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A novel human enteroid-anaerobe co-culture system to study microbial-host interaction under physiological hypoxia
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/s00109-007-0277-zopenalex-snapshot
Hypoxia and gastrointestinal disease
inferredcites →https://doi.org/10.1007/s12013-013-9611-yopenalex-snapshot
Noninvasive Monitoring of Small Intestinal Oxygen in a Rat Model of Chronic Mesenteric Ischemia
inferredcites →https://doi.org/10.1016/j.anaerobe.2017.01.001openalex-snapshot
The role of gut microbiota in health and disease: In vitro modeling of host-microbe interactions at the aerobe-anaerobe interphase of the human gut
inferredcites →https://doi.org/10.1016/j.bbmt.2015.04.016openalex-snapshot
Intestinal Blautia Is Associated with Reduced Death from Graft-versus-Host Disease
inferredcites →https://doi.org/10.1016/j.cell.2012.01.035openalex-snapshot
The Impact of the Gut Microbiota on Human Health: An Integrative View
inferredcites →https://doi.org/10.1016/j.cell.2014.03.011openalex-snapshot
Role of the Microbiota in Immunity and Inflammation
inferredcites →https://doi.org/10.1016/j.coi.2017.07.012openalex-snapshot
Organoid culture systems to study host–pathogen interactions
inferredcites →https://doi.org/10.1016/j.freeradbiomed.2016.09.022openalex-snapshot
Oxygen as a driver of gut dysbiosis
inferredcites →https://doi.org/10.1016/j.jcmgh.2017.12.001openalex-snapshot
Engineered Human Gastrointestinal Cultures to Study the Microbiome and Infectious Diseases
inferredcites →https://doi.org/10.1016/j.ydbio.2016.09.014openalex-snapshot
Modeling infectious diseases and host-microbe interactions in gastrointestinal organoids
inferredcites →https://doi.org/10.1038/nature07935openalex-snapshot
Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche
inferredcites →https://doi.org/10.1038/nature11234openalex-snapshot
Structure, function and diversity of the healthy human microbiome
inferredcites →https://doi.org/10.1038/ncomms11535openalex-snapshot
A microfluidics-based in vitro model of the gastrointestinal human–microbe interface
inferredcites →https://doi.org/10.1038/nrgastro.2010.39openalex-snapshot
Hypoxia: an alarm signal during intestinal inflammation
inferredcites →https://doi.org/10.1038/nrgastro.2017.101openalex-snapshot
Intestinal hypoxia and hypoxia-induced signalling as therapeutic targets for IBD
inferredcites →https://doi.org/10.1038/nri.2017.103openalex-snapshot
Regulation of immunity and inflammation by hypoxia in immunological niches
inferredcites →https://doi.org/10.1038/s41586-018-0617-xopenalex-snapshot
Temporal development of the gut microbiome in early childhood from the TEDDY study
inferredcites →https://doi.org/10.1038/srep45270openalex-snapshot
A primary human macrophage-enteroid co-culture model to investigate mucosal gut physiology and host-pathogen interactions
inferredcites →https://doi.org/10.1039/c2lc40306dopenalex-snapshot
A novel microfluidic platform for high-resolution imaging of a three-dimensional cell culture under a controlled hypoxic environment
inferredcites →https://doi.org/10.1039/c3ib40188jopenalex-snapshot
Engineering of three-dimensional microenvironments to promote contractile behavior in primary intestinal organoids
inferredcites →https://doi.org/10.1053/j.gastro.2011.07.050openalex-snapshot
Long-term Expansion of Epithelial Organoids From Human Colon, Adenoma, Adenocarcinoma, and Barrett's Epithelium
inferredcites →https://doi.org/10.1053/j.gastro.2014.07.020openalex-snapshot
Correlation Between Intraluminal Oxygen Gradient and Radial Partitioning of Intestinal Microbiota
inferredcites →https://doi.org/10.1079/bjn2001340openalex-snapshot
Transcription factor NF-κB as a potential biomarker for oxidative stress
inferredcites →https://doi.org/10.1084/jem.184.3.1003openalex-snapshot
Epithelial exposure to hypoxia modulates neutrophil transepithelial migration.
inferredcites →https://doi.org/10.1084/jem.193.9.1027openalex-snapshot
Hypoxia-Inducible Factor 1–Dependent Induction of Intestinal Trefoil Factor Protects Barrier Function during Hypoxia
inferredcites →https://doi.org/10.1091/mbc.e14-07-1194openalex-snapshot
HIF-dependent regulation of claudin-1 is central to intestinal epithelial tight junction integrity
inferredcites →https://doi.org/10.1101/421404openalex-snapshot
Complex human gut microbiome cultured in anaerobic human intestine chips
inferredcites →https://doi.org/10.1111/cmi.12360openalex-snapshot
Live F aecalibacterium prausnitzii in an apical anaerobic model of the intestinal epithelial barrier
inferredcites →https://doi.org/10.1111/j.1582-4934.2011.01258.xopenalex-snapshot
Why is the partial oxygen pressure of human tissues a crucial parameter? Small molecules and hypoxia
inferredcites →https://doi.org/10.1126/science.1234852openalex-snapshot
Growing Self-Organizing Mini-Guts from a Single Intestinal Stem Cell: Mechanism and Applications
inferredcites →https://doi.org/10.1126/science.aaf5211openalex-snapshot
Replication of human noroviruses in stem cell–derived human enteroids
inferredcites →https://doi.org/10.1126/science.aao2202openalex-snapshot
Gut cell metabolism shapes the microbiome
inferredcites →https://doi.org/10.1128/aem.61.8.3069-3075.1995openalex-snapshot
Quantitative fluorescence in situ hybridization of Bifidobacterium spp. with genus-specific 16S rRNA-targeted probes and its application in fecal samples
inferredcites →https://doi.org/10.1128/iai.00282-18openalex-snapshot
Modeling Host-Pathogen Interactions in the Context of the Microenvironment: Three-Dimensional Cell Culture Comes of Age
inferredcites →https://doi.org/10.1128/jvi.01930-15openalex-snapshot
Human Intestinal Enteroids: a New Model To Study Human Rotavirus Infection, Host Restriction, and Pathophysiology
inferredcites →https://doi.org/10.1128/mbio.02289-17openalex-snapshot
The Biosynthesis of Lipooligosaccharide from Bacteroides thetaiotaomicron
inferredcites →https://doi.org/10.1152/ajplung.2000.278.2.l253openalex-snapshot
Hyperoxia synergistically increases TNF-α-induced interleukin-8 gene expression in A549 cells
inferredcites →https://doi.org/10.1161/01.res.0000069022.95401.feopenalex-snapshot
Hypoxia Enhances Ecto-5′-Nucleotidase Activity and Cell Surface Expression in Endothelial Cells
inferredcites →https://doi.org/10.1177/036319909001500129openalex-snapshot
Land, Kinship, and Consanguineous Marriage in Italy From the Seventeenth To the Nineteenth Centuries
inferredcites →https://doi.org/10.1186/1471-2180-14-133openalex-snapshot
The HMI™ module: a new tool to study the Host-Microbiota Interaction in the human gastrointestinal tract in vitro
inferredcites →https://doi.org/10.1186/1741-7007-11-61openalex-snapshot
Bacteroides thetaiotaomicron and Faecalibacterium prausnitziiinfluence the production of mucus glycans and the development of goblet cells in the colonic epithelium of a gnotobiotic model rodent
inferredcites →https://doi.org/10.1186/s40168-015-0106-5openalex-snapshot
Cultivation of stable, reproducible microbial communities from different fecal donors using minibioreactor arrays (MBRAs)
inferredcites →https://doi.org/10.1186/s40348-016-0041-yopenalex-snapshot
The impact of hypoxia on intestinal epithelial cell functions: consequences for invasion by bacterial pathogens
inferredcites →https://doi.org/10.2147/hp.s85625openalex-snapshot
Measuring oxygen levels in Caco-2 cultures
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1002/vetr.1528openalex-snapshot
Advancing animal health and disease research in the lab with three‐dimensional cell culture systems
inferred← citeshttps://doi.org/10.1007/978-1-0716-0338-3_16openalex-snapshot
Establishing Human Intestinal Enteroid/Organoid Lines from Preterm Infant and Adult Tissue
inferred← citeshttps://doi.org/10.1007/s42242-022-00210-6openalex-snapshot
Designs and methodologies to recreate in vitro human gut microbiota models
inferred← citeshttps://doi.org/10.1016/j.earlhumdev.2019.05.008openalex-snapshot
The future of probiotics in the preterm infant
inferred← citeshttps://doi.org/10.1016/j.earlhumdev.2019.104854openalex-snapshot
The role of the preterm intestinal microbiome in sepsis and necrotising enterocolitis
inferred← citeshttps://doi.org/10.1016/j.isci.2020.101878openalex-snapshot
Harnessing Tissue Engineering Tools to Interrogate Host-Microbiota Crosstalk in Cancer
inferred← citeshttps://doi.org/10.1016/j.jcmgh.2021.04.010openalex-snapshot
Creating a More Perfect Union: Modeling Intestinal Bacteria-Epithelial Interactions Using Organoids
inferred← citeshttps://doi.org/10.1016/j.lssr.2022.08.003openalex-snapshot
Looking on the horizon; potential and unique approaches to developing radiation countermeasures for deep space travel
inferred← citeshttps://doi.org/10.1016/j.medj.2020.07.001openalex-snapshot
Primary Human Colonic Mucosal Barrier Crosstalk with Super Oxygen-Sensitive Faecalibacterium prausnitzii in Continuous Culture
inferred← citeshttps://doi.org/10.1016/j.mib.2023.102362openalex-snapshot
Human intestinal organoids as models to study enteric bacteria and viruses
inferred← citeshttps://doi.org/10.1016/j.mib.2023.102379openalex-snapshot
Bacteriophage communities are a reservoir of unexplored microbial diversity in neonatal health and disease
inferred← citeshttps://doi.org/10.1016/j.tibtech.2020.07.009openalex-snapshot
In Vitro Models of Intestine Innate Immunity
inferred← citeshttps://doi.org/10.1038/s41368-025-00365-9openalex-snapshot
Physiologically relevant coculture model for oral microbial-host interactions
inferred← citeshttps://doi.org/10.1038/s41564-022-01213-wopenalex-snapshot
Strain-specific impacts of probiotics are a significant driver of gut microbiome development in very preterm infants
inferred← citeshttps://doi.org/10.1038/s41587-020-0468-5openalex-snapshot
Genetic circuit design automation for the gut resident species Bacteroides thetaiotaomicron
inferred← citeshttps://doi.org/10.1038/s41596-021-00562-wopenalex-snapshot
Coculture of primary human colon monolayer with human gut bacteria
inferred← citeshttps://doi.org/10.1080/09205063.2025.2532567openalex-snapshot
A microphysiological systems approach to design gastrointestinal system
inferred← citeshttps://doi.org/10.1080/19490976.2023.2183687openalex-snapshot
Methodological challenges in neonatal microbiome research
inferred← citeshttps://doi.org/10.1088/1758-5090/ab446eopenalex-snapshot
An in vitro intestinal platform with a self-sustaining oxygen gradient to study the human gut/microbiome interface
inferred← citeshttps://doi.org/10.1093/ecco-jcc/jjaa257openalex-snapshot
Organoid-based Models to Study the Role of Host-microbiota Interactions in IBD
inferred← citeshttps://doi.org/10.1093/femsre/fuad012openalex-snapshot
Synthetic microbial communities (SynComs) of the human gut: design, assembly, and applications
inferred← citeshttps://doi.org/10.1096/fj.202101135ropenalex-snapshot
Versatile human in vitro triple coculture model coincubated with adhered gut microbes reproducibly mimics pro‐inflammatory host‐microbe interactions in the colon
inferred← citeshttps://doi.org/10.1097/mog.0000000000000691openalex-snapshot
Stem-cell-derived models: tools for studying role of microbiota in intestinal homeostasis and disease
inferred← citeshttps://doi.org/10.1101/2020.07.16.207852openalex-snapshot
Organoid-derived adult human colonic epithelium responds to co-culture with a probiotic strain of Bifidobacterium longum
inferred← citeshttps://doi.org/10.1101/2021.03.05.433759openalex-snapshot
Dual Oxic-Anoxic Co-Culture Enables Direct Study of Host-Anaerobe Interactions at the Airway Epithelial Interface
inferred← citeshttps://doi.org/10.1101/2021.08.03.454877openalex-snapshot
Dissemination and pathogenesis of toxigenic Clostridium perfringens strains linked to neonatal intensive care units and Necrotising Enterocolitis
inferred← citeshttps://doi.org/10.1111/pim.12765openalex-snapshot
Stem cell‐derived enteroid cultures as a tool for dissecting host‐parasite interactions in the small intestinal epithelium
inferred← citeshttps://doi.org/10.1113/ep089919openalex-snapshot
Development of the gut microbiome in early life
inferred← citeshttps://doi.org/10.1128/msystems.00487-20openalex-snapshot
Biomimetic Gut Model Systems for Development of Targeted Microbial Solutions for Enhancing Warfighter Health and Performance
inferred← citeshttps://doi.org/10.1136/gutjnl-2021-326552openalex-snapshot
Distinct gene expression profiles between human preterm-derived and adult-derived intestinal organoids exposed to Enterococcus faecalis : a pilot study
inferred← citeshttps://doi.org/10.1146/annurev-cancerbio-061421-040659openalex-snapshot
Engineering the Immune Microenvironment into Organoid Models
inferred← citeshttps://doi.org/10.1152/physiolgenomics.00061.2021openalex-snapshot
Drivers of transcriptional variance in human intestinal epithelial organoids
inferred← citeshttps://doi.org/10.20517/mrr.2024.14openalex-snapshot
Faecalibacterium prausnitzii A2-165 metabolizes host- and media-derived chemicals and induces transcriptional changes in colonic epithelium in GuMI human gut microphysiological system
inferred← citeshttps://doi.org/10.3390/biomedicines12122913openalex-snapshot
Integration of Stromal Cells and Hydrogel Below Epithelium Results in Optimal Barrier Properties of Small Intestine Organoid Models
inferred← citeshttps://doi.org/10.3390/cancers15245859openalex-snapshot
Human Intestinal Organoids and Microphysiological Systems for Modeling Radiotoxicity and Assessing Radioprotective Agents
inferred← citeshttps://doi.org/10.3390/v13060999openalex-snapshot
Organoids to Dissect Gastrointestinal Virus–Host Interactions: What Have We Learned?
inferred← citeshttps://doi.org/10.59717/j.xinn-med.2024.100092openalex-snapshot
Intestinal microecology dysbiosis in inflammatory bowel disease: Pathogenesis and therapeutic strategies
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