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AGO1 in association with NEAT1 lncRNA contributes to nuclear and 3D chromatin architecture in human cells
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1016/j.ceb.2012.01.008openalex-snapshot
Polycomb: a paradigm for genome organization from one to three dimensions
inferredcites →https://doi.org/10.1016/j.cell.2005.08.033openalex-snapshot
Regulating Gene Expression through RNA Nuclear Retention
inferredcites →https://doi.org/10.1016/j.cell.2011.08.054openalex-snapshot
ncRNA- and Pc2 Methylation-Dependent Gene Relocation between Nuclear Structures Mediates Gene Activation Programs
inferredcites →https://doi.org/10.1016/j.cell.2012.02.002openalex-snapshot
Spatial Organization of the Mouse Genome and Its Role in Recurrent Chromosomal Translocations
inferredcites →https://doi.org/10.1016/j.cell.2013.04.053openalex-snapshot
Architectural Protein Subclasses Shape 3D Organization of Genomes during Lineage Commitment
inferredcites →https://doi.org/10.1016/j.cell.2013.09.024openalex-snapshot
ncRNA- and Pc2 Methylation-Dependent Gene Relocation between Nuclear Structures Mediates Gene Activation Programs
inferredcites →https://doi.org/10.1016/j.cell.2014.01.042openalex-snapshot
Stable C0T-1 Repeat RNA Is Abundant and Is Associated with Euchromatic Interphase Chromosomes
inferredcites →https://doi.org/10.1016/j.cell.2014.11.021openalex-snapshot
A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
inferredcites →https://doi.org/10.1016/j.cell.2017.09.001openalex-snapshot
Non-coding Transcription Instructs Chromatin Folding and Compartmentalization to Dictate Enhancer-Promoter Communication and T Cell Fate
inferredcites →https://doi.org/10.1016/j.cub.2008.07.072openalex-snapshot
Importance of Translation and Nonnucleolytic Ago Proteins for On-Target RNA Interference
inferredcites →https://doi.org/10.1016/j.molcel.2004.07.007openalex-snapshot
Human Argonaute2 Mediates RNA Cleavage Targeted by miRNAs and siRNAs
inferredcites →https://doi.org/10.1016/j.molcel.2009.01.026openalex-snapshot
An Architectural Role for a Nuclear Noncoding RNA: NEAT1 RNA Is Essential for the Structure of Paraspeckles
inferredcites →https://doi.org/10.1016/j.molcel.2014.01.009openalex-snapshot
Long Noncoding RNA NEAT1-Dependent SFPQ Relocation from Promoter Region to Paraspeckle Mediates IL8 Expression upon Immune Stimuli
inferredcites →https://doi.org/10.1016/j.molcel.2014.07.012openalex-snapshot
The Long Noncoding RNAs NEAT1 and MALAT1 Bind Active Chromatin Sites
inferredcites →https://doi.org/10.1016/j.molcel.2018.05.019openalex-snapshot
Functional Domains of NEAT1 Architectural lncRNA Induce Paraspeckle Assembly through Phase Separation
inferredcites →https://doi.org/10.1016/j.ymeth.2012.05.001openalex-snapshot
Hi–C: A comprehensive technique to capture the conformation of genomes
inferredcites →https://doi.org/10.1038/emboj.2012.251openalex-snapshot
Alternative 3′‐end processing of long noncoding RNA initiates construction of nuclear paraspeckles
inferredcites →https://doi.org/10.1038/emboj.2013.237openalex-snapshot
Cohesin‐mediated interactions organize chromosomal domain architecture
inferredcites →https://doi.org/10.1038/nature09380openalex-snapshot
Mediator and cohesin connect gene expression and chromatin architecture
inferredcites →https://doi.org/10.1038/nature10492openalex-snapshot
Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila
inferredcites →https://doi.org/10.1038/nature11049openalex-snapshot
Spatial partitioning of the regulatory landscape of the X-inactivation centre
inferredcites →https://doi.org/10.1038/nature11082openalex-snapshot
Topological domains in mammalian genomes identified by analysis of chromatin interactions
inferredcites →https://doi.org/10.1038/ncb2140openalex-snapshot
Direct visualization of the co-transcriptional assembly of a nuclear body by noncoding RNAs
inferredcites →https://doi.org/10.1038/ncomms6383openalex-snapshot
The oestrogen receptor alpha-regulated lncRNA NEAT1 is a critical modulator of prostate cancer
inferredcites →https://doi.org/10.1038/nprot.2012.005openalex-snapshot
5′ end–centered expression profiling using cap-analysis gene expression and next-generation sequencing
inferredcites →https://doi.org/10.1038/nrg3462openalex-snapshot
Argonaute proteins: functional insights and emerging roles
inferredcites →https://doi.org/10.1038/nsmb.2373openalex-snapshot
Argonaute proteins couple chromatin silencing to alternative splicing
inferredcites →https://doi.org/10.1038/nsmb.2764openalex-snapshot
Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre
inferredcites →https://doi.org/10.1038/s41598-017-07539-4openalex-snapshot
Reactivity of human AGO2 monoclonal antibody 11A9 with the SWI/SNF complex: A case study for rigorously defining antibody selectivity
inferredcites →https://doi.org/10.1038/srep12855openalex-snapshot
Reduced Expression of Argonaute 1, Argonaute 2 and TRBP Changes Levels and Intracellular Distribution of RNAi Factors
inferredcites →https://doi.org/10.1073/pnas.0807899106openalex-snapshot
MENε/β noncoding RNAs are essential for structural integrity of nuclear paraspeckles
inferredcites →https://doi.org/10.1073/pnas.1317788111openalex-snapshot
Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells
inferredcites →https://doi.org/10.1073/pnas.1416858111openalex-snapshot
Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cells
inferredcites →https://doi.org/10.1073/pnas.1423819112openalex-snapshot
SWI/SNF chromatin-remodeling complexes function in noncoding RNA-dependent assembly of nuclear bodies
inferredcites →https://doi.org/10.1073/pnas.86.1.177openalex-snapshot
Chromatin architecture and nuclear RNA.
inferredcites →https://doi.org/10.1091/mbc.e04-03-0253openalex-snapshot
Proteomic Analysis of Interchromatin Granule Clusters
inferredcites →https://doi.org/10.1091/mbc.e13-09-0558openalex-snapshot
NEAT1 long noncoding RNA regulates transcription via protein sequestration within subnuclear bodies
inferredcites →https://doi.org/10.1093/nar/gku1387openalex-snapshot
ARGONAUTE2 cooperates with SWI/SNF complex to determine nucleosome occupancy at human Transcription Start Sites
inferredcites →https://doi.org/10.1093/nar/gkx916openalex-snapshot
Human Argonaute3 has slicer activity
inferredcites →https://doi.org/10.1101/036764openalex-snapshot
Structural features of the fly chromatin colors revealed by automatic three-dimensional modeling
inferredcites →https://doi.org/10.1101/cshperspect.a003772openalex-snapshot
Ancestral Roles of Small RNAs: An Ago-Centric Perspective
inferredcites →https://doi.org/10.1101/gad.16651211openalex-snapshot
RNAi-independent role for Argonaute2 in CTCF/CP190 chromatin insulator function
inferredcites →https://doi.org/10.1101/gr.087775.108openalex-snapshot
MEN ε/β nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles
inferredcites →https://doi.org/10.1101/gr.161620.113openalex-snapshot
Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments
inferredcites →https://doi.org/10.1101/gr.185272.114openalex-snapshot
The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements
inferredcites →https://doi.org/10.1101/gr.201517.115openalex-snapshot
Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations
inferredcites →https://doi.org/10.1101/pdb.prot5559openalex-snapshot
NanoCAGE: A High-Resolution Technique to Discover and Interrogate Cell Transcriptomes
inferredcites →https://doi.org/10.1101/sqb.2016.81.031013openalex-snapshot
Alterations in Three-Dimensional Organization of the Cancer Genome and Epigenome
inferredcites →https://doi.org/10.1126/science.1074973openalex-snapshot
Regulation of Heterochromatic Silencing and Histone H3 Lysine-9 Methylation by RNAi
inferredcites →https://doi.org/10.1126/science.1079695openalex-snapshot
ARGONAUTE4 Control of Locus-Specific siRNA Accumulation and DNA and Histone Methylation
inferredcites →https://doi.org/10.1126/science.1181369openalex-snapshot
Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
inferredcites →https://doi.org/10.1126/science.177.4043.72openalex-snapshot
Chromosomal RNA: Its Properties
inferredcites →https://doi.org/10.1146/annurev-biochem-051410-092902openalex-snapshot
Genome Regulation by Long Noncoding RNAs
inferredcites →https://doi.org/10.1186/s12859-015-0683-0openalex-snapshot
diffHic: a Bioconductor package to detect differential genomic interactions in Hi-C data
inferredcites →https://doi.org/10.1186/s12915-015-0141-5openalex-snapshot
A chromatin code for alternative splicing involving a putative association between CTCF and HP1α proteins
inferredcites →https://doi.org/10.1186/s12957-016-0799-3openalex-snapshot
Enhanced expression of long non-coding RNA NEAT1 is associated with the progression of gastric adenocarcinomas
inferredcites →https://doi.org/10.1186/s13059-015-0730-1openalex-snapshot
Getting the genome in shape: the formation of loops, domains and compartments
inferredcites →https://doi.org/10.1186/s13059-015-0733-yopenalex-snapshot
Xist localization and function: new insights from multiple levels
inferredcites →https://doi.org/10.1186/s13059-015-0768-0openalex-snapshot
Chromatin interaction analysis reveals changes in small chromosome and telomere clustering between epithelial and breast cancer cells
inferredcites →https://doi.org/10.1186/s13059-015-0831-xopenalex-snapshot
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
inferredcites →https://doi.org/10.1371/journal.pgen.1003821openalex-snapshot
Ago1 Interacts with RNA Polymerase II and Binds to the Promoters of Actively Transcribed Genes in Human Cancer Cells
inferredcites →https://doi.org/10.15252/embj.201695848openalex-snapshot
Unusual semi‐extractability as a hallmark of nuclear body‐associated architectural noncoding RNAs
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1016/j.intimp.2024.112063openalex-snapshot
An extensive overview of the role of lncRNAs generated from immune cells in the etiology of cancer
inferred← citeshttps://doi.org/10.1038/s41598-019-46841-1openalex-snapshot
Changes in nuclear and cytoplasmic microRNA distribution in response to hypoxic stress
inferred← citeshttps://doi.org/10.1101/574582openalex-snapshot
The lncRNA NEAT1_1 is dispensable for normal tissue homeostasis and cancer cell growth
inferred← citeshttps://doi.org/10.1261/rna.071456.119openalex-snapshot
The long noncoding RNA NEAT1_1 is seemingly dispensable for normal tissue homeostasis and cancer cell growth
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