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Genotyping-by-sequencing reveals the effects of riverscape, climate and interspecific introgression on the genetic diversity and local adaptation of the endangered Mexican golden trout ( Oncorhynchus chrysogaster )

https://doi.org/10.1101/500041
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Conservation genetics and genomics of threatened vertebrates in China
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Aquatic Landscape Genomics and Environmental Effects on Genetic Variation
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Considering evolutionary processes in conservation biology
inferredcites →https://doi.org/10.1016/s0169-5347(01)02290-xopenalex-snapshot
The problems with hybrids: setting conservation guidelines
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Microsatellite analyses of the trout of northwest Mexico)
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Mexican native trouts: a review of their history and current systematic and conservation status
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The genetic legacy of the Quaternary ice ages
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Dynamic biogeography and conservation of endangered species
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Genetic evidence of hybridization between the critically endangered Cuban crocodile and the American crocodile: implications for population history and in situ/ex situ conservation
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Contemporary fisherian life-history evolution in small salmonid populations
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The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates
inferredcites →https://doi.org/10.1046/j.1523-1739.2002.01476.xopenalex-snapshot
Effects of Habitat Fragmentation by Damming on the Persistence of Stream‐Dwelling Charr Populations
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Recent genetic changes in enhanced populations of sea trout (Salmo truttam.trutta) in the southern Baltic rivers revealed with SNP analysis
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Considering adaptive genetic variation in climate change vulnerability assessment reduces species range loss projections
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Influence of Forest Road Culverts and Waterfalls on the Fine‐Scale Distribution of Brook Trout Genetic Diversity in a Boreal Watershed
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Conservation of Native Pacific Trout Diversity in Western North America
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Finding the Genomic Basis of Local Adaptation: Pitfalls, Practical Solutions, and Future Directions
inferredcites →https://doi.org/10.1093/acprof:oso/9780199214211.001.0001openalex-snapshot
Evolutionary Conservation Genetics
inferredcites →https://doi.org/10.1093/bioinformatics/btn129openalex-snapshot
adegenet : a R package for the multivariate analysis of genetic markers
inferredcites →https://doi.org/10.1093/bioinformatics/btr330openalex-snapshot
The variant call format and VCFtools
inferredcites →https://doi.org/10.1093/cz/zow088openalex-snapshot
Detecting polygenic selection in marine populations by combining population genomics and quantitative genetics approaches
inferredcites →https://doi.org/10.1093/icb/38.2.291openalex-snapshot
Cholesterol Function in Plasma Membranes from Ectotherms: Membrane-Specific Roles in Adaptation to Temperature
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Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models
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Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040454openalex-snapshot
The neighbor-joining method: a new method for reconstructing phylogenetic trees.
inferredcites →https://doi.org/10.1098/rsbl.2009.0033openalex-snapshot
Hybridization rapidly reduces fitness of a native trout in the wild
inferredcites →https://doi.org/10.1098/rspb.2015.2601openalex-snapshot
Effective number of breeders, effective population size and their relationship with census size in an iteroparous species, Salvelinus fontinalis
inferredcites →https://doi.org/10.1108/eb003648openalex-snapshot
An introduction to
inferredcites →https://doi.org/10.1111/1755-0998.12157openalex-snapshot
NeEstimator v2: re‐implementation of software for the estimation of contemporary effective population size ( N e ) from genetic data
inferredcites →https://doi.org/10.1111/1755-0998.12592openalex-snapshot
pcadapt : an R package to perform genome scans for selection based on principal component analysis
inferredcites →https://doi.org/10.1111/2041-210x.12382openalex-snapshot
LEA: An R package for landscape and ecological association studies
inferredcites →https://doi.org/10.1111/2041-210x.12608openalex-snapshot
CDM eta POP : an individual‐based, eco‐evolutionary model for spatially explicit simulation of landscape demogenetics
inferredcites →https://doi.org/10.1111/brv.12000openalex-snapshot
Individual dispersal, landscape connectivity and ecological networks
inferredcites →https://doi.org/10.1111/eva.12135openalex-snapshot
Plastic and evolutionary responses to climate change in fish
inferredcites →https://doi.org/10.1111/eva.12416openalex-snapshot
Ancestry and adaptive evolution of anadromous, resident, and adfluvial rainbow trout (Oncorhynchus mykiss) in the San Francisco bay area: application of adaptive genomic variation to conservation in a highly impacted landscape
inferredcites →https://doi.org/10.1111/eva.12569openalex-snapshot
Guidelines for planning genomic assessment and monitoring of locally adaptive variation to inform species conservation
inferredcites →https://doi.org/10.1111/eva.12659openalex-snapshot
Recent advances in conservation and population genomics data analysis
inferredcites →https://doi.org/10.1111/eva.12661openalex-snapshot
Next‐generation conservation genetics and biodiversity monitoring
inferredcites →https://doi.org/10.1111/evo.12139openalex-snapshot
LANDSCAPE GENOMICS IN ATLANTIC SALMON ( SALMO SALAR ): SEARCHING FOR GENE-ENVIRONMENT INTERACTIONS DRIVING LOCAL ADAPTATION
inferredcites →https://doi.org/10.1111/fme.12169openalex-snapshot
Comparing estimates of number of breeders Nb based on microsatellites and single nucleotide polymorphism of three groups of brown trout (Salmo trutta L.)
inferredcites →https://doi.org/10.1111/fwb.12193openalex-snapshot
Role of environmental factors in the spread of domestic trout in Mediterranean streams
inferredcites →https://doi.org/10.1111/gcb.13681openalex-snapshot
Legacy introductions and climatic variation explain spatiotemporal patterns of invasive hybridization in a native trout
inferredcites →https://doi.org/10.1111/gec3.12032openalex-snapshot
Seascape Genetics: Populations, Individuals, and Genes Marooned and Adrift
inferredcites →https://doi.org/10.1111/j.1095-8649.2007.01682.xopenalex-snapshot
Introduction, establishment and effects of non‐native salmonids: considering the risk of rainbow trout invasion in the United Kingdom*
inferredcites →https://doi.org/10.1111/j.1095-8649.2008.01876.xopenalex-snapshot
A description of the origins, design and performance of the TRAITS–SGP Atlantic salmonSalmo salarL. cDNA microarray
inferredcites →https://doi.org/10.1111/j.1365-294x.2007.03659.xopenalex-snapshot
Genetic variation across species’ geographical ranges: the central–marginal hypothesis and beyond
inferredcites →https://doi.org/10.1111/j.1365-294x.2008.03856.xopenalex-snapshot
In‐stream and overland dispersal across a river network influences gene flow in a freshwater insect, Calopteryx splendens
inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04656.xopenalex-snapshot
Spurious correlations and inference in landscape genetics
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05210.xopenalex-snapshot
Fine‐scale population structure and riverscape genetics of brook trout (Salvelinus fontinalis) distributed continuously along headwater channel networks
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05266.xopenalex-snapshot
Determinants of hierarchical genetic structure in Atlantic salmon populations: environmental factors vs. anthropogenic influences
inferredcites →https://doi.org/10.1111/j.1471-8286.2004.00770.xopenalex-snapshot
genotype and genodive : two programs for the analysis of genetic diversity of asexual organisms
inferredcites →https://doi.org/10.1111/j.1523-1739.2008.00953.xopenalex-snapshot
Managing Aquatic Species of Conservation Concern in the Face of Climate Change and Invasive Species
inferredcites →https://doi.org/10.1111/j.1752-4571.2008.00015.xopenalex-snapshot
Estimation of effective number of breeders from molecular coancestry of single cohort sample
inferredcites →https://doi.org/10.1111/j.1755-0998.2011.03077.xopenalex-snapshot
Effects of sample size, number of markers, and allelic richness on the detection of spatial genetic pattern
inferredcites →https://doi.org/10.1111/j.2041-210x.2010.00081.xopenalex-snapshot
PASSaGE: Pattern Analysis, Spatial Statistics and Geographic Exegesis. Version 2
inferredcites →https://doi.org/10.1111/jbi.13246openalex-snapshot
The interplay of riverscape features and exotic introgression on the genetic structure of the Mexican golden trout (Oncorhynchus chrysogaster), a simulation approach
inferredcites →https://doi.org/10.1111/jfb.13168openalex-snapshot
Saving the spandrels? Adaptive genomic variation in conservation and fisheries management
inferredcites →https://doi.org/10.1111/mec.12354openalex-snapshot
Stacks: an analysis tool set for population genomics
inferredcites →https://doi.org/10.1111/mec.12568openalex-snapshot
Outlier SNP markers reveal fine‐scale genetic structuring across E uropean hake populations ( M erluccius merluccius)
inferredcites →https://doi.org/10.1111/mec.13409openalex-snapshot
Environmental adaptation in Chinook salmon ( Oncorhynchus tshawytscha ) throughout their North American range
inferredcites →https://doi.org/10.1111/mec.13517openalex-snapshot
Climate variables explain neutral and adaptive variation within salmonid metapopulations: the importance of replication in landscape genetics
inferredcites →https://doi.org/10.1111/mec.13527openalex-snapshot
Navigating the pitfalls and promise of landscape genetics
inferredcites →https://doi.org/10.1111/mec.13830openalex-snapshot
Riverscape genomics of a threatened fish across a hydroclimatically heterogeneous river basin
inferredcites →https://doi.org/10.1111/mec.14018openalex-snapshot
Investigating the extent of parallelism in morphological and genomic divergence among lake trout ecotypes in Lake Superior
inferredcites →https://doi.org/10.1111/mec.14361openalex-snapshot
Do genetic drift and accumulation of deleterious mutations preclude adaptation? Empirical investigation using RAD seq in a northern lacustrine fish
inferredcites →https://doi.org/10.1111/mec.14549openalex-snapshot
The search for loci under selection: trends, biases and progress
inferredcites →https://doi.org/10.1111/mec.14808openalex-snapshot
On the roles of landscape heterogeneity and environmental variation in determining population genomic structure in a dendritic system
inferredcites →https://doi.org/10.1111/mec.15100openalex-snapshot
Assessing thermal adaptation using family‐based association andFSToutlier tests in a threatened trout species
inferredcites →https://doi.org/10.1139/cjfas-2016-0511openalex-snapshot
Evidence of sound production by spawning lake trout (Salvelinus namaycush) in lakes Huron and Champlain
inferredcites →https://doi.org/10.1139/f08-025openalex-snapshot
Influence of landscape on resident and anadromous life history types of Oncorhynchus mykiss
inferredcites →https://doi.org/10.1139/f2012-027openalex-snapshot
Environmental factors correlate with hybridization in stocked brook charr (Salvelinus fontinalis)
inferredcites →https://doi.org/10.1146/annurev.ecolsys.37.091305.110100openalex-snapshot
Ecological and Evolutionary Responses to Recent Climate Change
inferredcites →https://doi.org/10.1186/1471-2164-12-404openalex-snapshot
Differential gene expression in male and female rainbow trout embryos prior to the onset of gross morphological differentiation of the gonads
inferredcites →https://doi.org/10.1186/s12864-017-3946-5openalex-snapshot
Novel efficient genome-wide SNP panels for the conservation of the highly endangered Iberian lynx
inferredcites →https://doi.org/10.1186/s12864-018-4579-zopenalex-snapshot
Combining six genome scan methods to detect candidate genes to salinity in the Mediterranean striped red mullet (Mullus surmuletus)
inferredcites →https://doi.org/10.1242/jeb.186.1.55openalex-snapshot
Effects of zinc on the kinetics of branchial calcium uptake in freshwater rainbow trout during adaptation to waterborne zinc
inferredcites →https://doi.org/10.1371/journal.pone.0016163openalex-snapshot
E2F1 Regulates Cellular Growth by mTORC1 Signaling
inferredcites →https://doi.org/10.1371/journal.pone.0141775openalex-snapshot
Genetic Structure of Pacific Trout at the Extreme Southern End of Their Native Range
inferredcites →https://doi.org/10.1371/journal.pone.0197571openalex-snapshot
Dam trout: Genetic variability in Oncorhynchus mykiss above and below barriers in three Columbia River systems prior to restoring migrational access
inferredcites →https://doi.org/10.1534/g3.111.000240openalex-snapshot
Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences
inferredcites →https://doi.org/10.1534/genetics.113.152462openalex-snapshot
Robust Identification of Local Adaptation from Allele Frequencies
inferredcites →https://doi.org/10.1534/genetics.114.164350openalex-snapshot
fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets
inferredcites →https://doi.org/10.1890/070146openalex-snapshot
Resource management in a changing and uncertain climate
inferredcites →https://doi.org/10.1890/1051-0761(2003)013[0038:ihbnct]2.0.co;2openalex-snapshot
INTROGRESSIVE HYBRIDIZATION BETWEEN NATIVE CUTTHROAT TROUT AND INTRODUCED RAINBOW TROUT
inferredcites →https://doi.org/10.2307/1104578openalex-snapshot
Miller's Trustees et al. v. Smith et al. March 13, 1913. [77 S. E. 462.]
inferredcites →https://doi.org/10.2307/1440847openalex-snapshot
A New Trout from Central Mexico: Salmo chrysogaster, the Mexican Golden Trout
inferredcites →https://doi.org/10.32614/cran.package.gdistanceopenalex-snapshot
gdistance: Distances and Routes on Geographical Grids
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