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VSIM: Visualization and simulation of variants in personal genomes with an application to premarital testing

https://doi.org/10.1101/529461
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/mgg3.262openalex-snapshot
A comprehensive global genotype–phenotype database for rare diseases
inferredcites →https://doi.org/10.1016/j.ejmhg.2017.01.002openalex-snapshot
Global distribution of consanguinity and their impact on complex diseases: Genetic disorders from an endogamous population
inferredcites →https://doi.org/10.1016/j.jiph.2009.01.005openalex-snapshot
Premarital HIV screening in Saudi Arabia, is antenatal next?
inferredcites →https://doi.org/10.1016/j.jiph.2010.11.001openalex-snapshot
An educational program about premarital screening for unmarried female students in King Abdul-Aziz University, Jeddah
inferredcites →https://doi.org/10.1016/j.jiph.2012.05.001openalex-snapshot
Premarital Screening and Genetic Counseling program: Knowledge, attitude, and satisfaction of attendees of governmental outpatient clinics in Jeddah
inferredcites →https://doi.org/10.1016/j.psc.2010.11.005openalex-snapshot
Genomics for Disease Treatment and Prevention
inferredcites →https://doi.org/10.1023/a:1014567800950openalex-snapshot
Consanguinity and advanced maternal age as risk factors for reproductive losses in Alexandria, Egypt
inferredcites →https://doi.org/10.1038/clpt.2012.96openalex-snapshot
Pharmacogenomics Knowledge for Personalized Medicine
inferredcites →https://doi.org/10.1038/ncomms14994openalex-snapshot
Refined genetic maps reveal sexual dimorphism in human meiotic recombination at multiple scales
inferredcites →https://doi.org/10.1038/ng.2892openalex-snapshot
A general framework for estimating the relative pathogenicity of human genetic variants
inferredcites →https://doi.org/10.1038/ng.3703openalex-snapshot
M-CAP eliminates a majority of variants of uncertain significance in clinical exomes at high sensitivity
inferredcites →https://doi.org/10.1038/nmeth0410-248openalex-snapshot
A method and server for predicting damaging missense mutations
inferredcites →https://doi.org/10.1038/nrg754openalex-snapshot
Genetic counselling and customary consanguineous marriage
inferredcites →https://doi.org/10.1080/030144600282208openalex-snapshot
Short Report: A study of consanguinity in the Sultanate of Oman
inferredcites →https://doi.org/10.1093/bib/bby019openalex-snapshot
Interactive and coordinated visualization approaches for biological data analysis
inferredcites →https://doi.org/10.1093/bioinformatics/btr330openalex-snapshot
The variant call format and VCFtools
inferredcites →https://doi.org/10.1093/nar/gkg509openalex-snapshot
SIFT: predicting amino acid changes that affect protein function
inferredcites →https://doi.org/10.1093/nar/gkt1113openalex-snapshot
ClinVar: public archive of relationships among sequence variation and human phenotype
inferredcites →https://doi.org/10.1093/nar/gkv1068openalex-snapshot
DIDA: A curated and annotated digenic diseases database
inferredcites →https://doi.org/10.1093/nar/gkw1133openalex-snapshot
The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog)
inferredcites →https://doi.org/10.1101/023754openalex-snapshot
Comparing Variant Call Files for Performance Benchmarking of Next-Generation Sequencing Variant Calling Pipelines
inferredcites →https://doi.org/10.1111/j.1365-3016.2006.00750.xopenalex-snapshot
Consanguineous unions and child health in the State of Qatar
inferredcites →https://doi.org/10.1126/science.286.5443.1351openalex-snapshot
A Genetic Map and Recombination Parameters of the Human Malaria Parasite Plasmodium falciparum
inferredcites →https://doi.org/10.1136/jmedgenet-2013-101713openalex-snapshot
Digenic inheritance in medical genetics
inferredcites →https://doi.org/10.1159/000010045openalex-snapshot
Increased Intraepithelial Innervation in Women with Vulvar Vestibulitis Syndrome
inferredcites →https://doi.org/10.1159/000102147openalex-snapshot
Consanguineous Marriages and Their Effects on Common Adult Diseases: Studies from an Endogamous Population
inferredcites →https://doi.org/10.1159/000154362openalex-snapshot
Consanguinity and Associated Socio-Demographic Factors in the United Arab Emirates
inferredcites →https://doi.org/10.12688/f1000research.9762.1openalex-snapshot
Viewing RNA-seq data on the entire human genome
inferredcites →https://doi.org/10.31887/dcns.2016.18.3/jkrieropenalex-snapshot
Genomic sequencing in clinical practice: applications, challenges, and opportunities
inferredcites →https://doi.org/10.4103/0256-4947.51726openalex-snapshot
Consanguinity and major genetic disorders in Saudi children : A community-based cross-sectional study
inferredcites →https://doi.org/10.4103/0256-4947.81527openalex-snapshot
Six-Year Outcome of the National Premarital Screening and Genetic Counseling Program for Sickle Cell Disease and β-Thalassemia in Saudi Arabia
inferredcites →https://doi.org/10.5144/0256-4947.2008.169openalex-snapshot
Consanguinity and major genetic disorders in Saudi children: a community-based cross-sectional study

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inferred← citeshttps://doi.org/10.1109/iccceee49695.2021.9429658openalex-snapshot
Designing a Simulation Model to Examine The Genetic Impact of Inbreeding In a Sudanese Population
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