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Interspecies bacterial competition determines community assembly in the C. elegans intestine
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/emmm.201100972openalex-snapshot
Worms need microbes too: microbiota, health and aging in Caenorhabditis elegans
inferredcites →https://doi.org/10.1016/j.cell.2006.02.017openalex-snapshot
Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine
inferredcites →https://doi.org/10.1016/j.cell.2006.08.043openalex-snapshot
Reciprocal Gut Microbiota Transplants from Zebrafish and Mice to Germ-free Recipients Reveal Host Habitat Selection
inferredcites →https://doi.org/10.1016/j.cell.2014.05.041openalex-snapshot
Cheese Rind Communities Provide Tractable Systems for In Situ and In Vitro Studies of Microbial Diversity
inferredcites →https://doi.org/10.1016/j.cois.2018.02.012openalex-snapshot
The role of the gut microbiome in health and disease of adult honey bee workers
inferredcites →https://doi.org/10.1016/j.cub.2012.08.005openalex-snapshot
Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species
inferredcites →https://doi.org/10.1016/j.cub.2017.05.034openalex-snapshot
Probabilistic Invasion Underlies Natural Gut Microbiome Stability
inferredcites →https://doi.org/10.1016/j.tim.2005.01.003openalex-snapshot
The worm has turned – microbial virulence modeled in Caenorhabditis elegans
inferredcites →https://doi.org/10.1016/j.tim.2006.06.009openalex-snapshot
Leeches and their microbiota: naturally simple symbiosis models
inferredcites →https://doi.org/10.1016/s0960-9822(00)00830-7openalex-snapshot
Salmonella typhimurium proliferates and establishes a persistent infection in the intestine of Caenorhabditis elegans
inferredcites →https://doi.org/10.1016/s0960-9822(00)00867-8openalex-snapshot
A novel bacterial pathogen, Microbacterium nematophilum, induces morphological change in the nematode C. elegans
inferredcites →https://doi.org/10.1016/s1369-5274(02)00293-xopenalex-snapshot
Caenorhabditis elegans as a host for the study of host–pathogen interactions
inferredcites →https://doi.org/10.1021/nn401856uopenalex-snapshot
Mapping the Pharyngeal and Intestinal pH of Caenorhabditis elegans and Real-Time Luminal pH Oscillations Using Extended Dynamic Range pH-Sensitive Nanosensors
inferredcites →https://doi.org/10.1038/380240a0openalex-snapshot
The rock–paper–scissors game and the evolution of alternative male strategies
inferredcites →https://doi.org/10.1038/ismej.2011.38openalex-snapshot
Evidence for a core gut microbiota in the zebrafish
inferredcites →https://doi.org/10.1038/ismej.2013.86openalex-snapshot
The inconstant gut microbiota of Drosophila species revealed by 16S rRNA gene analysis
inferredcites →https://doi.org/10.1038/ismej.2015.253openalex-snapshot
Assembly of the Caenorhabditis elegans gut microbiota from diverse soil microbial environments
inferredcites →https://doi.org/10.1038/nature00823openalex-snapshot
Local dispersal promotes biodiversity in a real-life game of rock–paper–scissors
inferredcites →https://doi.org/10.1038/nature04216openalex-snapshot
Pathogenic bacteria induce aversive olfactory learning in Caenorhabditis elegans
inferredcites →https://doi.org/10.1038/nature06245openalex-snapshot
An ecological and evolutionary perspective on human–microbe mutualism and disease
inferredcites →https://doi.org/10.1038/nature10213openalex-snapshot
Human nutrition, the gut microbiome and the immune system
inferredcites →https://doi.org/10.1038/nature11234openalex-snapshot
Structure, function and diversity of the healthy human microbiome
inferredcites →https://doi.org/10.1038/nature12506openalex-snapshot
Richness of human gut microbiome correlates with metabolic markers
inferredcites →https://doi.org/10.1038/nature22898openalex-snapshot
Beyond pairwise mechanisms of species coexistence in complex communities
inferredcites →https://doi.org/10.1038/ncomms11965openalex-snapshot
Microbial interactions lead to rapid micro-scale successions on model marine particles
inferredcites →https://doi.org/10.1038/nri2689openalex-snapshot
Evolution of host innate defence: insights from Caenorhabditis elegans and primitive invertebrates
inferredcites →https://doi.org/10.1038/nrmicro2259openalex-snapshot
Bacterial competition: surviving and thriving in the microbial jungle
inferredcites →https://doi.org/10.1038/s41559-017-0109openalex-snapshot
Community structure follows simple assembly rules in microbial microcosms
inferredcites →https://doi.org/10.1038/s41559-018-0535-1openalex-snapshot
Ecological suicide in microbes
inferredcites →https://doi.org/10.1038/s41586-018-0386-6openalex-snapshot
Structure and function of the global topsoil microbiome
inferredcites →https://doi.org/10.1053/j.gastro.2011.04.052openalex-snapshot
The Intestinal Microbiota Affect Central Levels of Brain-Derived Neurotropic Factor and Behavior in Mice
inferredcites →https://doi.org/10.1073/pnas.0507535103openalex-snapshot
The diversity and biogeography of soil bacterial communities
inferredcites →https://doi.org/10.1073/pnas.0610281104openalex-snapshot
Detection and avoidance of a natural product from the pathogenic bacterium Serratia marcescens by Caenorhabditis elegans
inferredcites →https://doi.org/10.1073/pnas.0805048105openalex-snapshot
Prokaryote–eukaryote interactions identified by using Caenorhabditis elegans
inferredcites →https://doi.org/10.1073/pnas.0904036106openalex-snapshot
Two size-selective mechanisms specifically trap bacteria-sized food particles in Caenorhabditis elegans
inferredcites →https://doi.org/10.1073/pnas.1218525110openalex-snapshot
Animals in a bacterial world, a new imperative for the life sciences
inferredcites →https://doi.org/10.1073/pnas.1522149113openalex-snapshot
Biogeography of a human oral microbiome at the micron scale
inferredcites →https://doi.org/10.1073/pnas.1601306113openalex-snapshot
Effect of flow and peristaltic mixing on bacterial growth in a gut-like channel
inferredcites →https://doi.org/10.1073/pnas.1607183113openalex-snapshot
Caenorhabditis elegans responses to bacteria from its natural habitats
inferredcites →https://doi.org/10.1073/pnas.1803880115openalex-snapshot
Glyphosate perturbs the gut microbiota of honey bees
inferredcites →https://doi.org/10.1080/19490976.2015.1047129openalex-snapshot
Evolution of host specialization in gut microbes: the bee gut as a model
inferredcites →https://doi.org/10.1093/bioinformatics/btm404openalex-snapshot
Clustal W and Clustal X version 2.0
inferredcites →https://doi.org/10.1093/emboj/cdg159openalex-snapshot
Virulence factors of the human opportunistic pathogen Serratia marcescens identified by in vivo screening
inferredcites →https://doi.org/10.1093/genetics/124.4.855openalex-snapshot
Genetic analysis of defecation in Caenorhabditis elegans.
inferredcites →https://doi.org/10.1093/molbev/msx149openalex-snapshot
SMS: Smart Model Selection in PhyML
inferredcites →https://doi.org/10.1098/rstb.1976.0085openalex-snapshot
The pharynx of Caenorhabditis elegans
inferredcites →https://doi.org/10.1101/175737openalex-snapshot
Co-occurring soil bacteria exhibit a robust competitive hierarchy and lack of non-transitive interactions
inferredcites →https://doi.org/10.1111/1365-2745.12959openalex-snapshot
Intransitive competition is common across five major taxonomic groups and is driven by productivity, competitive rank and functional traits
inferredcites →https://doi.org/10.1111/1574-6976.12025openalex-snapshot
The gut microbiota of insects – diversity in structure and function
inferredcites →https://doi.org/10.1111/cmi.12152openalex-snapshot
Caenorhabditis elegansas a model for intracellular pathogen infection
inferredcites →https://doi.org/10.1111/jeb.13372openalex-snapshot
No measurable fitness cost to experimentally evolved host defence in the Caenorhabditis elegans–Serratia marcescens host–parasite system
inferredcites →https://doi.org/10.1126/science.1073759openalex-snapshot
A Conserved p38 MAP Kinase Pathway in Caenorhabditis elegans Innate Immunity
inferredcites →https://doi.org/10.1126/science.1223813openalex-snapshot
Host-Gut Microbiota Metabolic Interactions
inferredcites →https://doi.org/10.1126/science.aat1168openalex-snapshot
Emergent simplicity in microbial community assembly
inferredcites →https://doi.org/10.1128/aem.01442-15openalex-snapshot
The Host as the Driver of the Microbiota in the Gut and External Environment of Drosophila melanogaster
inferredcites →https://doi.org/10.1128/aem.02497-07openalex-snapshot
Coexistence of Antibiotic-Producing and Antibiotic-Sensitive Bacteria in Biofilms Is Mediated by Resistant Bacteria
inferredcites →https://doi.org/10.1128/aem.02742-13openalex-snapshot
Interspecies Interactions Determine the Impact of the Gut Microbiota on Nutrient Allocation in Drosophila melanogaster
inferredcites →https://doi.org/10.1128/iai.05522-11openalex-snapshot
Competition and Resilience between Founder and Introduced Bacteria in the Caenorhabditis elegans Gut
inferredcites →https://doi.org/10.1128/mbio.01117-13openalex-snapshot
Dual Role for Inflammasome Sensors NLRP1 and NLRP3 in Murine Resistance to Toxoplasma gondii
inferredcites →https://doi.org/10.1128/mbio.01117-14openalex-snapshot
Microbiota-Induced Changes in Drosophila melanogaster Host Gene Expression and Gut Morphology
inferredcites →https://doi.org/10.1128/mbio.01751-14openalex-snapshot
Spatial and Temporal Features of the Growth of a Bacterial Species Colonizing the Zebrafish Gut
inferredcites →https://doi.org/10.1128/mbio.02164-15openalex-snapshot
The Bee Microbiome: Impact on Bee Health and Model for Evolution and Ecology of Host-Microbe Interactions
inferredcites →https://doi.org/10.1128/msphere.00047-17openalex-snapshot
pH-Mediated Microbial and Metabolic Interactions in Fecal Enrichment Cultures
inferredcites →https://doi.org/10.1128/msystems.00161-17openalex-snapshot
Using Cultivated Microbial Communities To Dissect Microbiome Assembly: Challenges, Limitations, and the Path Ahead
inferredcites →https://doi.org/10.1146/annurev-ento-010814-020822openalex-snapshot
Multiorganismal Insects: Diversity and Function of Resident Microorganisms
inferredcites →https://doi.org/10.1152/ajpcell.00284.2009openalex-snapshot
Loss of the apical V-ATPase a-subunit VHA-6 prevents acidification of the intestinal lumen during a rhythmic behavior in C. elegans
inferredcites →https://doi.org/10.1186/s12866-016-0624-8openalex-snapshot
Caenorhabditis elegans susceptibility to gut Enterococcus faecalis infection is associated with fat metabolism and epithelial junction integrity
inferredcites →https://doi.org/10.1186/s12915-016-0258-1openalex-snapshot
The native microbiome of the nematode Caenorhabditis elegans: gateway to a new host-microbiome model
inferredcites →https://doi.org/10.1242/dmm.006684openalex-snapshot
C. elegans: model host and tool for antimicrobial drug discovery
inferredcites →https://doi.org/10.1242/jeb.00433openalex-snapshot
Food transport in the C. elegans pharynx
inferredcites →https://doi.org/10.1242/jeb.01955openalex-snapshot
Dietary choice behavior in Caenorhabditis elegans
inferredcites →https://doi.org/10.1371/journal.pbio.0050177openalex-snapshot
Development of the Human Infant Intestinal Microbiota
inferredcites →https://doi.org/10.1371/journal.pbio.1002226openalex-snapshot
Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes
inferredcites →https://doi.org/10.1371/journal.pbio.1002517openalex-snapshot
Host Gut Motility Promotes Competitive Exclusion within a Model Intestinal Microbiota
inferredcites →https://doi.org/10.1371/journal.pbio.1002533openalex-snapshot
Revised Estimates for the Number of Human and Bacteria Cells in the Body
inferredcites →https://doi.org/10.1371/journal.pbio.2000633openalex-snapshot
Stochastic assembly produces heterogeneous communities in the Caenorhabditis elegans intestine
inferredcites →https://doi.org/10.1371/journal.pbio.2004248openalex-snapshot
Modifying and reacting to the environmental pH can drive bacterial interactions
inferredcites →https://doi.org/10.1371/journal.pone.0126915openalex-snapshot
Malthusian Parameters as Estimators of the Fitness of Microbes: A Cautionary Tale about the Low Side of High Throughput
inferredcites →https://doi.org/10.1515/9781400889822openalex-snapshot
Fundamentals of Microbiome Science
inferredcites →https://doi.org/10.1534/genetics.115.176099openalex-snapshot
A Transparent Window into Biology: A Primer on Caenorhabditis elegans
inferredcites →https://doi.org/10.1534/genetics.116.195511openalex-snapshot
The Natural Biotic Environment of Caenorhabditis elegans
inferredcites →https://doi.org/10.3389/fmicb.2014.00151openalex-snapshot
Metagenomic analysis of the medicinal leech gut microbiota
inferredcites →https://doi.org/10.3389/fmicb.2014.00757openalex-snapshot
Characterization of shed medicinal leech mucus reveals a diverse microbiota
inferredcites →https://doi.org/10.3389/fmicb.2016.01475openalex-snapshot
Beyond 16S rRNA Community Profiling: Intra-Species Diversity in the Gut Microbiota
inferredcites →https://doi.org/10.3389/fmicb.2016.01569openalex-snapshot
Host Matters: Medicinal Leech Digestive-Tract Symbionts and Their Pathogenic Potential
inferredcites →https://doi.org/10.3389/fmicb.2017.00485openalex-snapshot
Caenorhabditis elegans as a Model for Microbiome Research
inferredcites →https://doi.org/10.3402/mehd.v26.26050openalex-snapshot
The composition of the gut microbiota throughout life, with an emphasis on early life
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1038/s41467-021-23247-0openalex-snapshot
Community composition of microbial microcosms follows simple assembly rules at evolutionary timescales
inferred← citeshttps://doi.org/10.1093/ismejo/wrag127openalex-snapshot
Host and microbial factors influence bacterial colonization of the honey bee gut
inferred← citeshttps://doi.org/10.1098/rspb.2020.2753openalex-snapshot
Priority effects alter interaction outcomes in a legume–rhizobium mutualism
inferred← citeshttps://doi.org/10.1101/2020.03.01.972349openalex-snapshot
Colonization with heterologous bacteria reprograms a Caenorhabditis elegans nutritional phenotype
inferred← citeshttps://doi.org/10.1101/2020.05.28.121855openalex-snapshot
Quantifying multi-species microbial interactions in the larval zebrafish gut
inferred← citeshttps://doi.org/10.1101/2020.06.26.174706openalex-snapshot
Host immunity alters successional ecology and stability of the microbiome in a C. elegans model
inferred← citeshttps://doi.org/10.1101/2020.11.20.392183openalex-snapshot
Host-associated rhizobia fitness: Dependence on nitrogen, density, community complexity, and legume genotype
inferred← citeshttps://doi.org/10.1111/1462-2920.14932openalex-snapshot
Community assembly of the native C . elegans microbiome is influenced by time, substrate and individual bacterial taxa
inferred← citeshttps://doi.org/10.1128/mbio.00807-20openalex-snapshot
Microbial Species Coexistence Depends on the Host Environment
inferred← citeshttps://doi.org/10.1128/mbio.01667-20openalex-snapshot
Higher-Order Interactions Dampen Pairwise Competition in the Zebrafish Gut Microbiome
inferred← citeshttps://doi.org/10.3390/life9010022openalex-snapshot
Bottom-Up Approaches to Synthetic Cooperation in Microbial Communities
inferred← citeshttps://doi.org/10.36987/jpbn.v10i1.5330openalex-snapshot
Vegetation Analysis of Tree and Pole Community as Part of Succession in Turgo Hill, Yogyakarta
inferred← citeshttps://doi.org/10.7554/elife.68583openalex-snapshot
Niche partitioning facilitates coexistence of closely related honey bee gut bacteria
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