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Identifying conserved molecular mechanisms of thermo-acclimation in symbiotic organisms

https://doi.org/10.1101/492702
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inferredcites →https://doi.org/10.1007/pl00006957openalex-snapshot
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inferredcites →https://doi.org/10.1007/s00227-005-0114-2openalex-snapshot
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Photosynthetic performance of giant clams, Tridacna maxima and T. squamosa, Red Sea
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Do corals select zooxanthellae by alternative discharge?
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The behaviour of giant clams (Bivalvia: Cardiidae: Tridacninae)
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High diversity and host specificity observed among symbiotic dinoflagellates in reef coral communities from Hawaii
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Extraordinarily high giant clam density under protection in Tatakoto atoll (Eastern Tuamotu archipelago, French Polynesia)
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Real-time PCR reveals a high incidence of Symbiodinium clade D at low levels in four scleractinian corals across the Great Barrier Reef: implications for symbiont shuffling
inferredcites →https://doi.org/10.1007/s00338-008-0456-6openalex-snapshot
Understanding diversity in coral-algal symbiosis: a cluster-based approach to interpreting fine-scale genetic variation in the genus Symbiodinium
inferredcites →https://doi.org/10.1007/s00338-010-0696-0openalex-snapshot
Many corals host thermally resistant symbionts in high-temperature habitat
inferredcites →https://doi.org/10.1007/s003380100146openalex-snapshot
Coral bleaching: interpretation of thermal tolerance limits and thermal thresholds in tropical corals
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Ecologically meaningful transformations for ordination of species data
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Validation of Housekeeping Genes for Gene Expression Studies in Symbiodinium Exposed to Thermal and Light Stress
inferredcites →https://doi.org/10.1007/s10811-017-1127-1openalex-snapshot
Photophysiological and thermal tolerance of various genotypes of the coral endosymbiont Symbiodinium sp. (Dinophyceae)
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Microsatellite loci for Symbiodinium A3 (S. fitti) a common algal symbiont among Caribbean Acropora (stony corals) and Indo-Pacific giant clams (Tridacna)
inferredcites →https://doi.org/10.1007/s13199-016-0433-8openalex-snapshot
Molecular evidence of symbiotic activity between Symbiodinium and Tridacna maxima larvae
inferredcites →https://doi.org/10.1016/0022-0981(89)90109-3openalex-snapshot
The effect of sudden changes in temperature, light and salinity on the population density and export of zooxanthellae from the reef corals Stylophora pistillata Esper and Seriatopora hystrix Dana
inferredcites →https://doi.org/10.1016/0022-0981(92)90030-eopenalex-snapshot
Nutrition of the giant clam Tridacna gigas (L.) I. Contribution of filter feeding and photosynthates to respiration and growth
inferredcites →https://doi.org/10.1016/0022-0981(95)00044-ropenalex-snapshot
Nutrition of the giant clam Tridacna gigas (L.). II. Relative contributions of filter-feeding and the ammonium-nitrogen acquired and recycled by symbiotic alga towards total nitrogen requirements for tissue growth and metabolism
inferredcites →https://doi.org/10.1016/j.bbabio.2016.02.002openalex-snapshot
“Super-quenching” state protects Symbiodinium from thermal stress — Implications for coral bleaching
inferredcites →https://doi.org/10.1016/j.biocon.2013.01.017openalex-snapshot
Climate variability and massive mortalities challenge giant clam conservation and management efforts in French Polynesia atolls
inferredcites →https://doi.org/10.1016/j.fsi.2018.10.033openalex-snapshot
Oxidative stress, apoptosis activation and symbiosis disruption in giant clam Tridacna crocea under high temperature
inferredcites →https://doi.org/10.1016/j.jembe.2008.06.032openalex-snapshot
Early cellular changes are indicators of pre-bleaching thermal stress in the coral host
inferredcites →https://doi.org/10.1016/j.ppees.2006.04.001openalex-snapshot
The evolutionary history of Symbiodinium and scleractinian hosts—Symbiosis, diversity, and the effect of climate change
inferredcites →https://doi.org/10.1016/j.tpb.2017.10.005openalex-snapshot
Consequences of an uncertain mass mortality regime triggered by climate variability on giant clam population management in the Pacific Ocean
inferredcites →https://doi.org/10.1016/j.tplants.2015.01.006openalex-snapshot
Phytohormones in microalgae: a new opportunity for microalgal biotechnology?
inferredcites →https://doi.org/10.1016/j.ympev.2010.03.040openalex-snapshot
A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai’i
inferredcites →https://doi.org/10.1016/s0990-7440(02)01159-2openalex-snapshot
Effect of increased irradiance and thermal stress on the symbiosis of Symbiodinium microadriaticum and Tridacna gigas
inferredcites →https://doi.org/10.1017/s0376892917000212openalex-snapshot
Adaptive management for the sustainable exploitation of lagoon resources in remote islands: lessons from a massive El Niño-induced giant clam bleaching event in the Tuamotu atolls (French Polynesia)
inferredcites →https://doi.org/10.1038/40843openalex-snapshot
Landscape ecology of algal symbionts creates variation in episodes of coral bleaching
inferredcites →https://doi.org/10.1038/430742aopenalex-snapshot
Thermal adaptation in reef coral symbionts
inferredcites →https://doi.org/10.1038/nature09670openalex-snapshot
Climate change and evolutionary adaptation
inferredcites →https://doi.org/10.1038/nmeth.3869openalex-snapshot
DADA2: High-resolution sample inference from Illumina amplicon data
inferredcites →https://doi.org/10.1038/nprot.2013.084openalex-snapshot
De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity
inferredcites →https://doi.org/10.1038/s41559-016-0014openalex-snapshot
Gene expression plasticity as a mechanism of coral adaptation to a variable environment
inferredcites →https://doi.org/10.1038/s41598-017-15029-wopenalex-snapshot
Signatures of adaptation and symbiosis in genomes and transcriptomes of Symbiodinium
inferredcites →https://doi.org/10.1038/s41598-018-28948-zopenalex-snapshot
GOATOOLS: A Python library for Gene Ontology analyses
inferredcites →https://doi.org/10.1038/s42003-018-0098-3openalex-snapshot
Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis
inferredcites →https://doi.org/10.1038/srep08562openalex-snapshot
Symbiodinium thermophilum sp. nov., a thermotolerant symbiotic alga prevalent in corals of the world's hottest sea, the Persian/Arabian Gulf
inferredcites →https://doi.org/10.1038/srep15667openalex-snapshot
Intraspecific diversity among partners drives functional variation in coral symbioses
inferredcites →https://doi.org/10.1042/bst0361120openalex-snapshot
Exploring the mechanism of tryptophan 2,3-dioxygenase
inferredcites →https://doi.org/10.1046/j.0016-8025.2003.01111.xopenalex-snapshot
The impact of bleaching on the metabolic contribution of dinoflagellate symbionts to their giant clam host
inferredcites →https://doi.org/10.1046/j.1365-3040.1998.00345.xopenalex-snapshot
Temperature‐induced bleaching of corals begins with impairment of the CO2 fixation mechanism in zooxanthellae
inferredcites →https://doi.org/10.1046/j.1529-8817.2000.00010.xopenalex-snapshot
CONSPECIFICITY AND INDO‐PACIFIC DISTRIBUTION OF SYMBIODINIUM GENOTYPES (DINOPHYCEAE) FROM GIANT CLAMS
inferredcites →https://doi.org/10.1046/j.1529-8817.2001.01031.xopenalex-snapshot
INVESTIGATING THE BIODIVERSITY, ECOLOGY, AND PHYLOGENY OF ENDOSYMBIOTIC DINOFLAGELLATES IN THE GENUS SYMBIODINIUM USING THE ITS REGION: IN SEARCH OF A “SPECIES” LEVEL MARKER
inferredcites →https://doi.org/10.1073/pnas.0708049105openalex-snapshot
Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type
inferredcites →https://doi.org/10.1073/pnas.1210224110openalex-snapshot
Genomic basis for coral resilience to climate change
inferredcites →https://doi.org/10.1073/pnas.96.14.8007openalex-snapshot
Damage to photosystem II in symbiotic dinoflagellates: A determinant of coral bleaching
inferredcites →https://doi.org/10.1080/10641269409388557openalex-snapshot
The biology, exploitation, and mariculture of giant clams (Tridacnidae)
inferredcites →https://doi.org/10.1080/10715760400011437openalex-snapshot
Tryptophan Loading Induces Oxidative Stress
inferredcites →https://doi.org/10.1093/bioinformatics/btg412openalex-snapshot
APE: Analyses of Phylogenetics and Evolution in R language
inferredcites →https://doi.org/10.1093/bioinformatics/btu170openalex-snapshot
Trimmomatic: a flexible trimmer for Illumina sequence data
inferredcites →https://doi.org/10.1093/bioinformatics/btv351openalex-snapshot
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
inferredcites →https://doi.org/10.1093/molbev/msu107openalex-snapshot
Lineage-Specific Transcriptional Profiles of Symbiodinium spp. Unaltered by Heat Stress in a Coral Host
inferredcites →https://doi.org/10.1093/molbev/msw119openalex-snapshot
Sex, Scavengers, and Chaperones: Transcriptome Secrets of DivergentSymbiodiniumThermal Tolerances
inferredcites →https://doi.org/10.1093/molbev/msw201openalex-snapshot
Sex, Scavengers, and Chaperones: Transcriptome Secrets of Divergent Symbiodinium Thermal Tolerances
inferredcites →https://doi.org/10.1098/rsif.2014.0678openalex-snapshot
Photosymbiotic giant clams are transformers of solar flux
inferredcites →https://doi.org/10.1098/rsos.140214openalex-snapshot
Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a reef-building coral
inferredcites →https://doi.org/10.1098/rsos.170253openalex-snapshot
Expression of a symbiosis-specific gene in Symbiodinium type A1 associated with coral, nudibranch and giant clam larvae
inferredcites →https://doi.org/10.1098/rspb.2006.3567openalex-snapshot
The role of zooxanthellae in the thermal tolerance of corals: a ‘nugget of hope’ for coral reefs in an era of climate change
inferredcites →https://doi.org/10.1098/rspb.2012.0055openalex-snapshot
Specificity is rarely absolute in coral–algal symbiosis: implications for coral response to climate change
inferredcites →https://doi.org/10.1098/rspb.2012.1454openalex-snapshot
Endosymbiotic flexibility associates with environmental sensitivity in scleractinian corals
inferredcites →https://doi.org/10.1101/672907openalex-snapshot
Effects of temperature and p CO 2 on the respiration, biomineralization and photophysiology of the giant clam Tridacna maxima
inferredcites →https://doi.org/10.1104/pp.17.00744openalex-snapshot
The Arabidopsis DNA Methylome Is Stable under Transgenerational Drought Stress
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05153.xopenalex-snapshot
Differential sensitivity of coral larvae to natural levels of ultraviolet radiation during the onset of larval competence
inferredcites →https://doi.org/10.1111/j.1365-3040.2005.01324.xopenalex-snapshot
Effects of moderate heat stress on photosynthesis: importance of thylakoid reactions, rubisco deactivation, reactive oxygen species, and thermotolerance provided by isoprene
inferredcites →https://doi.org/10.1111/j.1462-5822.2006.00765.xopenalex-snapshot
Lectin/glycan interactions play a role in recognition in a coral/dinoflagellate symbiosis
inferredcites →https://doi.org/10.1111/mec.12982openalex-snapshot
Compartment‐specific transcriptomics in a reef‐building coral exposed to elevated temperatures
inferredcites →https://doi.org/10.1111/mec.14162openalex-snapshot
Impacts of temperature and lunar day on gene expression profiles during a monthly reproductive cycle in the brooding coral Pocillopora damicornis
inferredcites →https://doi.org/10.1126/science.1085046openalex-snapshot
Climate Change, Human Impacts, and the Resilience of Coral Reefs
inferredcites →https://doi.org/10.1126/science.1152509openalex-snapshot
Coral Reefs Under Rapid Climate Change and Ocean Acidification
inferredcites →https://doi.org/10.1126/science.156.3774.516openalex-snapshot
Glycerol Excretion by Symbiotic Algae from Corals and Tridacna and Its Control by the Host
inferredcites →https://doi.org/10.1126/science.42.1074.161openalex-snapshot
The Proceedings of the National Academy of Sciences
inferredcites →https://doi.org/10.1146/annurev.ecolsys.34.011802.132417openalex-snapshot
Flexibility and Specificity in Coral-Algal Symbiosis: Diversity, Ecology, and Biogeography of Symbiodinium
inferredcites →https://doi.org/10.1146/ecolsys.693openalex-snapshot
Annual Review of Ecology, Evolution, and Systematics
inferredcites →https://doi.org/10.1186/1471-2105-9-559openalex-snapshot
WGCNA: an R package for weighted correlation network analysis
inferredcites →https://doi.org/10.1186/1471-2148-12-217openalex-snapshot
Protein evolution in two co-occurring types of Symbiodinium: an exploration into the genetic basis of thermal tolerance in Symbiodinium clade D
inferredcites →https://doi.org/10.1186/1471-2164-15-591openalex-snapshot
Coral-zooxanthellae meta-transcriptomics reveals integrated response to pollutant stress
inferredcites →https://doi.org/10.1186/s13059-017-1263-6openalex-snapshot
Epigenetic and chromatin-based mechanisms in environmental stress adaptation and stress memory in plants
inferredcites →https://doi.org/10.1186/s40168-018-0470-zopenalex-snapshot
Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin
inferredcites →https://doi.org/10.1242/bio.017921openalex-snapshot
Changes in fatty acid composition in the giant clamTridacna maximain response to thermal stress
inferredcites →https://doi.org/10.1371/journal.pone.0006262openalex-snapshot
Reef Endemism, Host Specificity and Temporal Stability in Populations of Symbiotic Dinoflagellates from Two Ecologically Dominant Caribbean Corals
inferredcites →https://doi.org/10.1371/journal.pone.0021800openalex-snapshot
REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
inferredcites →https://doi.org/10.1371/journal.pone.0172285openalex-snapshot
Zooxanthellal genetic varieties in giant clams are partially determined by species-intrinsic and growth-related characteristics
inferredcites →https://doi.org/10.2307/1541400openalex-snapshot
PHOTOSYNTHESIS AND RESPIRATION INTRIDACNA GIGASAS A FUNCTION OF IRRADIANCE AND SIZE
inferredcites →https://doi.org/10.2307/1542028openalex-snapshot
The Zooxanthellal Tubular System in the Giant Clam
inferredcites →https://doi.org/10.2983/035.035.0107openalex-snapshot
Identifying Robust Proxies of Gonad Maturation for the Protandrous HermaphroditeTridacna maxima(Röding, 1798, Bivalvia) from Individual to Population Scale
inferredcites →https://doi.org/10.32614/cran.package.veganopenalex-snapshot
vegan: Community Ecology Package
inferredcites →https://doi.org/10.3354/meps09413openalex-snapshot
Patterns of Symbiodinium distribution in three giant clam species across the biodiverse Bird’s Head region of Indonesia
inferredcites →https://doi.org/10.3354/meps115103openalex-snapshot
Contributions of phototrophic and heterotrophic nutrition to the metabolic and growth requirements of four species of giant clam (Tridacnidae)
inferredcites →https://doi.org/10.3354/meps321001openalex-snapshot
Most corals may not change their symbionts
inferredcites →https://doi.org/10.3389/fgene.2018.00037openalex-snapshot
RNA-Seq Reveals Extensive Transcriptional Response to Heat Stress in the Stony Coral Galaxea fascicularis
inferredcites →https://doi.org/10.3389/fpls.2015.00267openalex-snapshot
Genetic and epigenetic control of plant heat responses
inferredcites →https://doi.org/10.3389/fpls.2017.00161openalex-snapshot
Abscisic Acid Signaling and Abiotic Stress Tolerance in Plants: A Review on Current Knowledge and Future Prospects
inferredcites →https://doi.org/10.3389/fpls.2017.00271openalex-snapshot
Transcriptomic Analysis of Thermally Stressed Symbiodinium Reveals Differential Expression of Stress and Metabolism Genes
inferredcites →https://doi.org/10.4319/lo.2008.53.5.1853openalex-snapshot
Diversity in populations of free‐living Symbiodinium from a Caribbean and Pacific reef
inferredcites →https://doi.org/10.5772/65233openalex-snapshot
Serotonin - A Chemical Messenger Between All Types of Living Cells
inferredcites →https://doi.org/10.7717/peerj.2856openalex-snapshot
An updated assessment of Symbiodinium spp. that associate with common scleractinian corals from Moorea (French Polynesia) reveals high diversity among background symbionts and a novel finding of clade B
inferredcites →https://doi.org/10.7717/peerj.3472openalex-snapshot
Using high-throughput sequencing of ITS2 to describe Symbiodinium metacommunities in St. John, US Virgin Islands
inferredcites →https://doi.org/10.7717/peerj.394openalex-snapshot
Multi-gene analysis of Symbiodinium dinoflagellates: a perspective on rarity, symbiosis, and evolution
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