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The complete mitochondrial genome of the Golden Birdwing butterfly Troides aeacus : insights into phylogeny and divergence times of the superfamily Papilionoidea

https://doi.org/10.1101/529347
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Drosophila mitochondrial DNA: Conserved sequences in the A+T-rich region and supporting evidence for a secondary structure model of the small ribosomal RNA
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Compositional Bias May Affect Both DNA-Based and Protein-Based Phylogenetic Reconstructions
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On the conservation biology of a Chinese population of the birdwing Troides aeacus (Lepidoptera: Papilionidae)
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The Mitochondrial Genome
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The mitochondrial genome of the smaller tea tortrix Adoxophyes honmai (Lepidoptera: Tortricidae)
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The position of the Hymenoptera within the Holometabola as inferred from the mitochondrial genome of Perga condei (Hymenoptera: Symphyta: Pergidae)
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Mitogenomics: digging deeper with complete mitochondrial genomes
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The complete sequence of the mitochondrial genome of Daphnia pulex (Cladocera: Crustacea)
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Mitochondrial protein phylogeny joins myriapods with chelicerates
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The mitochondrial genome of the primary screwworm fly Cochliomyia hominivorax (Diptera: Calliphoridae)
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The complete nucleotide sequence of the mitochondrial genome of the cabbage butterfly, Artogeia melete (Lepidoptera: Pieridae)
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inferredcites →https://doi.org/10.1093/molbev/msw054openalex-snapshot
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Numerous Gene Rearrangements in the Mitochondrial Genome of the Wallaby Louse, Heterodoxus macropus (Phthiraptera)
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a004200openalex-snapshot
Significant Levels of Sequence Divergence and Gene Rearrangements have Occurred Between the Mitochondrial Genomes of the Wild Mulberry Silkmoth, Bombyx mandarina, and its Close Relative, the Domesticated Silkmoth, Bombyx mori
inferredcites →https://doi.org/10.1093/sysbio/syr079openalex-snapshot
Can Deliberately Incomplete Gene Sample Augmentation Improve a Phylogeny Estimate for the Advanced Moths and Butterflies (Hexapoda: Lepidoptera)?
inferredcites →https://doi.org/10.1098/rspb.2009.1303openalex-snapshot
Nymphalid butterflies diversify following near demise at the Cretaceous/Tertiary boundary
inferredcites →https://doi.org/10.1098/rspb.2010.0392openalex-snapshot
Comprehensive gene and taxon coverage elucidates radiation patterns in moths and butterflies
inferredcites →https://doi.org/10.1098/rspb.2011.1430openalex-snapshot
Cretaceous origin and repeated tertiary diversification of the redefined butterflies
inferredcites →https://doi.org/10.1098/rspb.2014.0970openalex-snapshot
Phylogenomics provides strong evidence for relationships of butterflies and moths
inferredcites →https://doi.org/10.1111/j.1096-0031.2010.00326.xopenalex-snapshot
Phylogenetics and divergence times of Papilioninae (Lepidoptera) with special reference to the enigmatic genera Teinopalpus and Meandrusa
inferredcites →https://doi.org/10.1111/j.1365-2583.2006.00630.xopenalex-snapshot
The mitochondrial genome of the Korean hairstreak, Coreana raphaelis (Lepidoptera: Lycaenidae)
inferredcites →https://doi.org/10.1111/j.1365-2699.2012.02787.xopenalex-snapshot
Global biogeographical pattern of swallowtail diversification demonstrates alternative colonization routes in the Northern and Southern hemispheres
inferredcites →https://doi.org/10.1126/science.1078607openalex-snapshot
Hexapod Origins: Monophyletic or Paraphyletic?
inferredcites →https://doi.org/10.1126/science.1257570openalex-snapshot
Phylogenomics resolves the timing and pattern of insect evolution
inferredcites →https://doi.org/10.1139/g04-090openalex-snapshot
Insect mitochondrial genomics: the complete mitochondrial genome sequence of the meadow spittlebugPhilaenus spumarius(Hemiptera: Auchenorrhyncha: Cercopoidae)
inferredcites →https://doi.org/10.1146/annurev-earth-042711-105313openalex-snapshot
Molecular and Fossil Evidence on the Origin of Angiosperms
inferredcites →https://doi.org/10.1146/annurev-ento-120710-100538openalex-snapshot
Advances in Insect Phylogeny at the Dawn of the Postgenomic Era
inferredcites →https://doi.org/10.1146/annurev.es.18.110187.001413openalex-snapshot
EVOLUTION OF ANIMAL MITOCHONDRIAL DNA: RELEVANCE FOR POPULATION BIOLOGY AND SYSTEMATICS
inferredcites →https://doi.org/10.1163/187631291x00327openalex-snapshot
Tentative reconstruction of the ditrysian phylogeny (Lepidoptera: Glossata)
inferredcites →https://doi.org/10.1163/187631296x00205openalex-snapshot
The higher classification of butterflies (Lepidoptera): problems and prospects
inferredcites →https://doi.org/10.1186/1471-2148-9-280openalex-snapshot
Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study
inferredcites →https://doi.org/10.1186/1471-2148-9-99openalex-snapshot
Impact of duplicate gene copies on phylogenetic analysis and divergence time estimates in butterflies
inferredcites →https://doi.org/10.1371/journal.pbio.0040088openalex-snapshot
Relaxed Phylogenetics and Dating with Confidence
inferredcites →https://doi.org/10.1371/journal.pcbi.1003537openalex-snapshot
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inferredcites →https://doi.org/10.1371/journal.pone.0058568openalex-snapshot
A Large-Scale, Higher-Level, Molecular Phylogenetic Study of the Insect Order Lepidoptera (Moths and Butterflies)
inferredcites →https://doi.org/10.1371/journal.pone.0080875openalex-snapshot
Timing and Patterns in the Taxonomic Diversification of Lepidoptera (Butterflies and Moths)
inferredcites →https://doi.org/10.14601/phytopathol_mediterr-14998u1.29openalex-snapshot
BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT
inferredcites →https://doi.org/10.1515/9783110804744.7openalex-snapshot
2. Phylogeny and Palaeontology
inferredcites →https://doi.org/10.1603/an10066openalex-snapshot
Genetic Differentiation of Troides Aeacus Formosanus (Lepidoptera: Papilionidae), Based on Cytochrome Oxidase I Sequences and Amplified Fragment Length Polymorphism
inferredcites →https://doi.org/10.5860/choice.32-5073openalex-snapshot
Swallowtail butterflies of the Americas: a study in biological dynamics, ecological diversity, biosystematics, and conservation
inferredcites →https://doi.org/10.5860/choice.41-2175openalex-snapshot
Butterflies: ecology and evolution taking flight
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