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Complex polymorphic genetic architecture underlies trans -regulatory variation among strains of Saccharomyces cerevisiae

https://doi.org/10.1101/566653
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/0040-5809(84)90017-0openalex-snapshot
Heritable genetic variation via mutation-selection balance: Lerch's zeta meets the abdominal bristle
inferredcites →https://doi.org/10.1016/0092-8674(84)90255-1openalex-snapshot
Molecular coevolution: DNA divergence and the maintenance of function
inferredcites →https://doi.org/10.1016/j.bbadis.2014.04.024openalex-snapshot
From genome to function by studying eQTLs
inferredcites →https://doi.org/10.1016/j.cell.2017.05.038openalex-snapshot
An Expanded View of Complex Traits: From Polygenic to Omnigenic
inferredcites →https://doi.org/10.1016/j.pbi.2012.01.005openalex-snapshot
Lessons from eQTL mapping studies: non-coding regions and their role behind natural phenotypic variation in plants
inferredcites →https://doi.org/10.1016/j.tig.2006.06.002openalex-snapshot
Natural selection on gene expression
inferredcites →https://doi.org/10.1016/j.tig.2008.06.001openalex-snapshot
Revealing the architecture of gene regulation: the promise of eQTL studies
inferredcites →https://doi.org/10.1016/j.tig.2010.10.006openalex-snapshot
The study of eQTL variations by RNA-seq: from SNPs to phenotypes
inferredcites →https://doi.org/10.1016/j.tplants.2007.11.008openalex-snapshot
Identifying the molecular basis of QTLs: eQTLs add a new dimension
inferredcites →https://doi.org/10.1016/j.tree.2012.01.016openalex-snapshot
A model of developmental evolution: selection, pleiotropy and compensation
inferredcites →https://doi.org/10.1017/s0016672300016037openalex-snapshot
The maintenance of genetic variability by mutation in a polygenic character with linked loci
inferredcites →https://doi.org/10.1017/s0016672300023156openalex-snapshot
The maintenance of polygenic variation through a balance between mutation and stabilizing selection
inferredcites →https://doi.org/10.1017/s0016672300028378openalex-snapshot
The divergence of a polygenic system subject to stabilizing selection, mutation and drift
inferredcites →https://doi.org/10.1038/nature01434openalex-snapshot
Genetics of gene expression surveyed in maize, mouse and man
inferredcites →https://doi.org/10.1038/nature02698openalex-snapshot
Evolutionary changes in cis and trans gene regulation
inferredcites →https://doi.org/10.1038/nature03865openalex-snapshot
Genetic interactions between polymorphisms that affect gene expression in yeast
inferredcites →https://doi.org/10.1038/nature08923openalex-snapshot
Dissection of genetically complex traits with extremely large pools of yeast segregants
inferredcites →https://doi.org/10.1038/nature12904openalex-snapshot
Genetics of single-cell protein abundance variation in large yeast populations
inferredcites →https://doi.org/10.1038/nature14244openalex-snapshot
Selection on noise constrains variation in a eukaryotic promoter
inferredcites →https://doi.org/10.1038/ng1222openalex-snapshot
Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors
inferredcites →https://doi.org/10.1038/ng1554openalex-snapshot
The transcriptional consequences of mutation and natural selection in Caenorhabditis elegans
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
inferredcites →https://doi.org/10.1038/nrg3803openalex-snapshot
Sequencing pools of individuals — mining genome-wide polymorphism data without big funding
inferredcites →https://doi.org/10.1038/nrg3891openalex-snapshot
The role of regulatory variation in complex traits and disease
inferredcites →https://doi.org/10.1038/s41586-018-0030-5openalex-snapshot
Genome evolution across 1,011 Saccharomyces cerevisiae isolates
inferredcites →https://doi.org/10.1038/sj.hdy.6801000openalex-snapshot
Evaluating the role of natural selection in the evolution of gene regulation
inferredcites →https://doi.org/10.1038/srep21849openalex-snapshot
Natural variation in non-coding regions underlying phenotypic diversity in budding yeast
inferredcites →https://doi.org/10.1046/j.1525-142x.2001.003002109.xopenalex-snapshot
Developmental system drift and flexibility in evolutionary trajectories
inferredcites →https://doi.org/10.1073/pnas.0408709102openalex-snapshot
The landscape of genetic complexity across 5,700 gene expression traits in yeast
inferredcites →https://doi.org/10.1073/pnas.0805160105openalex-snapshot
Dominance and the evolutionary accumulation of cis - and trans -effects on gene expression
inferredcites →https://doi.org/10.1073/pnas.0812009106openalex-snapshot
Optimization of gene expression by natural selection
inferredcites →https://doi.org/10.1073/pnas.1503027112openalex-snapshot
Association mapping reveals the role of purifying selection in the maintenance of genomic variation in gene expression
inferredcites →https://doi.org/10.1073/pnas.1717421114openalex-snapshot
High-resolution mapping of cis -regulatory variation in budding yeast
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btr589openalex-snapshot
PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)
inferredcites →https://doi.org/10.1093/gbe/evt072openalex-snapshot
RNA-Seq Analysis of Allele-Specific Expression, Hybrid Effects, and Regulatory Divergence in Hybrids Compared with Their Parents from Natural Populations
inferredcites →https://doi.org/10.1093/gbe/evx035openalex-snapshot
Evolutionary Dynamics of Regulatory Changes Underlying Gene Expression Divergence among Saccharomyces Species
inferredcites →https://doi.org/10.1093/molbev/msp171openalex-snapshot
Roles of Trans and Cis Variation in Yeast Intraspecies Evolution of Gene Expression
inferredcites →https://doi.org/10.1093/molbev/mst114openalex-snapshot
Inheritance of Gene Expression Level and Selective Constraints on Trans- and Cis-Regulatory Changes in Yeast
inferredcites →https://doi.org/10.1093/molbev/msw011openalex-snapshot
Contrasting Frequencies and Effects ofcis- andtrans-Regulatory Mutations Affecting Gene Expression
inferredcites →https://doi.org/10.1093/molbev/msw281openalex-snapshot
MBE Citation Classics (2017 Edition)
inferredcites →https://doi.org/10.1093/molbev/msx151openalex-snapshot
Deciphering the Genic Basis of Yeast Fitness Variation by Simultaneous Forward and Reverse Genetics
inferredcites →https://doi.org/10.1093/molbev/msx224openalex-snapshot
Fitness Effects of Cis-Regulatory Variants in the Saccharomyces cerevisiae TDH3 Promoter
inferredcites →https://doi.org/10.1098/rstb.2012.0362openalex-snapshot
Expression quantitative trait loci: present and future
inferredcites →https://doi.org/10.1101/gr.101576.109openalex-snapshot
Natural selection on cis and trans regulation in yeasts
inferredcites →https://doi.org/10.1101/gr.116731.110openalex-snapshot
Revealing the genetic structure of a trait by sequencing a population under selection
inferredcites →https://doi.org/10.1101/gr.142281.112openalex-snapshot
Extensive compensatory cis-trans regulation in the evolution of mouse gene expression
inferredcites →https://doi.org/10.1101/gr.163014.113openalex-snapshot
Tempo and mode of regulatory evolution in Drosophila
inferredcites →https://doi.org/10.1101/gr.170506.113openalex-snapshot
Heritability and genetic basis of protein level variation in an outbred population
inferredcites →https://doi.org/10.1101/gr.195743.115openalex-snapshot
Gene regulation and speciation in house mice
inferredcites →https://doi.org/10.1101/gr.209759.116openalex-snapshot
High-throughput allele-specific expression across 250 environmental conditions
inferredcites →https://doi.org/10.1101/gr.6328907openalex-snapshot
Expression evolution in yeast genes of single-input modules is mainly due to changes in trans-acting factors
inferredcites →https://doi.org/10.1105/tpc.104.027839openalex-snapshot
Allele-Specific Assay Reveals Functional Variation in theChalcone SynthasePromoter ofArabidopsis thalianaThat Is Compatible with Neutral Evolution
inferredcites →https://doi.org/10.1111/j.0014-3820.2000.tb00544.xopenalex-snapshot
PERSPECTIVE: EVOLUTIONARY DEVELOPMENTAL BIOLOGY AND THE PROBLEM OF VARIATION
inferredcites →https://doi.org/10.1111/j.1567-1364.2009.00583.xopenalex-snapshot
Generation of a large set of genetically tractable haploid and diploidSaccharomyces strains
inferredcites →https://doi.org/10.1111/nph.13888openalex-snapshot
Dissection of expression‐quantitative trait locus and allele specificity using a haploid/diploid plant system – insights into compensatory evolution of transcriptional regulation within populations
inferredcites →https://doi.org/10.1126/science.1069516openalex-snapshot
Genetic Dissection of Transcriptional Regulation in Budding Yeast
inferredcites →https://doi.org/10.1126/science.1140247openalex-snapshot
Genetic Properties Influencing the Evolvability of Gene Expression
inferredcites →https://doi.org/10.1126/science.1241459openalex-snapshot
Genomically Recoded Organisms Expand Biological Functions
inferredcites →https://doi.org/10.1371/journal.pbio.0060083openalex-snapshot
Gene–Environment Interaction in Yeast Gene Expression
inferredcites →https://doi.org/10.1371/journal.pcbi.1001120openalex-snapshot
The Morphology of the Rat Vibrissal Array: A Model for Quantifying Spatiotemporal Patterns of Whisker-Object Contact
inferredcites →https://doi.org/10.1371/journal.pcbi.1002255openalex-snapshot
The Statistics of Bulk Segregant Analysis Using Next Generation Sequencing
inferredcites →https://doi.org/10.1371/journal.pgen.0010025openalex-snapshot
Local Regulatory Variation in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1371/journal.pgen.1000940openalex-snapshot
Linkage and Association Mapping of Arabidopsis thaliana Flowering Time in Nature
inferredcites →https://doi.org/10.1371/journal.pgen.1002432openalex-snapshot
Tempo and Mode in Evolution of Transcriptional Regulation
inferredcites →https://doi.org/10.1371/journal.pgen.1002497openalex-snapshot
Contrasting Properties of Gene-Specific Regulatory, Coding, and Copy Number Mutations in Saccharomyces cerevisiae: Frequency, Effects, and Dominance
inferredcites →https://doi.org/10.1371/journal.pgen.1002570openalex-snapshot
Genetic Architecture of Highly Complex Chemical Resistance Traits across Four Yeast Strains
inferredcites →https://doi.org/10.1371/journal.pgen.1004857openalex-snapshot
The Genetic and Mechanistic Basis for Variation in Gene Regulation
inferredcites →https://doi.org/10.1371/journal.pgen.1004883openalex-snapshot
Temperature Stress Mediates Decanalization and Dominance of Gene Expression in Drosophila melanogaster
inferredcites →https://doi.org/10.1371/journal.pone.0083547openalex-snapshot
Intra-Specific Regulatory Variation in Drosophila pseudoobscura
inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot
Cutadapt removes adapter sequences from high-throughput sequencing reads
inferredcites →https://doi.org/10.1534/g3.111.001826openalex-snapshot
FASTER MT: Isolation of Pure Populations ofaand α Ascospores fromSaccharomycescerevisiae
inferredcites →https://doi.org/10.1534/g3.114.011783openalex-snapshot
Mapping Small Effect Mutations in Saccharomyces cerevisiae : Impacts of Experimental Design and Mutational Properties
inferredcites →https://doi.org/10.1534/genetics.108.098459openalex-snapshot
Cis -regulatory Variation Is Typically Polyallelic in Drosophila
inferredcites →https://doi.org/10.1534/genetics.109.103499openalex-snapshot
Global Analysis of Allele-Specific Expression in Arabidopsis thaliana
inferredcites →https://doi.org/10.1534/genetics.113.155515openalex-snapshot
High-Resolution Mapping of Complex Traits with a Four-Parent Advanced Intercross Yeast Population
inferredcites →https://doi.org/10.1534/genetics.115.177246openalex-snapshot
Discovering Single Nucleotide Polymorphisms Regulating Human Gene Expression Using Allele Specific Expression from RNA-seq Data
inferredcites →https://doi.org/10.48550/arxiv.1207.3907openalex-snapshot
Haplotype-based variant detection from short-read sequencing
inferredcites →https://doi.org/10.7554/elife.34110openalex-snapshot
A novel source of arterial valve cells linked to bicuspid aortic valve without raphe in mice
inferredcites →https://doi.org/10.7554/elife.35471openalex-snapshot
Genetics of trans-regulatory variation in gene expression
inferredcites →https://doi.org/10.7554/elife.37272openalex-snapshot
Fitness effects of altering gene expression noise in Saccharomyces cerevisiae

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inferred← citeshttps://doi.org/10.1016/j.tig.2019.09.008openalex-snapshot
Compensatory Evolution of Gene Expression
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