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Phylogenomics resolves major relationships and reveals significant diversification rate shifts in the evolution of silk moths and relatives

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/anbe.2002.4010openalex-snapshot

Synergy between visual and olfactory cues in nectar feeding by naıve hawkmoths, Manduca sexta

inferredcites →https://doi.org/10.1007/0-387-27733-1_6openalex-snapshot

HyPhy: Hypothesis Testing Using Phylogenies

inferredcites →https://doi.org/10.1007/978-3-319-67979-2_4openalex-snapshot

ASTRAL-III: Increased Scalability and Impacts of Contracting Low Support Branches

inferredcites →https://doi.org/10.1007/s10531-005-0306-6openalex-snapshot

Effects of Habitat Disturbance can be Subtle Yet Significant: Biodiversity of Hawkmoth-Assemblages (Lepidoptera: Sphingidae) in Southeast-Asia

inferredcites →https://doi.org/10.1016/0169-5347(96)81059-7openalex-snapshot

Reconstructing shifts in diversification rates on phylogenetic trees

inferredcites →https://doi.org/10.1016/j.cub.2017.08.058openalex-snapshot

Museum Genomics Confirms that the Lord Howe Island Stick Insect Survived Extinction

inferredcites →https://doi.org/10.1016/j.cub.2018.01.061openalex-snapshot

A Comprehensive and Dated Phylogenomic Analysis of Butterflies

inferredcites →https://doi.org/10.1016/j.ympev.2011.07.013openalex-snapshot

Reconstructing intraordinal relationships in Lepidoptera using mitochondrial genome data with the description of two newly sequenced lycaenids, Spindasis takanonis and Protantigius superans (Lepidoptera: Lycaenidae)

inferredcites →https://doi.org/10.1016/j.ympev.2014.05.031openalex-snapshot

Towards a mitogenomic phylogeny of Lepidoptera

inferredcites →https://doi.org/10.1016/s0169-5347(98)01359-7openalex-snapshot

Deep flowers for long tongues

inferredcites →https://doi.org/10.1017/s0094837300015840openalex-snapshot

Phylogenies and angiosperm diversification

inferredcites →https://doi.org/10.1038/360666a0openalex-snapshot

Exact tracking of pollen transfer and mating in plants

inferredcites →https://doi.org/10.1038/srep27726openalex-snapshot

Phylogenomic analyses of bat subordinal relationships based on transcriptome data

inferredcites →https://doi.org/10.1073/pnas.0703627104openalex-snapshot

Acoustic mimicry in a predator–prey interaction

inferredcites →https://doi.org/10.1073/pnas.1416679112openalex-snapshot

Tempo and mode of antibat ultrasound production and sonar jamming in the diverse hawkmoth radiation

inferredcites →https://doi.org/10.1073/pnas.1421926112openalex-snapshot

Moth tails divert bat attack: Evolution of acoustic deflection

inferredcites →https://doi.org/10.1080/106351599260030openalex-snapshot

How Should Species Phylogenies Be Inferred from Sequence Data?

inferredcites →https://doi.org/10.1093/bioinformatics/btg412openalex-snapshot

APE: Analyses of Phylogenetics and Evolution in R language

inferredcites →https://doi.org/10.1093/bioinformatics/btu033openalex-snapshot

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

inferredcites →https://doi.org/10.1093/bioinformatics/btu531openalex-snapshot

AliView: a fast and lightweight alignment viewer and editor for large datasets

inferredcites →https://doi.org/10.1093/bioinformatics/btv234openalex-snapshot

ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes

inferredcites →https://doi.org/10.1093/gbe/evt157openalex-snapshot

Phylotranscriptomics: Saturated Third Codon Positions Radically Influence the Estimation of Trees Based on Next-Gen Data

inferredcites →https://doi.org/10.1093/molbev/msh194openalex-snapshot

Comparison of Site-Specific Rate-Inference Methods for Protein Sequences: Empirical Bayesian Methods Are Superior

inferredcites →https://doi.org/10.1093/molbev/msm076openalex-snapshot

A Family Matter: Conclusive Resolution of the Taxonomic Position of the Long-Fingered Bats, Miniopterus

inferredcites →https://doi.org/10.1093/molbev/msq130openalex-snapshot

A Phylogenomic Approach to Resolve the Arthropod Tree of Life

inferredcites →https://doi.org/10.1093/molbev/msr317openalex-snapshot

Phylo-MCOA: A Fast and Efficient Method to Detect Outlier Genes and Species in Phylogenomics Using Multiple Co-inertia Analysis

inferredcites →https://doi.org/10.1093/molbev/mst024openalex-snapshot

Ultrafast Approximation for Phylogenetic Bootstrap

inferredcites →https://doi.org/10.1093/molbev/msu300openalex-snapshot

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

inferredcites →https://doi.org/10.1093/sysbio/38.1.26openalex-snapshot

Nonrandom Diversification with in Taxonomic Assemblages

inferredcites →https://doi.org/10.1093/sysbio/46.3.523openalex-snapshot

Gene Trees in Species Trees

inferredcites →https://doi.org/10.1093/sysbio/syq010openalex-snapshot

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

inferredcites →https://doi.org/10.1093/sysbio/sys049openalex-snapshot

Anchored Hybrid Enrichment for Massively High-Throughput Phylogenomics

inferredcites →https://doi.org/10.1093/sysbio/sys078openalex-snapshot

Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice

inferredcites →https://doi.org/10.1093/sysbio/syx048openalex-snapshot

Resolving Relationships among the Megadiverse Butterflies and Moths with a Novel Pipeline for Anchored Phylogenomics

inferredcites →https://doi.org/10.1093/sysbio/syx063openalex-snapshot

Why Concatenation Fails Near the Anomaly Zone

inferredcites →https://doi.org/10.1098/rsbl.2013.0161openalex-snapshot

Hawkmoths produce anti-bat ultrasound

inferredcites →https://doi.org/10.1098/rspb.2014.0970openalex-snapshot

Phylogenomics provides strong evidence for relationships of butterflies and moths

inferredcites →https://doi.org/10.1098/rspb.2018.1047openalex-snapshot

Origin and macroevolution of micro-moths on sunken Hawaiian Islands

inferredcites →https://doi.org/10.1109/bibm.2011.70openalex-snapshot

A Simple and Accurate Method for Rogue Taxon Identification

inferredcites →https://doi.org/10.1111/1755-0998.12655openalex-snapshot

Phylogenomics using formalin‐fixed and 100+ year‐old intractable natural history specimens

inferredcites →https://doi.org/10.1111/2041-210x.12199openalex-snapshot

BAMM tools: an R package for the analysis of evolutionary dynamics on phylogenetic trees

inferredcites →https://doi.org/10.1111/evo.12681openalex-snapshot

Speciation dynamics during the global radiation of extant bats

inferredcites →https://doi.org/10.1111/j.0014-3820.2005.tb00932.xopenalex-snapshot

BATS, CLOCKS, AND ROCKS: DIVERSIFICATION PATTERNS IN CHIROPTERA

inferredcites →https://doi.org/10.1111/j.1095-8312.1985.tb01549.xopenalex-snapshot

Monophily and pollination mechanisms in Angraecum arachnites Schltr. (Orchidaceae) in a guild of long-tongued hawk-moths (Sphingidae) in Madagascar

inferredcites →https://doi.org/10.1111/j.1365-3113.2007.00409.xopenalex-snapshot

A phylogenetic study of the ‘bombycoid complex’ (Lepidoptera) using five protein‐coding nuclear genes, with comments on the problem of macrolepidopteran phylogeny

inferredcites →https://doi.org/10.1111/j.1365-3113.2007.00410.xopenalex-snapshot

Molecular phylogeny of Anthelidae and other bombycoid taxa (Lepidoptera: Bombycoidea)

inferredcites →https://doi.org/10.1111/j.1365-3113.2007.00416.xopenalex-snapshot

Phylogenetic relationships of wild silkmoths (Lepidoptera: Saturniidae) inferred from four protein‐coding nuclear genes

inferredcites →https://doi.org/10.1111/j.1365-3113.2010.00543.xopenalex-snapshot

Increased gene sampling yields robust support for higher‐level clades within Bombycoidea (Lepidoptera)

inferredcites →https://doi.org/10.1111/j.1438-8677.1997.tb00650.xopenalex-snapshot

The Pollinators of the Malagasy Star OrchidsAngraecum sesquipedale, A. sororiumandA. compactumand the Evolution of Extremely Long Spurs by Pollinator Shift

inferredcites →https://doi.org/10.1111/j.1558-5646.2008.00549.xopenalex-snapshot

IS A NEW AND GENERAL THEORY OF MOLECULAR SYSTEMATICS EMERGING?

inferredcites →https://doi.org/10.1111/syen.12301openalex-snapshot

Museum specimens provide phylogenomic data to resolve relationships of sack‐bearer moths ( L epidoptera, M imallonoidea, M imallonidae)

inferredcites →https://doi.org/10.1111/syen.12337openalex-snapshot

Phylogenetic relationships among Bombycidae s.l. (Lepidoptera) based on analyses of complete mitochondrial genomes

inferredcites →https://doi.org/10.1126/sciadv.aar7428openalex-snapshot

The evolution of anti-bat sensory illusions in moths

inferredcites →https://doi.org/10.1126/science.1102210openalex-snapshot

A Draft Sequence for the Genome of the Domesticated Silkworm ( Bombyx mori )

inferredcites →https://doi.org/10.1126/science.1105113openalex-snapshot

A Molecular Phylogeny for Bats Illuminates Biogeography and the Fossil Record

inferredcites →https://doi.org/10.1126/science.1257570openalex-snapshot

Phylogenomics resolves the timing and pattern of insect evolution

inferredcites →https://doi.org/10.1126/science.264.5165.1590openalex-snapshot

Shifts in Diversification Rate with the Origin of Angiosperms

inferredcites →https://doi.org/10.1163/187631291x00327openalex-snapshot

Tentative reconstruction of the ditrysian phylogeny (Lepidoptera: Glossata)

inferredcites →https://doi.org/10.1163/187631294x00045openalex-snapshot

The Bombycoidea: Phylogeny and higher classification (Lepidoptera: Glossata)

inferredcites →https://doi.org/10.11646/zootaxa.3286.1.1openalex-snapshot

An annotated catalog of fossil and subfossil Lepidoptera (Insecta: Holometabola) of the world

inferredcites →https://doi.org/10.11646/zootaxa.4270.1.1openalex-snapshot

Fossil butterflies, calibration points and the molecular clock (Lepidoptera: Papilionoidea)

inferredcites →https://doi.org/10.1186/1471-2148-11-152openalex-snapshot

PhyDesign: an online application for profiling phylogenetic informativeness

inferredcites →https://doi.org/10.1186/1471-2148-9-280openalex-snapshot

Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study

inferredcites →https://doi.org/10.1186/s12862-018-1216-zopenalex-snapshot

Anchored phylogenomics illuminates the skipper butterfly tree of life

inferredcites →https://doi.org/10.1186/s12983-014-0081-xopenalex-snapshot

FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies

inferredcites →https://doi.org/10.1201/9781420060201-c1openalex-snapshot

Evolutionary Framework for Lepidoptera Model Systems

inferredcites →https://doi.org/10.1371/journal.pone.0005719openalex-snapshot

Phylogeny and Biogeography of Hawkmoths (Lepidoptera: Sphingidae): Evidence from Five Nuclear Genes

inferredcites →https://doi.org/10.1371/journal.pone.0058568openalex-snapshot

A Large-Scale, Higher-Level, Molecular Phylogenetic Study of the Insect Order Lepidoptera (Moths and Butterflies)

inferredcites →https://doi.org/10.1371/journal.pone.0089543openalex-snapshot

Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees

inferredcites →https://doi.org/10.1371/journal.pone.0161531openalex-snapshot

Sequence Capture and Phylogenetic Utility of Genomic Ultraconserved Elements Obtained from Pinned Insect Specimens

inferredcites →https://doi.org/10.1515/9783110804744.321openalex-snapshot

18. The Bombycoidea and their Relatives

inferredcites →https://doi.org/10.2307/2388706openalex-snapshot

A Tropical Hawkmoth Community: Costa Rican Dry Forest Sphingidae

inferredcites →https://doi.org/10.2307/3545946openalex-snapshot

Capital Breeders and Income Breeders among Lepidoptera: Consequences to Population Dynamics

inferredcites →https://doi.org/10.32614/cran.package.ipsopenalex-snapshot

ips: Interfaces to Phylogenetic Software in R

inferredcites →https://doi.org/10.3897/bdj.6.e22236openalex-snapshot

A global checklist of the Bombycoidea (Insecta: Lepidoptera)

inferredcites →https://doi.org/10.5642/aliso.19630503.12openalex-snapshot

Hawkmoth Pollination in the Genus Oenothera

inferredcites →https://doi.org/10.7717/peerj.2160openalex-snapshot

Preserving and vouchering butterflies and moths for large-scale museum-based molecular research

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1101/2023.05.28.542320openalex-snapshot

The developmental gene disco regulates diel-niche evolution in adult moths

inferred← citeshttps://doi.org/10.14411/eje.2022.035openalex-snapshot

Mitochondrial genomes of two wild silkmoths, Samia watsoni and Samia wangi (Lepidoptera: Saturniidae), and their phylogenetic implications

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