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Short Tandem Repeats Information in TCGA is Statistically Biased by Amplification

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s10549-014-2908-8openalex-snapshot
Microsatellite genotyping reveals a signature in breast cancer exomes
inferredcites →https://doi.org/10.1016/j.ajhg.2017.06.005openalex-snapshot
10 Years of GWAS Discovery: Biology, Function, and Translation
inferredcites →https://doi.org/10.1038/35057062openalex-snapshot
Initial sequencing and analysis of the human genome
inferredcites →https://doi.org/10.1038/nature15393openalex-snapshot
A global reference for human genetic variation
inferredcites →https://doi.org/10.1038/nm.4191openalex-snapshot
Classification and characterization of microsatellite instability across 18 cancer types
inferredcites →https://doi.org/10.1038/nrg1521openalex-snapshot
Genome-wide association studies for common diseases and complex traits
inferredcites →https://doi.org/10.1038/nrm1583openalex-snapshot
Friendly rivalry
inferredcites →https://doi.org/10.1038/s41588-018-0183-zopenalex-snapshot
Genome-wide polygenic scores for common diseases identify individuals with risk equivalent to monogenic mutations
inferredcites →https://doi.org/10.1038/s41591-018-0190-8openalex-snapshot
Bringing polygenic risk scores to the clinic
inferredcites →https://doi.org/10.1038/s41591-018-0191-7openalex-snapshot
An option for treatment of multidrug-resistant HIV
inferredcites →https://doi.org/10.1038/sj.onc.1206852openalex-snapshot
Association of a functional tandem repeats in the downstream of human telomerase gene and lung cancer
inferredcites →https://doi.org/10.1089/10665270252935557openalex-snapshot
Zinc Finger Gene Clusters and Tandem Gene Duplication
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/nar/27.2.573openalex-snapshot
Tandem repeats finder: a program to analyze DNA sequences
inferredcites →https://doi.org/10.1101/517839openalex-snapshot
Cancer Classification from Healthy DNA
inferredcites →https://doi.org/10.1126/science.1237758openalex-snapshot
Somatic Mutation, Genomic Variation, and Neurological Disease
inferredcites →https://doi.org/10.1186/s12864-015-1902-9openalex-snapshot
A survey of tandem repeat instabilities and associated gene expression changes in 35 colorectal cancers
inferredcites →https://doi.org/10.1371/journal.pmed.1001779openalex-snapshot
UK Biobank: An Open Access Resource for Identifying the Causes of a Wide Range of Complex Diseases of Middle and Old Age
inferredcites →https://doi.org/10.1371/journal.pone.0105585openalex-snapshot
A Quantitative Comparison of Single-Cell Whole Genome Amplification Methods

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1101/517839openalex-snapshot
Cancer Classification from Healthy DNA
inferred← citeshttps://doi.org/10.3390/genes14030762openalex-snapshot
Genetic Risk Scores and Missing Heritability in Ovarian Cancer
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