi.org/10.3389/fimmu.2013.00485openalex-snapshot
Estimating the Diversity, Completeness, and Cross-Reactivity of the T Cell Repertoire
inferredcites →https://doi.org/10.4049/jimmunol.1302064openalex-snapshot
Age-Related Decrease in TCR Repertoire Diversity Measured with Deep and Normalized Sequence Profiling
inferredcites →https://doi.org/10.4049/jimmunol.152.9.4235openalex-snapshot
How many specific B cells are needed to protect against a virus?
inferredcites →https://doi.org/10.48550/arxiv.1510.04612openalex-snapshot
Quantification of the effect of mutations using a global probability model of natural sequence variation
inferredcites →https://doi.org/10.7554/elife.34300openalex-snapshot
Coevolution-based inference of amino acid interactions underlying protein function
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/978-1-0716-2115-8_17openalex-snapshot
Adaptive Immune Receptor Repertoire (AIRR) Community Guide to Repertoire Analysis
inferred← citeshttps://doi.org/10.1016/j.crmeth.2022.100269openalex-snapshot
Reference-based comparison of adaptive immune receptor repertoires
inferred← citeshttps://doi.org/10.1016/j.immuno.2022.100009openalex-snapshot
Recent advances in T-cell receptor repertoire analysis: Bridging the gap with multimodal single-cell RNA sequencing
inferred← citeshttps://doi.org/10.1038/s42003-023-04702-8openalex-snapshot
Signatures of T cell immunity revealed using sequence similarity with TCRDivER algorithm
inferred← citeshttps://doi.org/10.1038/s43586-023-00284-1openalex-snapshot
Adaptive immune receptor repertoire analysis
inferred← citeshttps://doi.org/10.1101/2020.06.18.159699openalex-snapshot
Private Antibody Repertoires Are Public
inferred← citeshttps://doi.org/10.1101/2021.01.11.417444openalex-snapshot
T-cell Receptor Diversity Estimates for Repertoires (TCRDivER) uses sequence similarity to find signatures of immune response
inferred← citeshttps://doi.org/10.1101/2021.04.19.440409openalex-snapshot
Individualized VDJ recombination predisposes the available Ig sequence space
inferred← citeshttps://doi.org/10.1101/519108openalex-snapshot
Repertoire-Based Diagnostics Using Statistical Biophysics
inferred← citeshttps://doi.org/10.1101/gr.275373.121openalex-snapshot
Individualized VDJ recombination predisposes the available Ig sequence space
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1000939/v1openalex-snapshot
ENRICH: Exploiting Image Similarity to Maximize Efficient Machine Learning in Medical Imaging
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Science and Advanced Computing — runs a structured editorial panel for researchers
publishing outside journals, and publishes on CiteStamp rails. Submission is free
and goes through ORCID: icsacinstitute.org/submit.