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Role of DNA methylation dynamics in desiccation and salinity stress responses in rice cultivars

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00425-006-0469-8openalex-snapshot

Characterization of a stress responsive proteinase inhibitor gene with positive effect in improving drought resistance in rice

inferredcites →https://doi.org/10.1007/s00709-018-1265-6openalex-snapshot

Overexpression of a phospholipase (OsPLDα1) for drought tolerance in upland rice (Oryza sativa L.)

inferredcites →https://doi.org/10.1007/s11103-013-0115-3openalex-snapshot

OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice

inferredcites →https://doi.org/10.1016/j.bbagrm.2011.08.004openalex-snapshot

AP2/ERF family transcription factors in plant abiotic stress responses

inferredcites →https://doi.org/10.1016/j.bbrc.2008.07.128openalex-snapshot

Overexpression of Arabidopsis ZEP enhances tolerance to osmotic stress

inferredcites →https://doi.org/10.1016/j.cell.2007.07.007openalex-snapshot

Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation

inferredcites →https://doi.org/10.1016/j.cell.2008.03.029openalex-snapshot

Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

inferredcites →https://doi.org/10.1016/j.cell.2008.12.038openalex-snapshot

Epigenetic Reprogramming and Small RNA Silencing of Transposable Elements in Pollen

inferredcites →https://doi.org/10.1016/j.cell.2016.08.029openalex-snapshot

Abiotic Stress Signaling and Responses in Plants

inferredcites →https://doi.org/10.1016/j.molcel.2014.06.009openalex-snapshot

Mechanism of DNA Methylation-Directed Histone Methylation by KRYPTONITE

inferredcites →https://doi.org/10.1016/j.pbi.2008.12.006openalex-snapshot

Epigenetic regulation of stress responses in plants

inferredcites →https://doi.org/10.1016/j.pbi.2015.05.011openalex-snapshot

Stress-induced structural changes in plant chromatin

inferredcites →https://doi.org/10.1016/j.pbi.2016.12.007openalex-snapshot

Gene body DNA methylation in plants

inferredcites →https://doi.org/10.1016/j.plantsci.2007.09.002openalex-snapshot

Stressful “memories” of plants: Evidence and possible mechanisms

inferredcites →https://doi.org/10.1016/j.tplants.2010.01.002openalex-snapshot

siRNAs and DNA methylation: seedy epigenetics

inferredcites →https://doi.org/10.1034/j.1399-3054.2001.1120202.xopenalex-snapshot

Abiotic stress signal transduction in plants: Molecular and genetic perspectives

inferredcites →https://doi.org/10.1038/nature06745openalex-snapshot

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

inferredcites →https://doi.org/10.1038/ng1929openalex-snapshot

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription

inferredcites →https://doi.org/10.1038/nrg2651openalex-snapshot

Rethinking how DNA methylation patterns are maintained

inferredcites →https://doi.org/10.1038/nrg2719openalex-snapshot

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

inferredcites →https://doi.org/10.1038/nrm2640openalex-snapshot

Epigenetic inheritance during the cell cycle

inferredcites →https://doi.org/10.1038/nsmb.2735openalex-snapshot

Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis

inferredcites →https://doi.org/10.1038/s41598-018-27979-wopenalex-snapshot

Genome-wide bisulphite-sequencing reveals organ-specific methylation patterns in chickpea

inferredcites →https://doi.org/10.1038/srep14922openalex-snapshot

Divergent DNA methylation patterns associated with gene expression in rice cultivars with contrasting drought and salinity stress response

inferredcites →https://doi.org/10.1038/srep23719openalex-snapshot

Transcriptome analysis in different rice cultivars provides novel insights into desiccation and salinity stress responses

inferredcites →https://doi.org/10.1042/bj20070734openalex-snapshot

A stress-induced rice (Oryza sativa L.) β-glucosidase represents a new subfamily of glycosyl hydrolase family 5 containing a fascin-like domain

inferredcites →https://doi.org/10.1046/j.1365-3040.2000.00527.xopenalex-snapshot

Compatibility of glycinebetaine in rice plants: evaluation using transgenic rice plants with a gene for peroxisomal betaine aldehyde dehydrogenase from barley

inferredcites →https://doi.org/10.1046/j.1365-313x.2003.01819.xopenalex-snapshot

Overexpression of a stress‐inducible aldehyde dehydrogenase gene from Arabidopsis thaliana in transgenic plants improves stress tolerance

inferredcites →https://doi.org/10.1073/pnas.0401572101openalex-snapshot

Overexpression of a zinc-finger protein gene from rice confers tolerance to cold, dehydration, and salt stress in transgenic tobacco

inferredcites →https://doi.org/10.1073/pnas.1009695107openalex-snapshot

Local DNA hypomethylation activates genes in rice endosperm

inferredcites →https://doi.org/10.1073/pnas.1604666113openalex-snapshot

On the origin and evolutionary consequences of gene body DNA methylation

inferredcites →https://doi.org/10.1073/pnas.162371599openalex-snapshot

Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes

inferredcites →https://doi.org/10.1080/07352680590910410openalex-snapshot

Drought and Salt Tolerance in Plants

inferredcites →https://doi.org/10.1093/bioinformatics/btr167openalex-snapshot

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

inferredcites →https://doi.org/10.1093/genetics/163.3.1109openalex-snapshot

Arabidopsis MET1 Cytosine Methyltransferase Mutants

inferredcites →https://doi.org/10.1093/jxb/erl164openalex-snapshot

Gene networks involved in drought stress response and tolerance

inferredcites →https://doi.org/10.1093/jxb/erq391openalex-snapshot

Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.)

inferredcites →https://doi.org/10.1093/jxb/erw066openalex-snapshot

Transgenerational response to stress in plants and its application for breeding

inferredcites →https://doi.org/10.1093/mp/ssq014openalex-snapshot

Transgenerational Inheritance and Resetting of Stress-Induced Loss of Epigenetic Gene Silencing in Arabidopsis

inferredcites →https://doi.org/10.1093/pcp/pcu054openalex-snapshot

A Novel Maize Homeodomain–Leucine Zipper (HD-Zip) I Gene, Zmhdz10, Positively Regulates Drought and Salt Tolerance in Both Rice and Arabidopsis

inferredcites →https://doi.org/10.1093/pcp/pcu059openalex-snapshot

Induced and Constitutive DNA Methylation in a Salinity-Tolerant Wheat Introgression Line

inferredcites →https://doi.org/10.1101/gad.524609openalex-snapshot

Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes

inferredcites →https://doi.org/10.1104/pp.108.128199openalex-snapshot

Characterization of OsbZIP23 as a Key Player of the Basic Leucine Zipper Transcription Factor Family for Conferring Abscisic Acid Sensitivity and Salinity and Drought Tolerance in Rice

inferredcites →https://doi.org/10.1104/pp.109.137554openalex-snapshot

Overexpression of the Transcription FactorAP37in Rice Improves Grain Yield under Drought Conditions

inferredcites →https://doi.org/10.1111/j.1365-313x.2009.03835.xopenalex-snapshot

Stress‐induced changes in the Arabidopsis thaliana transcriptome analyzed using whole‐genome tiling arrays

inferredcites →https://doi.org/10.1111/nph.14421openalex-snapshot

Divergent cytosine DNA methylation patterns in single‐cell, soybean root hairs

inferredcites →https://doi.org/10.1111/pce.13437openalex-snapshot

Phosphatidylinositol‐hydrolyzing phospholipase C4 modulates rice response to salt and drought

inferredcites →https://doi.org/10.1111/tpj.13489openalex-snapshot

H3K23me1 is an evolutionarily conserved histone modification associated with CG DNA methylation in Arabidopsis

inferredcites →https://doi.org/10.1126/science.1059745openalex-snapshot

Requirement of CHROMOMETHYLASE3 for Maintenance of CpXpG Methylation

inferredcites →https://doi.org/10.1126/science.1186366openalex-snapshot

Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation

inferredcites →https://doi.org/10.1186/1471-2156-15-s1-s9openalex-snapshot

Single-base-resolution methylomes of populus trichocarpa reveal the association between DNA methylation and drought stress

inferredcites →https://doi.org/10.1186/1472-6750-11-16openalex-snapshot

Identification of gliadin-binding peptides by phage display

inferredcites →https://doi.org/10.1186/s12870-018-1521-0openalex-snapshot

Salt-inducible expression of OsJAZ8 improves resilience against salt-stress

inferredcites →https://doi.org/10.1186/s12896-016-0261-1openalex-snapshot

Over-expression of a NAC 67 transcription factor from finger millet (Eleusine coracana L.) confers tolerance against salinity and drought stress in rice

inferredcites →https://doi.org/10.1371/journal.pone.0009514openalex-snapshot

Transgenerational Adaptation of Arabidopsis to Stress Requires DNA Methylation and the Function of Dicer-Like Proteins

inferredcites →https://doi.org/10.1371/journal.pone.0030619openalex-snapshot

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

inferredcites →https://doi.org/10.2174/1389203717666160724194653openalex-snapshot

Epigenetic Signals on Plant Adaptation: a Biotic Stress Perspective

inferredcites →https://doi.org/10.3390/epigenomes1020010openalex-snapshot

DNA Methylation in Rice and Relevance for Breeding

inferredcites →https://doi.org/10.3390/epigenomes2020010openalex-snapshot

The Epigenetic Landscape of Pancreatic Cancer Stem Cells

inferredcites →https://doi.org/10.3390/ijms19061634openalex-snapshot

Revisiting the Role of Plant Transcription Factors in the Battle against Abiotic Stress

inferredcites →https://doi.org/10.4161/psb.5.8.12227openalex-snapshot

Transgenerational response to stress inArabidopsis thaliana

inferredcites →https://doi.org/10.4238/gmr.15018299openalex-snapshot

Salt stress alters DNA methylation levels in alfalfa (Medicago spp)

inferredcites →https://doi.org/10.4238/gmr16029673openalex-snapshot

Genome-wide analysis of salinity-stress induced DNA methylation alterations in cotton (Gossypium hirsutum L.) using the Me-DIP sequencing technology

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s11033-021-06922-9openalex-snapshot

Epigenetic regulation of salinity stress responses in cereals

inferred← citeshttps://doi.org/10.1016/j.envexpbot.2024.105688openalex-snapshot

Epigenetic regulations under plant stress: A cereals perspective

inferred← citeshttps://doi.org/10.1016/j.jplph.2019.05.007openalex-snapshot

Changes in DNA methylation pattern of apple long-term in vitro shoot culture and acclimatized plants

inferred← citeshttps://doi.org/10.1111/mec.17089openalex-snapshot

The role of salinity on genome‐wide DNA methylation dynamics in European sea bass gills

inferred← citeshttps://doi.org/10.1186/s12864-020-6722-xopenalex-snapshot

MethGET: web-based bioinformatics software for correlating genome-wide DNA methylation and gene expression

inferred← citeshttps://doi.org/10.3390/epigenomes9040046openalex-snapshot

Epigenetic Regulation of Salt Stress Responses in Rice: Mechanisms and Prospects for Enhancing Tolerance

inferred← citeshttps://doi.org/10.3390/ijms21186849openalex-snapshot

Hypermethylation of Auxin-Responsive Motifs in the Promoters of the Transcription Factor Genes Accompanies the Somatic Embryogenesis Induction in Arabidopsis

inferred← citeshttps://doi.org/10.54598/001410openalex-snapshot

Genetic stability and epigenetic changes of in vitro cultivated apple (Malus × domestica Borkh.)

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