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Unveiling the transcriptome complexity of the High- and Low- Zinc & Iron accumulating Indian wheat ( Triticum aestivum L.) cultivars

https://doi.org/10.1101/538819
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00122-014-2327-6openalex-snapshot
Zinc and iron concentration QTL mapped in a Triticum spelta × T. aestivum cross
inferredcites →https://doi.org/10.1007/s10142-016-0538-4openalex-snapshot
Genome-wide analysis of miRNAs and Tasi-RNAs in Zea mays in response to phosphate deficiency
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Toxicity and detoxification of heavy metals during plant growth and metabolism
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Enrichment of cereal grains with zinc: Agronomic or genetic biofortification?
inferredcites →https://doi.org/10.1007/s11104-016-3025-8openalex-snapshot
QTL mapping for grain zinc and iron concentrations and zinc efficiency in a tetraploid and hexaploid wheat mapping populations
inferredcites →https://doi.org/10.1007/s12298-008-0010-6openalex-snapshot
Wall associated kinases from plants — an overview
inferredcites →https://doi.org/10.1007/s12539-016-0178-3openalex-snapshot
Identification of Novel Abiotic Stress Proteins in Triticum aestivum Through Functional Annotation of Hypothetical Proteins
inferredcites →https://doi.org/10.1007/s13258-018-0705-1openalex-snapshot
Extrapolation of significant genes and transcriptional regulatory networks involved in Zea mays in response in UV-B stress
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Deciphering genome-wide WRKY gene family of Triticum aestivum L. and their functional role in response to Abiotic stress
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The role of calcium in plant signal transduction under macronutrient deficiency stress
inferredcites →https://doi.org/10.1016/b978-0-12-812104-7.00003-4openalex-snapshot
Molecular Bases of Iron Accumulation Towards the Development of Iron-Enriched Crops
inferredcites →https://doi.org/10.1016/b978-0-12-812689-9.00001-7openalex-snapshot
Advancement of Metabolomics Techniques and Their Applications in Plant Science
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Involvement of Mitogen-Activated Protein Kinases in Abiotic Stress Responses in Plants
inferredcites →https://doi.org/10.1016/b978-0-12-813066-7.00007-3openalex-snapshot
DNA Helicase-Mediated Abiotic Stress Tolerance in Plants
inferredcites →https://doi.org/10.1016/j.bbagrm.2011.09.002openalex-snapshot
The role of WRKY transcription factors in plant abiotic stresses
inferredcites →https://doi.org/10.1016/j.cj.2015.07.002openalex-snapshot
Genotypic variation for seed protein and mineral content among post-rainy season-grown sorghum genotypes
inferredcites →https://doi.org/10.1016/j.ecoenv.2018.02.057openalex-snapshot
The defensive role of silicon in wheat against stress conditions induced by drought, salinity or cadmium
inferredcites →https://doi.org/10.1016/j.jcs.2013.09.001openalex-snapshot
Biofortification strategies to increase grain zinc and iron concentrations in wheat
inferredcites →https://doi.org/10.1016/j.jcs.2016.03.006openalex-snapshot
Effect of drought and elevated temperature on grain zinc and iron concentrations in CIMMYT spring wheat
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Mineral concentrations in the embryo and seed coat of common bean cultivars
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Genome-wide expression analysis of rice ABC transporter family across spatio-temporal samples and in response to abiotic stresses
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Physiological functions of mineral micronutrients (Cu, Zn, Mn, Fe, Ni, Mo, B, Cl)
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Serine in plants: biosynthesis, metabolism, and functions
inferredcites →https://doi.org/10.1016/s0074-7742(04)59008-6openalex-snapshot
Mitogen-Activated Protein Kinase Signaling
inferredcites →https://doi.org/10.1016/s0378-1119(96)00327-7openalex-snapshot
Metabolic engineering: prospects for crop improvement through the genetic manipulation of phenylpropanoid biosynthesis and defense responses — a review
inferredcites →https://doi.org/10.1016/s1369-5266(98)80113-1openalex-snapshot
Phenylpropanoid biosynthesis and its regulation
inferredcites →https://doi.org/10.1016/s2214-109x(13)70001-9openalex-snapshot
Global, regional, and national trends in haemoglobin concentration and prevalence of total and severe anaemia in children and pregnant and non-pregnant women for 1995–2011: a systematic analysis of population-representative data
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Comparative Transcriptome Analysis between Low- and High-Cadmium-Accumulating Genotypes of Pakchoi (Brassica chinensis L.) in Response to Cadmium Stress
inferredcites →https://doi.org/10.1038/nbt.3122openalex-snapshot
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
inferredcites →https://doi.org/10.1038/nbt.3172openalex-snapshot
Ballgown bridges the gap between transcriptome assembly and expression analysis
inferredcites →https://doi.org/10.1038/srep28884openalex-snapshot
Wheat CBL-interacting protein kinase 25 negatively regulates salt tolerance in transgenic wheat
inferredcites →https://doi.org/10.1074/jbc.m511794200openalex-snapshot
Identification and Functional Characterization of the BAG Protein Family in Arabidopsis thaliana
inferredcites →https://doi.org/10.1093/aob/mcy047openalex-snapshot
The maize lilliputian1 (lil1) gene, encoding a brassinosteroid cytochrome P450 C-6 oxidase, is involved in plant growth and drought response
inferredcites →https://doi.org/10.1093/bioinformatics/bti610openalex-snapshot
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
inferredcites →https://doi.org/10.1093/bioinformatics/btp616openalex-snapshot
edgeR : a Bioconductor package for differential expression analysis of digital gene expression data
inferredcites →https://doi.org/10.1093/jxb/erp257openalex-snapshot
Wheat (Triticum aestivum) NAM proteins regulate the translocation of iron, zinc, and nitrogen compounds from vegetative tissues to grain
inferredcites →https://doi.org/10.1093/jxb/erp331openalex-snapshot
TaSnRK2.4, an SNF1-type serine/threonine protein kinase of wheat (Triticum aestivum L.), confers enhanced multistress tolerance in Arabidopsis
inferredcites →https://doi.org/10.1093/jxb/erq290openalex-snapshot
A novel chloroplast protein, CEST induces tolerance to multiple environmental stresses and reduces photooxidative damage in transgenic Arabidopsis
inferredcites →https://doi.org/10.1093/jxb/eru314openalex-snapshot
Phosphate and zinc transport and signalling in plants: toward a better understanding of their homeostasis interaction
inferredcites →https://doi.org/10.1093/jxb/ery053openalex-snapshot
Abiotic stress-induced chloroplast proteome remodelling: a mechanistic overview
inferredcites →https://doi.org/10.1093/mp/ssp106openalex-snapshot
Phenylpropanoid Biosynthesis
inferredcites →https://doi.org/10.1093/nq/11-7-271gopenalex-snapshot
IDENTIFICATION OF NOVEL
inferredcites →https://doi.org/10.1093/treephys/tpr106openalex-snapshot
Transcriptome analyses of Populus x euramericana clone I-214 leaves exposed to excess zinc
inferredcites →https://doi.org/10.1104/pp.105.066910openalex-snapshot
Involvement of a Cell Wall-Associated Kinase, WAKL4, in Arabidopsis Mineral Responses
inferredcites →https://doi.org/10.1104/pp.106.092965openalex-snapshot
Desiccation and Zinc Binding Induce Transition of Tomato Abscisic Acid Stress Ripening 1, a Water Stress- and Salt Stress-Regulated Plant-Specific Protein, from Unfolded to Folded State
inferredcites →https://doi.org/10.1109/bsb.2016.7552157openalex-snapshot
Embryo and endosperm specific comparative transcriptome analysis of triticum aestivum in response to ABA and H2O2 stress
inferredcites →https://doi.org/10.1111/ejss.12437openalex-snapshot
Agronomic biofortification of cereals with zinc: a review
inferredcites →https://doi.org/10.1111/nph.15140openalex-snapshot
Efficient and flexible uptake system for mineral elements in plants
inferredcites →https://doi.org/10.1111/ppl.12165openalex-snapshot
Regulation of potassium transport in plants under hostile conditions: implications for abiotic and biotic stress tolerance
inferredcites →https://doi.org/10.1136/pgmj.2006.047670openalex-snapshot
Micronutrients in health and disease
inferredcites →https://doi.org/10.1177/15648265110321s105openalex-snapshot
Biofortification: A New Tool to Reduce Micronutrient Malnutrition
inferredcites →https://doi.org/10.1186/gb-2013-14-4-r36openalex-snapshot
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
inferredcites →https://doi.org/10.1186/s12870-018-1278-5openalex-snapshot
Transcriptomic analysis reveals vacuolar Na+ (K+)/H+ antiporter gene contributing to growth, development, and defense in switchgrass (Panicum virgatum L.)
inferredcites →https://doi.org/10.1201/b22338-3openalex-snapshot
Signal Transduction in Plants with Response to Heavy Metals Toxicity: An Overview
inferredcites →https://doi.org/10.1371/journal.pone.0030619openalex-snapshot
NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data
inferredcites →https://doi.org/10.1371/journal.pone.0064643openalex-snapshot
Transcriptomic Analysis of Cadmium Stress Response in the Heavy Metal Hyperaccumulator Sedum alfredii Hance
inferredcites →https://doi.org/10.1371/journal.pone.0111718openalex-snapshot
Comparative Transcriptional Profiling of Two Wheat Genotypes, with Contrasting Levels of Minerals in Grains, Shows Expression Differences during Grain Filling
inferredcites →https://doi.org/10.1371/journal.pone.0136630openalex-snapshot
Extrapolation of Inter Domain Communications and Substrate Binding Cavity of Camel HSP70 1A: A Molecular Modeling and Dynamics Simulation Study
inferredcites →https://doi.org/10.1371/journal.pone.0192026openalex-snapshot
Variation in grain Zn concentration, and the grain ionome, in field-grown Indian wheat
inferredcites →https://doi.org/10.1379/1466-1268(1996)001<0215:thwcap>2.3.co;2openalex-snapshot
The Hsf world: classification and properties of plant heat stress transcription factors
inferredcites →https://doi.org/10.2135/cropsci2007.04.0006ipbsopenalex-snapshot
Molecular Breeding Using a Major QTL for Fusarium Head Blight Resistance in Wheat
inferredcites →https://doi.org/10.2135/cropsci2007.09.0020ipbsopenalex-snapshot
HarvestPlus: Breeding Crops for Better Nutrition
inferredcites →https://doi.org/10.2136/sssaj1978.03615995004200030009xopenalex-snapshot
Development of a DTPA Soil Test for Zinc, Iron, Manganese, and Copper
inferredcites →https://doi.org/10.3389/fpls.2013.00281openalex-snapshot
Control of Zn uptake in Arabidopsis halleri: a balance between Zn and Fe
inferredcites →https://doi.org/10.3389/fpls.2014.00213openalex-snapshot
Comparative transcriptome analysis of the metal hyperaccumulator Noccaea caerulescens
inferredcites →https://doi.org/10.3389/fpls.2014.00438openalex-snapshot
From soil to seed: micronutrient movement into and within the plant
inferredcites →https://doi.org/10.3389/fpls.2016.01272openalex-snapshot
An Arabidopsis Zinc Finger Protein Increases Abiotic Stress Tolerance by Regulating Sodium and Potassium Homeostasis, Reactive Oxygen Species Scavenging and Osmotic Potential
inferredcites →https://doi.org/10.3389/fpls.2017.00425openalex-snapshot
Transcriptome Comparison Reveals the Adaptive Evolution of Two Contrasting Ecotypes of Zn/Cd Hyperaccumulator Sedum alfredii Hance
inferredcites →https://doi.org/10.3389/fpls.2017.01025openalex-snapshot
Transcriptomic Analysis of Soil Grown T. aestivum cv. Root to Reveal the Changes in Expression of Genes in Response to Multiple Nutrients Deficiency
inferredcites →https://doi.org/10.3389/fpls.2017.01800openalex-snapshot
QTL Mapping of Grain Zn and Fe Concentrations in Two Hexaploid Wheat RIL Populations with Ample Transgressive Segregation
inferredcites →https://doi.org/10.3389/fpls.2018.00139openalex-snapshot
Roles of E3 Ubiquitin-Ligases in Nuclear Protein Homeostasis during Plant Stress Responses
inferredcites →https://doi.org/10.3390/ijms19071900openalex-snapshot
The Arabidopsis Calcium-Dependent Protein Kinases (CDPKs) and Their Roles in Plant Growth Regulation and Abiotic Stress Responses
inferredcites →https://doi.org/10.3390/molecules23030535openalex-snapshot
Tolerance to Stress Combination in Tomato Plants: New Insights in the Protective Role of Melatonin
inferredcites →https://doi.org/10.3923/ajaps.2011.238.246openalex-snapshot
Determination of Nutritive Value, Mineral Contents and Antioxidant Activity of Some Wild Edible Plants from Meghalaya State, India
inferredcites →https://doi.org/10.3923/ajcs.2011.43.48openalex-snapshot
Variation for Grain Micronutrients Concentration in Wheat Core-collection Accessions of Diverse Origin
inferredcites →https://doi.org/10.3945/an.112.003210openalex-snapshot
Discovery of Human Zinc Deficiency: Its Impact on Human Health and Disease
inferredcites →https://doi.org/10.4161/psb.6.2.14701openalex-snapshot
Mitogen-activated protein kinase signaling in plants under abiotic stress
inferredcites →https://doi.org/10.5423/ppj.rw.08.2015.0150openalex-snapshot
Heat Shock Proteins: A Review of the Molecular Chaperones for Plant Immunity
inferredcites →https://doi.org/10.7831/ras.3.1openalex-snapshot
ROLE OF IRON IN PLANT GROWTH AND METABOLISM

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1016/j.cpb.2019.100105openalex-snapshot
Comparative transcriptomic profiling of High- and Low- grain Zinc and Iron containing Indian wheat genotypes
inferred← citeshttps://doi.org/10.3389/fgene.2020.00543openalex-snapshot
Rice Biofortification With Zinc and Selenium: A Transcriptomic Approach to Understand Mineral Accumulation in Flag Leaves
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