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Precise removal of Calm1 long 3′ UTR isoform by CRISPR-Cas9 genome editing impairs dorsal root ganglion development in mice

https://doi.org/10.1101/553990
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/bies.201300174openalex-snapshot
Alternative polyadenylation in the nervous system: To what lengths will 3′ UTR extensions take us?
inferredcites →https://doi.org/10.1002/jnr.490360112openalex-snapshot
Expression of three nonallelic genes coding calmodulin exhibits similar localization on the central nervous system of adult rats
inferredcites →https://doi.org/10.1002/neu.1013openalex-snapshot
Calmodulin and profilin coregulate axon outgrowth in Drosophila
inferredcites →https://doi.org/10.1016/0022-2836(89)90388-4openalex-snapshot
Structural organization of multiple rat calmodulin genes
inferredcites →https://doi.org/10.1016/0169-328x(92)90039-eopenalex-snapshot
Molecular cloning of calmodulin mRNA species which are preferentially expressed in neurons in the rat brain
inferredcites →https://doi.org/10.1016/0896-6273(95)90239-2openalex-snapshot
Targeted disruption of Ca2+-calmodulin signaling in Drosophila growth cones leads to stalls in axon extension and errors in axon guidance
inferredcites →https://doi.org/10.1016/j.ajhg.2012.08.015openalex-snapshot
Mutations in Calmodulin Cause Ventricular Tachycardia and Sudden Cardiac Death
inferredcites →https://doi.org/10.1016/j.bbagrm.2017.03.002openalex-snapshot
Expression of Rac1 alternative 3′ UTRs is a cell specific mechanism with a function in dendrite outgrowth in cortical neurons
inferredcites →https://doi.org/10.1016/j.bbrc.2005.10.083openalex-snapshot
Overexpression of calmodulin induces cardiac hypertrophy by a calcineurin-dependent pathway
inferredcites →https://doi.org/10.1016/j.cell.2008.05.045openalex-snapshot
Distinct Role of Long 3′ UTR BDNF mRNA in Spine Morphology and Synaptic Plasticity in Hippocampal Neurons
inferredcites →https://doi.org/10.1016/j.cell.2009.06.016openalex-snapshot
Widespread Shortening of 3′UTRs by Alternative Cleavage and Polyadenylation Activates Oncogenes in Cancer Cells
inferredcites →https://doi.org/10.1016/j.cell.2010.04.008openalex-snapshot
Transmembrane Receptor DCC Associates with Protein Synthesis Machinery and Regulates Translation
inferredcites →https://doi.org/10.1016/j.cell.2011.11.064openalex-snapshot
Local Translation of Extranuclear Lamin B Promotes Axon Maintenance
inferredcites →https://doi.org/10.1016/j.cell.2013.04.025openalex-snapshot
One-Step Generation of Mice Carrying Mutations in Multiple Genes by CRISPR/Cas-Mediated Genome Engineering
inferredcites →https://doi.org/10.1016/j.celrep.2012.01.001openalex-snapshot
Global Patterns of Tissue-Specific Alternative Polyadenylation in Drosophila
inferredcites →https://doi.org/10.1016/j.celrep.2015.11.057openalex-snapshot
FMRP-Mediated Axonal Delivery of miR-181d Regulates Axon Elongation by Locally Targeting Map1b and Calm1
inferredcites →https://doi.org/10.1016/j.celrep.2017.10.095openalex-snapshot
Widespread Translational Remodeling during Human Neuronal Differentiation
inferredcites →https://doi.org/10.1016/j.celrep.2018.10.094openalex-snapshot
Widespread Accumulation of Ribosome-Associated Isolated 3′ UTRs in Neuronal Cell Populations of the Aging Brain
inferredcites →https://doi.org/10.1016/j.jacc.2013.07.091openalex-snapshot
A Mutation in CALM1 Encoding Calmodulin in Familial Idiopathic Ventricular Fibrillation in Childhood and Adolescence
inferredcites →https://doi.org/10.1016/j.molcel.2016.01.020openalex-snapshot
Distal Alternative Last Exons Localize mRNAs to Neural Projections
inferredcites →https://doi.org/10.1016/j.neuron.2013.10.036openalex-snapshot
The Central Dogma Decentralized: New Perspectives on RNA Function and Local Translation in Neurons
inferredcites →https://doi.org/10.1016/j.neuron.2015.10.048openalex-snapshot
Widespread Differential Expression of Coding Region and 3′ UTR Sequences in Neurons and Other Tissues
inferredcites →https://doi.org/10.1016/j.neuron.2018.03.030openalex-snapshot
Alternative 3′ UTRs Modify the Localization, Regulatory Potential, Stability, and Plasticity of mRNAs in Neuronal Compartments
inferredcites →https://doi.org/10.1016/j.pcad.2008.01.003openalex-snapshot
The Role of the Autonomic Nervous System in Sudden Cardiac Death
inferredcites →https://doi.org/10.1016/s0021-9258(18)37497-0openalex-snapshot
Multiple divergent mRNAs code for a single human calmodulin.
inferredcites →https://doi.org/10.1016/s0021-9258(18)49306-4openalex-snapshot
Molecular analysis of human and rat calmodulin complementary DNA clones. Evidence for additional active genes in these species.
inferredcites →https://doi.org/10.1016/s0165-0270(96)00122-7openalex-snapshot
Hoxb-8 gain-of-function transgenic mice exhibit alterations in the peripheral nervous system
inferredcites →https://doi.org/10.1016/s0896-6273(01)00551-7openalex-snapshot
Chemotropic Responses of Retinal Growth Cones Mediated by Rapid Local Protein Synthesis and Degradation
inferredcites →https://doi.org/10.1016/s0896-6273(02)00978-9openalex-snapshot
Disruption of Dendritic Translation of CaMKIIα Impairs Stabilization of Synaptic Plasticity and Memory Consolidation
inferredcites →https://doi.org/10.1016/s0925-4773(99)00212-9openalex-snapshot
Targeted inactivation of Hoxb8 affects survival of a spinal ganglion and causes aberrant limb reflexes
inferredcites →https://doi.org/10.1038/285073a0openalex-snapshot
Calmodulin—an intracellular calcium receptor
inferredcites →https://doi.org/10.1038/nchembio.1406openalex-snapshot
Orphan nuclear receptor TR3 acts in autophagic cell death via mitochondrial signaling pathway
inferredcites →https://doi.org/10.1038/ncpcardio1082openalex-snapshot
A case of vagally mediated idiopathic ventricular fibrillation
inferredcites →https://doi.org/10.1038/nm.2687openalex-snapshot
Dendritically targeted Bdnf mRNA is essential for energy balance and response to leptin
inferredcites →https://doi.org/10.1038/nmeth.2288openalex-snapshot
Analysis of alternative cleavage and polyadenylation by 3′ region extraction and deep sequencing
inferredcites →https://doi.org/10.1038/nmeth.2406openalex-snapshot
FISH-quant: automatic counting of transcripts in 3D FISH images
inferredcites →https://doi.org/10.1038/nmeth.3319openalex-snapshot
Direct visualization of newly synthesized target proteins in situ
inferredcites →https://doi.org/10.1038/nn.2486openalex-snapshot
An NGF-responsive element targets myo-inositol monophosphatase-1 mRNA to sympathetic neuron axons
inferredcites →https://doi.org/10.1038/nrn2057openalex-snapshot
Specification and connectivity of neuronal subtypes in the sensory lineage
inferredcites →https://doi.org/10.1038/s41467-017-00690-6openalex-snapshot
RNA localization is a key determinant of neurite-enriched proteome
inferredcites →https://doi.org/10.1038/s41467-017-02099-7openalex-snapshot
Post-transcriptional 3´-UTR cleavage of mRNA transcripts generates thousands of stable uncapped autonomous RNA fragments
inferredcites →https://doi.org/10.1038/sj.emboj.7601808openalex-snapshot
Local translation and directional steering in axons
inferredcites →https://doi.org/10.1038/srep38907openalex-snapshot
CircRNA accumulation in the aging mouse brain
inferredcites →https://doi.org/10.1073/pnas.1620507114openalex-snapshot
Loss of LMOD1 impairs smooth muscle cytocontractility and causes megacystis microcolon intestinal hypoperistalsis syndrome in humans and mice
inferredcites →https://doi.org/10.1083/jcb.110.4.1295openalex-snapshot
Ca2+ transients are not required as signals for long-term neurite outgrowth from cultured sympathetic neurons.
inferredcites →https://doi.org/10.1083/jcb.201305139openalex-snapshot
RNA-based mechanisms underlying axon guidance
inferredcites →https://doi.org/10.1083/jcb.87.2.370openalex-snapshot
Effects of fasciculation on the outgrowth of neurites from spinal ganglia in culture.
inferredcites →https://doi.org/10.1093/nar/gkx675openalex-snapshot
CRISPR–Cas9-mediated functional dissection of 3′-UTRs
inferredcites →https://doi.org/10.1093/oxfordjournals.jbchem.a134019openalex-snapshot
Quantitative Determinations of Calmodulin in the Supernatant and Particulate Fractions of Mammalian Tissues1
inferredcites →https://doi.org/10.1101/gad.229328.113openalex-snapshot
Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression
inferredcites →https://doi.org/10.1101/gad.261974.115openalex-snapshot
The end of the message: multiple protein–RNA interactions define the mRNA polyadenylation site
inferredcites →https://doi.org/10.1101/gr.139733.112openalex-snapshot
Extensive alternative polyadenylation during zebrafish development
inferredcites →https://doi.org/10.1101/gr.146886.112openalex-snapshot
Widespread and extensive lengthening of 3′ UTRs in the mammalian brain
inferredcites →https://doi.org/10.1111/febs.12337openalex-snapshot
Calmodulin in a Heartbeat
inferredcites →https://doi.org/10.1126/science.1155390openalex-snapshot
Proliferating Cells Express mRNAs with Shortened 3' Untranslated Regions and Fewer MicroRNA Target Sites
inferredcites →https://doi.org/10.1126/science.1258096openalex-snapshot
The new frontier of genome engineering with CRISPR-Cas9
inferredcites →https://doi.org/10.1126/science.274.5290.1123openalex-snapshot
The Molecular Biology of Axon Guidance
inferredcites →https://doi.org/10.1126/science.aan1053openalex-snapshot
Locally translated mTOR controls axonal local translation in nerve injury
inferredcites →https://doi.org/10.1146/annurev.cb.04.110188.002111openalex-snapshot
Development of the Peripheral Nervous System from the Neural Crest
inferredcites →https://doi.org/10.1146/annurev.cellbio.4.1.375openalex-snapshot
Development Of The Peripheral Nervous System From The Neural Crest
inferredcites →https://doi.org/10.1161/atvbaha.114.305017openalex-snapshot
CRISPR-Cas9 Genome Editing of a Single Regulatory Element Nearly Abolishes Target Gene Expression in Mice—Brief Report
inferredcites →https://doi.org/10.1161/circgenetics.115.001323openalex-snapshot
Spectrum and Prevalence of CALM1 -, CALM2 -, and CALM3 -Encoded Calmodulin Variants in Long QT Syndrome and Functional Characterization of a Novel Long QT Syndrome–Associated Calmodulin Missense Variant, E141G
inferredcites →https://doi.org/10.1161/circulationaha.112.001216openalex-snapshot
Calmodulin Mutations Associated With Recurrent Cardiac Arrest in Infants
inferredcites →https://doi.org/10.1210/en.133.1.376openalex-snapshot
Targeted developmental overexpression of calmodulin induces proliferative and hypertrophic growth of cardiomyocytes in transgenic mice
inferredcites →https://doi.org/10.1210/en.2003-1119openalex-snapshot
Targeted Expression of Calmodulin Increases Ventricular Cardiomyocyte Proliferation and Deoxyribonucleic Acid Synthesis during Mouse Development
inferredcites →https://doi.org/10.1210/me.2002-0350openalex-snapshot
Pressure Overload Selectively Up-Regulates Ca2+/Calmodulin-Dependent Protein Kinase IIin Vivo
inferredcites →https://doi.org/10.1242/dev.112680openalex-snapshot
Calm1 signaling pathway is essential for the migration of mouse precerebellar neurons
inferredcites →https://doi.org/10.1242/dev.127.9.1991openalex-snapshot
Calmodulin and Son of sevenless dependent signaling pathways regulate midline crossing of axons in the Drosophila CNS
inferredcites →https://doi.org/10.1242/dev.128348openalex-snapshot
IMP2 axonal localization, RNA interactome, and function in the development of axon trajectories
inferredcites →https://doi.org/10.1261/rna.2386111openalex-snapshot
Transcriptome analysis of embryonic and adult sensory axons reveals changes in mRNA repertoire localization
inferredcites →https://doi.org/10.1371/journal.pone.0055718openalex-snapshot
HuD Promotes BDNF Expression in Brain Neurons via Selective Stabilization of the BDNF Long 3′UTR mRNA
inferredcites →https://doi.org/10.1371/journal.pone.0129457openalex-snapshot
Pervasive Genotypic Mosaicism in Founder Mice Derived from Genome Editing through Pronuclear Injection
inferredcites →https://doi.org/10.1385/mb:27:1:33openalex-snapshot
Calmodulin's Flexibility Allows for Promiscuity in Its Interactions with Target Proteins and Peptides
inferredcites →https://doi.org/10.1523/jneurosci.1800-10.2010openalex-snapshot
Subcellular Profiling Reveals Distinct and Developmentally Regulated Repertoire of Growth Cone mRNAs
inferredcites →https://doi.org/10.7554/elife.10921openalex-snapshot
Tunable protein synthesis by transcript isoforms in human cells

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11606/t.42.2019.tde-12022020-153318openalex-snapshot
Regulação pré- e pós-transcricional do gene Scratch2 durante a neurogênese no tubo neural posterior.
inferred← citeshttps://doi.org/10.11606/t.42.2020.tde-12022020-153318openalex-snapshot
Regulação pré- e pós-transcricional do gene Scratch2 durante a neurogênese no tubo neural posterior.
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